RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
FDFT1-219ENST00000531249 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
FDFT1-219ENST00000531249 CD164Q04900 197 aa7.75□□□□□ -1.17
FDFT1-219ENST00000531249 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
FDFT1-219ENST00000531249 IGKV4-1P06312 121 aa7.71□□□□□ -1.18
FDFT1-219ENST00000531249 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
FDFT1-219ENST00000531249 SS18L2Q9UHA2 77 aa7.68□□□□□ -1.18
FDFT1-219ENST00000531249 LPAP08519 4548 aa7.67□□□□□ -1.18
FDFT1-219ENST00000531249 TMEM258P61165 79 aa7.66□□□□□ -1.18
FDFT1-219ENST00000531249 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
FDFT1-219ENST00000531249 Q5XG85 94 aa7.65□□□□□ -1.18
FDFT1-219ENST00000531249 A0A087WSZ3 146 aa7.64□□□□□ -1.19
FDFT1-219ENST00000531249 LRP2P98164 4655 aa7.63□□□□□ -1.19
FDFT1-219ENST00000531249 J3KT08 172 aa7.63□□□□□ -1.19
FDFT1-219ENST00000531249 DSCR10P59022 87 aa7.63□□□□□ -1.19
FDFT1-219ENST00000531249 NDUFC1O43677 76 aa7.62□□□□□ -1.19
FDFT1-219ENST00000531249 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
FDFT1-219ENST00000531249 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
FDFT1-219ENST00000531249 Q8N9L7 120 aa7.62□□□□□ -1.19
FDFT1-219ENST00000531249 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
FDFT1-219ENST00000531249 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
FDFT1-219ENST00000531249 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
FDFT1-219ENST00000531249 HCG22E2RYF7 251 aa7.58□□□□□ -1.2
FDFT1-219ENST00000531249 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
FDFT1-219ENST00000531249 K7EQZ3 153 aa7.57□□□□□ -1.2
FDFT1-219ENST00000531249 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
FDFT1-219ENST00000531249 RPS28P62857 69 aaKnown RBP7.56□□□□□ -1.2
FDFT1-219ENST00000531249 LINC00472Q9H8W2 130 aa7.56□□□□□ -1.2
FDFT1-219ENST00000531249 A8MWP4 228 aa7.55□□□□□ -1.2
FDFT1-219ENST00000531249 NDUFB1O75438 58 aa7.54□□□□□ -1.2
FDFT1-219ENST00000531249 TMEM254Q8TBM7 123 aa7.54□□□□□ -1.2
FDFT1-219ENST00000531249 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
FDFT1-219ENST00000531249 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
FDFT1-219ENST00000531249 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
FDFT1-219ENST00000531249 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
FDFT1-219ENST00000531249 H7BZZ5 65 aa7.51□□□□□ -1.21
FDFT1-219ENST00000531249 C5orf47Q569G3 176 aa7.51□□□□□ -1.21
FDFT1-219ENST00000531249 Q96NJ1 140 aa7.51□□□□□ -1.21
FDFT1-219ENST00000531249 A0A0U1RQV1 116 aa7.5□□□□□ -1.21
FDFT1-219ENST00000531249 FAM236DA0A1B0GTK5 79 aa7.5□□□□□ -1.21
FDFT1-219ENST00000531249 FAM236CP0DP71 79 aa7.5□□□□□ -1.21
FDFT1-219ENST00000531249 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
FDFT1-219ENST00000531249 DEFB116Q30KQ4 102 aa7.49□□□□□ -1.21
FDFT1-219ENST00000531249 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
FDFT1-219ENST00000531249 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
FDFT1-219ENST00000531249 XP32Q5T750 250 aa7.46□□□□□ -1.22
FDFT1-219ENST00000531249 H3BPC8 53 aa7.45□□□□□ -1.22
FDFT1-219ENST00000531249 MP68P56378 58 aa7.45□□□□□ -1.22
FDFT1-219ENST00000531249 WFDC13Q8IUB5 93 aa7.44□□□□□ -1.22
FDFT1-219ENST00000531249 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
FDFT1-219ENST00000531249 TP53AIP1Q9HCN2 124 aa7.41□□□□□ -1.22
FDFT1-219ENST00000531249 MUC17Q685J3 4493 aa7.4□□□□□ -1.22
FDFT1-219ENST00000531249 MMP24-AS1A0A0U1RRL7 71 aa7.4□□□□□ -1.22
FDFT1-219ENST00000531249 A0A1B0GVX0 72 aa7.4□□□□□ -1.22
FDFT1-219ENST00000531249 hDV103S1A0JD37 113 aa7.4□□□□□ -1.22
FDFT1-219ENST00000531249 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
FDFT1-219ENST00000531249 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
FDFT1-219ENST00000531249 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
FDFT1-219ENST00000531249 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
FDFT1-219ENST00000531249 C8orf87E5RJ46 101 aa7.34□□□□□ -1.23
FDFT1-219ENST00000531249 H0Y9P7 68 aa7.34□□□□□ -1.23
FDFT1-219ENST00000531249 LINC00313P59037 77 aa7.34□□□□□ -1.23
FDFT1-219ENST00000531249 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
FDFT1-219ENST00000531249 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
FDFT1-219ENST00000531249 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
FDFT1-219ENST00000531249 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
FDFT1-219ENST00000531249 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
FDFT1-219ENST00000531249 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
FDFT1-219ENST00000531249 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
FDFT1-219ENST00000531249 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
FDFT1-219ENST00000531249 Q75L30 129 aa7.28□□□□□ -1.24
FDFT1-219ENST00000531249 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
FDFT1-219ENST00000531249 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
FDFT1-219ENST00000531249 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
FDFT1-219ENST00000531249 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
FDFT1-219ENST00000531249 A8MUU9 505 aa7.26□□□□□ -1.25
FDFT1-219ENST00000531249 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
FDFT1-219ENST00000531249 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
FDFT1-219ENST00000531249 MUC2Q02817 5179 aa7.25□□□□□ -1.25
FDFT1-219ENST00000531249 NDUFS5O43920 106 aa7.25□□□□□ -1.25
FDFT1-219ENST00000531249 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
FDFT1-219ENST00000531249 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
FDFT1-219ENST00000531249 Q8N9P0 234 aaPredicted RBP7.14□□□□□ -1.27
FDFT1-219ENST00000531249 V9GYY9 64 aa7.09□□□□□ -1.27
FDFT1-219ENST00000531249 C4orf26Q17RF5 130 aa7.07□□□□□ -1.28
FDFT1-219ENST00000531249 Q1T7F1 81 aa7.05□□□□□ -1.28
FDFT1-219ENST00000531249 Q5W150 140 aa7.05□□□□□ -1.28
FDFT1-219ENST00000531249 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
FDFT1-219ENST00000531249 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
FDFT1-219ENST00000531249 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
FDFT1-219ENST00000531249 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
FDFT1-219ENST00000531249 COA5Q86WW8 74 aa7□□□□□ -1.29
FDFT1-219ENST00000531249 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
FDFT1-219ENST00000531249 SPINK7P58062 85 aa6.98□□□□□ -1.29
FDFT1-219ENST00000531249 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
FDFT1-219ENST00000531249 ACYP2P14621 99 aa6.97□□□□□ -1.29
FDFT1-219ENST00000531249 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
FDFT1-219ENST00000531249 HRES1P13985 223 aa6.95□□□□□ -1.3
FDFT1-219ENST00000531249 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
FDFT1-219ENST00000531249 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms