RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
USP35-204ENST00000530267 A0A1B0GVX0 72 aa8.9□□□□□ -0.99
USP35-204ENST00000530267 NDUFS5O43920 106 aa8.88□□□□□ -0.99
USP35-204ENST00000530267 KRTAP13-2Q52LG2 175 aa8.86□□□□□ -0.99
USP35-204ENST00000530267 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
USP35-204ENST00000530267 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
USP35-204ENST00000530267 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
USP35-204ENST00000530267 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
USP35-204ENST00000530267 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
USP35-204ENST00000530267 SEC61GP60059 68 aa8.82□□□□□ -1
USP35-204ENST00000530267 V9GYY9 64 aa8.81□□□□□ -1
USP35-204ENST00000530267 CD164Q04900 197 aa8.8□□□□□ -1
USP35-204ENST00000530267 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
USP35-204ENST00000530267 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
USP35-204ENST00000530267 BRK1Q8WUW1 75 aa8.78□□□□□ -1
USP35-204ENST00000530267 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
USP35-204ENST00000530267 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
USP35-204ENST00000530267 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1.01
USP35-204ENST00000530267 PCOTHQ58A44 107 aa8.76□□□□□ -1.01
USP35-204ENST00000530267 MPLKIPQ8TAP9 179 aa8.76□□□□□ -1.01
USP35-204ENST00000530267 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
USP35-204ENST00000530267 H3BPC8 53 aa8.76□□□□□ -1.01
USP35-204ENST00000530267 KMT2CQ8NEZ4 4911 aaKnown RBP8.76□□□□□ -1.01
USP35-204ENST00000530267 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
USP35-204ENST00000530267 FAT1Q14517 4588 aa8.71□□□□□ -1.02
USP35-204ENST00000530267 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
USP35-204ENST00000530267 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
USP35-204ENST00000530267 RYR2Q92736 4967 aa8.7□□□□□ -1.02
USP35-204ENST00000530267 Q5W150 140 aa8.69□□□□□ -1.02
USP35-204ENST00000530267 LINC00313P59037 77 aa8.68□□□□□ -1.02
USP35-204ENST00000530267 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
USP35-204ENST00000530267 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
USP35-204ENST00000530267 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
USP35-204ENST00000530267 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
USP35-204ENST00000530267 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
USP35-204ENST00000530267 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
USP35-204ENST00000530267 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
USP35-204ENST00000530267 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
USP35-204ENST00000530267 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
USP35-204ENST00000530267 Q1T7F1 81 aa8.6□□□□□ -1.03
USP35-204ENST00000530267 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
USP35-204ENST00000530267 SPINK1P00995 79 aa8.58□□□□□ -1.04
USP35-204ENST00000530267 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
USP35-204ENST00000530267 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
USP35-204ENST00000530267 COA5Q86WW8 74 aa8.55□□□□□ -1.04
USP35-204ENST00000530267 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
USP35-204ENST00000530267 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
USP35-204ENST00000530267 PSPHP1O15172 72 aa8.54□□□□□ -1.04
USP35-204ENST00000530267 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
USP35-204ENST00000530267 PMAIP1Q13794 54 aa8.52□□□□□ -1.05
USP35-204ENST00000530267 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
USP35-204ENST00000530267 RYR3Q15413 4870 aa8.48□□□□□ -1.05
USP35-204ENST00000530267 HRES1P13985 223 aa8.46□□□□□ -1.05
USP35-204ENST00000530267 A8MUN3 132 aa8.45□□□□□ -1.06
USP35-204ENST00000530267 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
USP35-204ENST00000530267 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
USP35-204ENST00000530267 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
USP35-204ENST00000530267 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
USP35-204ENST00000530267 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
USP35-204ENST00000530267 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
USP35-204ENST00000530267 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
USP35-204ENST00000530267 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
USP35-204ENST00000530267 Q5VV11 94 aa8.37□□□□□ -1.07
USP35-204ENST00000530267 HSPG2P98160 4391 aa8.36□□□□□ -1.07
USP35-204ENST00000530267 ACYP2P14621 99 aa8.34□□□□□ -1.07
USP35-204ENST00000530267 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
USP35-204ENST00000530267 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
USP35-204ENST00000530267 A8MU10 97 aa8.31□□□□□ -1.08
USP35-204ENST00000530267 CHKB-CPT1BH3BT56 60 aa8.3□□□□□ -1.08
USP35-204ENST00000530267 Q5VSD8 79 aa8.3□□□□□ -1.08
USP35-204ENST00000530267 Q8N1X5 172 aa8.28□□□□□ -1.08
USP35-204ENST00000530267 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
USP35-204ENST00000530267 RYR1P21817 5038 aa8.27□□□□□ -1.09
USP35-204ENST00000530267 TNXBP22105 4242 aa8.26□□□□□ -1.09
USP35-204ENST00000530267 KIAA1109Q2LD37 5005 aa8.26□□□□□ -1.09
USP35-204ENST00000530267 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
USP35-204ENST00000530267 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
USP35-204ENST00000530267 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
USP35-204ENST00000530267 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
USP35-204ENST00000530267 Q75L30 129 aa8.23□□□□□ -1.09
USP35-204ENST00000530267 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
USP35-204ENST00000530267 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
USP35-204ENST00000530267 A8MUU9 505 aa8.21□□□□□ -1.1
USP35-204ENST00000530267 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
USP35-204ENST00000530267 A6NED7 52 aa8.2□□□□□ -1.1
USP35-204ENST00000530267 LCA10Q71F78 164 aa8.19□□□□□ -1.1
USP35-204ENST00000530267 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
USP35-204ENST00000530267 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
USP35-204ENST00000530267 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
USP35-204ENST00000530267 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
USP35-204ENST00000530267 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
USP35-204ENST00000530267 SPINK7P58062 85 aa8.13□□□□□ -1.11
USP35-204ENST00000530267 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
USP35-204ENST00000530267 A6NN06 94 aa8.1□□□□□ -1.11
USP35-204ENST00000530267 A0A1B0GU69 56 aa8.07□□□□□ -1.12
USP35-204ENST00000530267 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
USP35-204ENST00000530267 MT1HL1P0DM35 61 aa8□□□□□ -1.13
USP35-204ENST00000530267 XP32Q5T750 250 aa7.97□□□□□ -1.13
USP35-204ENST00000530267 RPL37P61927 97 aaKnown RBP7.93□□□□□ -1.14
USP35-204ENST00000530267 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms