RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
CAPN1-217ENST00000529133 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
CAPN1-217ENST00000529133 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
CAPN1-217ENST00000529133 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
CAPN1-217ENST00000529133 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
CAPN1-217ENST00000529133 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
CAPN1-217ENST00000529133 NREPQ16612 68 aa6.34□□□□□ -1.39
CAPN1-217ENST00000529133 J3KT08 172 aa6.32□□□□□ -1.4
CAPN1-217ENST00000529133 Q6ZVQ6 151 aa6.32□□□□□ -1.4
CAPN1-217ENST00000529133 C9orf92A6NGG3 77 aa6.3□□□□□ -1.4
CAPN1-217ENST00000529133 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
CAPN1-217ENST00000529133 UQCRQO14949 82 aa6.28□□□□□ -1.4
CAPN1-217ENST00000529133 IGKV3D-7A0A0C4DH55 119 aa6.27□□□□□ -1.41
CAPN1-217ENST00000529133 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
CAPN1-217ENST00000529133 A8MWP4 228 aa6.26□□□□□ -1.41
CAPN1-217ENST00000529133 BPY2O14599 106 aa6.26□□□□□ -1.41
CAPN1-217ENST00000529133 DSCR10P59022 87 aa6.26□□□□□ -1.41
CAPN1-217ENST00000529133 LPAP08519 4548 aa6.26□□□□□ -1.41
CAPN1-217ENST00000529133 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
CAPN1-217ENST00000529133 NDUFB1O75438 58 aa6.25□□□□□ -1.41
CAPN1-217ENST00000529133 COX7CP15954 63 aa6.25□□□□□ -1.41
CAPN1-217ENST00000529133 XP32Q5T750 250 aa6.25□□□□□ -1.41
CAPN1-217ENST00000529133 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
CAPN1-217ENST00000529133 SERP2Q8N6R1 65 aa6.24□□□□□ -1.41
CAPN1-217ENST00000529133 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
CAPN1-217ENST00000529133 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
CAPN1-217ENST00000529133 K7EQZ3 153 aa6.22□□□□□ -1.41
CAPN1-217ENST00000529133 LINC00313P59037 77 aa6.21□□□□□ -1.42
CAPN1-217ENST00000529133 KRTAP16-1A8MUX0 517 aa6.2□□□□□ -1.42
CAPN1-217ENST00000529133 Q8N9L7 120 aa6.2□□□□□ -1.42
CAPN1-217ENST00000529133 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
CAPN1-217ENST00000529133 A0A087WVE0 104 aa6.19□□□□□ -1.42
CAPN1-217ENST00000529133 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
CAPN1-217ENST00000529133 LRP2P98164 4655 aa6.17□□□□□ -1.42
CAPN1-217ENST00000529133 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
CAPN1-217ENST00000529133 MMP24-AS1A0A0U1RRL7 71 aa6.17□□□□□ -1.42
CAPN1-217ENST00000529133 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
CAPN1-217ENST00000529133 Q75L30 129 aa6.16□□□□□ -1.42
CAPN1-217ENST00000529133 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
CAPN1-217ENST00000529133 A8MUU9 505 aa6.15□□□□□ -1.42
CAPN1-217ENST00000529133 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
CAPN1-217ENST00000529133 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
CAPN1-217ENST00000529133 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
CAPN1-217ENST00000529133 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
CAPN1-217ENST00000529133 UBR4Q5T4S7 5183 aa6.11□□□□□ -1.43
CAPN1-217ENST00000529133 TMEM258P61165 79 aa6.11□□□□□ -1.43
CAPN1-217ENST00000529133 PCOTHQ58A44 107 aa6.11□□□□□ -1.43
CAPN1-217ENST00000529133 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
CAPN1-217ENST00000529133 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
CAPN1-217ENST00000529133 NDUFC1O43677 76 aa6.1□□□□□ -1.43
CAPN1-217ENST00000529133 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
CAPN1-217ENST00000529133 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
CAPN1-217ENST00000529133 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
CAPN1-217ENST00000529133 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
CAPN1-217ENST00000529133 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
CAPN1-217ENST00000529133 OCR1Q9BZK8 76 aa6.06□□□□□ -1.44
CAPN1-217ENST00000529133 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
CAPN1-217ENST00000529133 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
CAPN1-217ENST00000529133 NDUFS5O43920 106 aa6.04□□□□□ -1.44
CAPN1-217ENST00000529133 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
CAPN1-217ENST00000529133 C20orf197Q8N268 126 aa6.02□□□□□ -1.45
CAPN1-217ENST00000529133 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
CAPN1-217ENST00000529133 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
CAPN1-217ENST00000529133 H3BPC8 53 aa5.99□□□□□ -1.45
CAPN1-217ENST00000529133 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
CAPN1-217ENST00000529133 H7BZZ5 65 aa5.97□□□□□ -1.45
CAPN1-217ENST00000529133 Q5W150 140 aa5.97□□□□□ -1.45
CAPN1-217ENST00000529133 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
CAPN1-217ENST00000529133 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
CAPN1-217ENST00000529133 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
CAPN1-217ENST00000529133 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
CAPN1-217ENST00000529133 MP68P56378 58 aa5.93□□□□□ -1.46
CAPN1-217ENST00000529133 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
CAPN1-217ENST00000529133 SPINK7P58062 85 aa5.91□□□□□ -1.46
CAPN1-217ENST00000529133 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
CAPN1-217ENST00000529133 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
CAPN1-217ENST00000529133 MUC2Q02817 5179 aa5.88□□□□□ -1.47
CAPN1-217ENST00000529133 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
CAPN1-217ENST00000529133 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
CAPN1-217ENST00000529133 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
CAPN1-217ENST00000529133 HRES1P13985 223 aa5.87□□□□□ -1.47
CAPN1-217ENST00000529133 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
CAPN1-217ENST00000529133 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
CAPN1-217ENST00000529133 H0Y9P7 68 aa5.84□□□□□ -1.47
CAPN1-217ENST00000529133 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
CAPN1-217ENST00000529133 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
CAPN1-217ENST00000529133 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
CAPN1-217ENST00000529133 CYP4F30PQ9H0H9 118 aa5.81□□□□□ -1.48
CAPN1-217ENST00000529133 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
CAPN1-217ENST00000529133 COX6B2Q6YFQ2 88 aa5.79□□□□□ -1.48
CAPN1-217ENST00000529133 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
CAPN1-217ENST00000529133 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
CAPN1-217ENST00000529133 C1orf64Q8NEQ6 169 aa5.78□□□□□ -1.48
CAPN1-217ENST00000529133 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
CAPN1-217ENST00000529133 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
CAPN1-217ENST00000529133 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
CAPN1-217ENST00000529133 MT1HP80294 61 aa5.72□□□□□ -1.49
CAPN1-217ENST00000529133 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
CAPN1-217ENST00000529133 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
CAPN1-217ENST00000529133 V9GYY9 64 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms