RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CDIP1Q9H305 208 aa4.46□□□□□ -1.7
SSBP3-211ENST00000528787 A8MWP4 228 aa4.44□□□□□ -1.7
SSBP3-211ENST00000528787 CXCL6P80162 114 aa4.44□□□□□ -1.7
SSBP3-211ENST00000528787 Q6ZVQ6 151 aa4.44□□□□□ -1.7
SSBP3-211ENST00000528787 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
SSBP3-211ENST00000528787 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
SSBP3-211ENST00000528787 LINC00313P59037 77 aa4.43□□□□□ -1.7
SSBP3-211ENST00000528787 Q96NJ1 140 aa4.43□□□□□ -1.7
SSBP3-211ENST00000528787 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
SSBP3-211ENST00000528787 SMIM20Q8N5G0 67 aa4.42□□□□□ -1.7
SSBP3-211ENST00000528787 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
SSBP3-211ENST00000528787 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.71
SSBP3-211ENST00000528787 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
SSBP3-211ENST00000528787 LINC00643Q86TS7 51 aa4.4□□□□□ -1.71
SSBP3-211ENST00000528787 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
SSBP3-211ENST00000528787 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
SSBP3-211ENST00000528787 XP32Q5T750 250 aa4.37□□□□□ -1.71
SSBP3-211ENST00000528787 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
SSBP3-211ENST00000528787 Q75L30 129 aa4.37□□□□□ -1.71
SSBP3-211ENST00000528787 IGKV3D-7A0A0C4DH55 119 aa4.36□□□□□ -1.71
SSBP3-211ENST00000528787 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SSBP3-211ENST00000528787 SEC61GP60059 68 aa4.36□□□□□ -1.71
SSBP3-211ENST00000528787 hDV103S1A0JD37 113 aa4.35□□□□□ -1.71
SSBP3-211ENST00000528787 DSCR10P59022 87 aa4.35□□□□□ -1.71
SSBP3-211ENST00000528787 TMEM254Q8TBM7 123 aa4.35□□□□□ -1.71
SSBP3-211ENST00000528787 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
SSBP3-211ENST00000528787 K7EQZ3 153 aa4.34□□□□□ -1.71
SSBP3-211ENST00000528787 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
SSBP3-211ENST00000528787 HERC1Q15751 4861 aa4.33□□□□□ -1.72
SSBP3-211ENST00000528787 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
SSBP3-211ENST00000528787 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
SSBP3-211ENST00000528787 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
SSBP3-211ENST00000528787 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
SSBP3-211ENST00000528787 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
SSBP3-211ENST00000528787 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
SSBP3-211ENST00000528787 A8MUU9 505 aa4.31□□□□□ -1.72
SSBP3-211ENST00000528787 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
SSBP3-211ENST00000528787 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
SSBP3-211ENST00000528787 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
SSBP3-211ENST00000528787 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
SSBP3-211ENST00000528787 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
SSBP3-211ENST00000528787 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
SSBP3-211ENST00000528787 LCE2BO14633 110 aa4.3□□□□□ -1.72
SSBP3-211ENST00000528787 NDUFS5O43920 106 aa4.3□□□□□ -1.72
SSBP3-211ENST00000528787 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
SSBP3-211ENST00000528787 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
SSBP3-211ENST00000528787 Q8N9L7 120 aa4.27□□□□□ -1.73
SSBP3-211ENST00000528787 ZCCHC13Q8WW36 166 aaKnown RBP4.26□□□□□ -1.73
SSBP3-211ENST00000528787 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
SSBP3-211ENST00000528787 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
SSBP3-211ENST00000528787 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SSBP3-211ENST00000528787 V9GYY9 64 aa4.25□□□□□ -1.73
SSBP3-211ENST00000528787 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
SSBP3-211ENST00000528787 ATOX1O00244 68 aa4.23□□□□□ -1.73
SSBP3-211ENST00000528787 UQCRQO14949 82 aa4.22□□□□□ -1.73
SSBP3-211ENST00000528787 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
SSBP3-211ENST00000528787 MT-ATP8P03928 68 aa4.2□□□□□ -1.74
SSBP3-211ENST00000528787 MP68P56378 58 aa4.2□□□□□ -1.74
SSBP3-211ENST00000528787 LRP2P98164 4655 aa4.19□□□□□ -1.74
SSBP3-211ENST00000528787 TRAV22A0A0B4J277 110 aa4.19□□□□□ -1.74
SSBP3-211ENST00000528787 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
SSBP3-211ENST00000528787 RBM12B-AS1Q9P1G2 102 aa4.19□□□□□ -1.74
SSBP3-211ENST00000528787 A0A087WVE0 104 aa4.18□□□□□ -1.74
SSBP3-211ENST00000528787 H3BPC8 53 aa4.18□□□□□ -1.74
SSBP3-211ENST00000528787 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
SSBP3-211ENST00000528787 SPINK7P58062 85 aa4.16□□□□□ -1.74
SSBP3-211ENST00000528787 LPAP08519 4548 aa4.16□□□□□ -1.74
SSBP3-211ENST00000528787 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
SSBP3-211ENST00000528787 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
SSBP3-211ENST00000528787 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
SSBP3-211ENST00000528787 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 TRAV7A0A075B6U4 112 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 H0Y9P7 68 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 Q5W150 140 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
SSBP3-211ENST00000528787 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
SSBP3-211ENST00000528787 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
SSBP3-211ENST00000528787 TMEM258P61165 79 aa4.1□□□□□ -1.75
SSBP3-211ENST00000528787 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
SSBP3-211ENST00000528787 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
SSBP3-211ENST00000528787 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
SSBP3-211ENST00000528787 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
SSBP3-211ENST00000528787 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
SSBP3-211ENST00000528787 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
SSBP3-211ENST00000528787 HRES1P13985 223 aa4.06□□□□□ -1.76
SSBP3-211ENST00000528787 A8MUN3 132 aa4.05□□□□□ -1.76
SSBP3-211ENST00000528787 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SSBP3-211ENST00000528787 COX7CP15954 63 aa4.04□□□□□ -1.76
SSBP3-211ENST00000528787 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
SSBP3-211ENST00000528787 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
SSBP3-211ENST00000528787 NDUFC1O43677 76 aa4.03□□□□□ -1.76
SSBP3-211ENST00000528787 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
SSBP3-211ENST00000528787 MUC2Q02817 5179 aa4□□□□□ -1.77
SSBP3-211ENST00000528787 PMAIP1Q13794 54 aa4□□□□□ -1.77
SSBP3-211ENST00000528787 LCE2CQ5TA81 110 aa4□□□□□ -1.77
SSBP3-211ENST00000528787 M0R2T5 61 aa3.99□□□□□ -1.77
SSBP3-211ENST00000528787 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
SSBP3-211ENST00000528787 C20orf197Q8N268 126 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms