RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
PABPC4-220ENST00000525669 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
PABPC4-220ENST00000525669 A0A1B0GVX0 72 aa4.95□□□□□ -1.62
PABPC4-220ENST00000525669 NDUFB1O75438 58 aa4.95□□□□□ -1.62
PABPC4-220ENST00000525669 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
PABPC4-220ENST00000525669 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
PABPC4-220ENST00000525669 HCG22E2RYF7 251 aa4.94□□□□□ -1.62
PABPC4-220ENST00000525669 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
PABPC4-220ENST00000525669 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
PABPC4-220ENST00000525669 H3BS24 57 aa4.93□□□□□ -1.62
PABPC4-220ENST00000525669 ANAPC13Q9BS18 74 aa4.93□□□□□ -1.62
PABPC4-220ENST00000525669 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
PABPC4-220ENST00000525669 PCP4P48539 62 aa4.92□□□□□ -1.62
PABPC4-220ENST00000525669 CASC2Q6XLA1 102 aa4.92□□□□□ -1.62
PABPC4-220ENST00000525669 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
PABPC4-220ENST00000525669 ATOX1O00244 68 aa4.9□□□□□ -1.63
PABPC4-220ENST00000525669 OXTP01178 125 aa4.9□□□□□ -1.63
PABPC4-220ENST00000525669 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
PABPC4-220ENST00000525669 XP32Q5T750 250 aa4.89□□□□□ -1.63
PABPC4-220ENST00000525669 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
PABPC4-220ENST00000525669 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PABPC4-220ENST00000525669 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
PABPC4-220ENST00000525669 LINC00313P59037 77 aa4.87□□□□□ -1.63
PABPC4-220ENST00000525669 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
PABPC4-220ENST00000525669 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
PABPC4-220ENST00000525669 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
PABPC4-220ENST00000525669 NDUFS5O43920 106 aa4.86□□□□□ -1.63
PABPC4-220ENST00000525669 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
PABPC4-220ENST00000525669 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
PABPC4-220ENST00000525669 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
PABPC4-220ENST00000525669 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
PABPC4-220ENST00000525669 TMEM254Q8TBM7 123 aa4.85□□□□□ -1.63
PABPC4-220ENST00000525669 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
PABPC4-220ENST00000525669 TRAV7A0A075B6U4 112 aa4.84□□□□□ -1.63
PABPC4-220ENST00000525669 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
PABPC4-220ENST00000525669 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
PABPC4-220ENST00000525669 COX7CP15954 63 aa4.83□□□□□ -1.64
PABPC4-220ENST00000525669 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
PABPC4-220ENST00000525669 TNXBP22105 4242 aa4.82□□□□□ -1.64
PABPC4-220ENST00000525669 HERC2O95714 4834 aa4.81□□□□□ -1.64
PABPC4-220ENST00000525669 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
PABPC4-220ENST00000525669 PRR4Q16378 134 aa4.8□□□□□ -1.64
PABPC4-220ENST00000525669 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
PABPC4-220ENST00000525669 UQCRQO14949 82 aa4.79□□□□□ -1.64
PABPC4-220ENST00000525669 C20orf197Q8N268 126 aa4.79□□□□□ -1.64
PABPC4-220ENST00000525669 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
PABPC4-220ENST00000525669 H0Y9P7 68 aa4.78□□□□□ -1.64
PABPC4-220ENST00000525669 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
PABPC4-220ENST00000525669 CYSTM1Q9H1C7 97 aa4.78□□□□□ -1.64
PABPC4-220ENST00000525669 Q5W150 140 aa4.77□□□□□ -1.65
PABPC4-220ENST00000525669 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
PABPC4-220ENST00000525669 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
PABPC4-220ENST00000525669 TRAV22A0A0B4J277 110 aa4.75□□□□□ -1.65
PABPC4-220ENST00000525669 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
PABPC4-220ENST00000525669 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
PABPC4-220ENST00000525669 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
PABPC4-220ENST00000525669 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
PABPC4-220ENST00000525669 A0A0U1RQV1 116 aa4.74□□□□□ -1.65
PABPC4-220ENST00000525669 A8MUU9 505 aa4.73□□□□□ -1.65
PABPC4-220ENST00000525669 MP68P56378 58 aa4.73□□□□□ -1.65
PABPC4-220ENST00000525669 C1orf64Q8NEQ6 169 aa4.72□□□□□ -1.65
PABPC4-220ENST00000525669 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
PABPC4-220ENST00000525669 KLKP1Q107X0 134 aa4.7□□□□□ -1.66
PABPC4-220ENST00000525669 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
PABPC4-220ENST00000525669 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
PABPC4-220ENST00000525669 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
PABPC4-220ENST00000525669 Q75L30 129 aa4.68□□□□□ -1.66
PABPC4-220ENST00000525669 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
PABPC4-220ENST00000525669 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
PABPC4-220ENST00000525669 H3BPC8 53 aa4.67□□□□□ -1.66
PABPC4-220ENST00000525669 H7BZZ5 65 aa4.67□□□□□ -1.66
PABPC4-220ENST00000525669 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
PABPC4-220ENST00000525669 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
PABPC4-220ENST00000525669 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
PABPC4-220ENST00000525669 LOC101927531A0A1B0GV80 90 aa4.65□□□□□ -1.67
PABPC4-220ENST00000525669 CYP4F30PQ9H0H9 118 aa4.65□□□□□ -1.67
PABPC4-220ENST00000525669 ATP11AUNQ6ZP68 121 aa4.64□□□□□ -1.67
PABPC4-220ENST00000525669 NDUFC1O43677 76 aa4.62□□□□□ -1.67
PABPC4-220ENST00000525669 TMEM258P61165 79 aa4.6□□□□□ -1.67
PABPC4-220ENST00000525669 FAM236DA0A1B0GTK5 79 aa4.59□□□□□ -1.67
PABPC4-220ENST00000525669 FAM236CP0DP71 79 aa4.59□□□□□ -1.67
PABPC4-220ENST00000525669 HRES1P13985 223 aa4.59□□□□□ -1.67
PABPC4-220ENST00000525669 SPINK7P58062 85 aa4.59□□□□□ -1.67
PABPC4-220ENST00000525669 C7orf65Q6ZTY9 151 aa4.59□□□□□ -1.67
PABPC4-220ENST00000525669 LPAP08519 4548 aa4.59□□□□□ -1.68
PABPC4-220ENST00000525669 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
PABPC4-220ENST00000525669 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
PABPC4-220ENST00000525669 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
PABPC4-220ENST00000525669 SEC61BP60468 96 aaKnown RBP4.53□□□□□ -1.68
PABPC4-220ENST00000525669 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
PABPC4-220ENST00000525669 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
PABPC4-220ENST00000525669 LRP2P98164 4655 aa4.48□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
PABPC4-220ENST00000525669 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
PABPC4-220ENST00000525669 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
PABPC4-220ENST00000525669 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms