RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 A0A087WSZ3 146 aa3.6□□□□□ -1.83
CD44-214ENST00000525211 RPS29P62273 56 aaKnown RBP3.6□□□□□ -1.83
CD44-214ENST00000525211 RBM3P98179 157 aaKnown RBP3.6□□□□□ -1.83
CD44-214ENST00000525211 Q6Q795 121 aa3.6□□□□□ -1.83
CD44-214ENST00000525211 IGLV7-46A0A075B6I9 117 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 H3BQ85 93 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 CCKP06307 115 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 Q5XG85 94 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 TEN1Q86WV5 123 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 VPS25Q9BRG1 176 aa3.59□□□□□ -1.83
CD44-214ENST00000525211 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
CD44-214ENST00000525211 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
CD44-214ENST00000525211 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
CD44-214ENST00000525211 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
CD44-214ENST00000525211 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
CD44-214ENST00000525211 ASB16-AS1Q495Z4 193 aa3.57□□□□□ -1.84
CD44-214ENST00000525211 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
CD44-214ENST00000525211 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
CD44-214ENST00000525211 JMJD7-PLA2G4BH0Y9G9 81 aa3.56□□□□□ -1.84
CD44-214ENST00000525211 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
CD44-214ENST00000525211 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
CD44-214ENST00000525211 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
CD44-214ENST00000525211 C9orf92A6NGG3 77 aa3.55□□□□□ -1.84
CD44-214ENST00000525211 FP248Q71RG6 208 aaPredicted RBP3.55□□□□□ -1.84
CD44-214ENST00000525211 MUC2Q02817 5179 aa3.55□□□□□ -1.84
CD44-214ENST00000525211 F8W1H4 67 aa3.54□□□□□ -1.84
CD44-214ENST00000525211 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CD44-214ENST00000525211 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
CD44-214ENST00000525211 IGKV4-1P06312 121 aa3.52□□□□□ -1.85
CD44-214ENST00000525211 SEC61BP60468 96 aaKnown RBP3.52□□□□□ -1.85
CD44-214ENST00000525211 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
CD44-214ENST00000525211 LINC00846Q9NV44 126 aa3.52□□□□□ -1.85
CD44-214ENST00000525211 DSCR10P59022 87 aa3.51□□□□□ -1.85
CD44-214ENST00000525211 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
CD44-214ENST00000525211 PDE6GP18545 87 aa3.5□□□□□ -1.85
CD44-214ENST00000525211 Q6ZVQ6 151 aa3.5□□□□□ -1.85
CD44-214ENST00000525211 SIGMAR1Q99720 223 aa3.5□□□□□ -1.85
CD44-214ENST00000525211 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
CD44-214ENST00000525211 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
CD44-214ENST00000525211 SS18L2Q9UHA2 77 aa3.49□□□□□ -1.85
CD44-214ENST00000525211 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
CD44-214ENST00000525211 NREPQ16612 68 aa3.48□□□□□ -1.85
CD44-214ENST00000525211 Q8N9L7 120 aa3.48□□□□□ -1.85
CD44-214ENST00000525211 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
CD44-214ENST00000525211 IGHV6-1A0A0B4J1U7 121 aa3.47□□□□□ -1.85
CD44-214ENST00000525211 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
CD44-214ENST00000525211 K7EQZ3 153 aa3.46□□□□□ -1.86
CD44-214ENST00000525211 BPY2O14599 106 aa3.46□□□□□ -1.86
CD44-214ENST00000525211 Q75L30 129 aa3.46□□□□□ -1.86
CD44-214ENST00000525211 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
CD44-214ENST00000525211 A0A1B0GW54 56 aa3.45□□□□□ -1.86
CD44-214ENST00000525211 PCOTHQ58A44 107 aa3.45□□□□□ -1.86
CD44-214ENST00000525211 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
CD44-214ENST00000525211 A8MWP4 228 aa3.44□□□□□ -1.86
CD44-214ENST00000525211 LINC00313P59037 77 aa3.44□□□□□ -1.86
CD44-214ENST00000525211 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
CD44-214ENST00000525211 PRR15Q8IV56 129 aa3.44□□□□□ -1.86
CD44-214ENST00000525211 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
CD44-214ENST00000525211 A8MUU9 505 aa3.43□□□□□ -1.86
CD44-214ENST00000525211 J3KT08 172 aa3.43□□□□□ -1.86
CD44-214ENST00000525211 C20orf166-AS1Q96NR2 134 aa3.43□□□□□ -1.86
CD44-214ENST00000525211 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
CD44-214ENST00000525211 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
CD44-214ENST00000525211 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
CD44-214ENST00000525211 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
CD44-214ENST00000525211 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
CD44-214ENST00000525211 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
CD44-214ENST00000525211 NDUFB1O75438 58 aa3.38□□□□□ -1.87
CD44-214ENST00000525211 ACYP1P07311 99 aa3.38□□□□□ -1.87
CD44-214ENST00000525211 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
CD44-214ENST00000525211 A0A087WVE0 104 aa3.37□□□□□ -1.87
CD44-214ENST00000525211 hDV103S1A0JD37 113 aa3.37□□□□□ -1.87
CD44-214ENST00000525211 Q5W150 140 aa3.37□□□□□ -1.87
CD44-214ENST00000525211 MRPL34Q9BQ48 92 aaKnown RBP3.37□□□□□ -1.87
CD44-214ENST00000525211 CXCL6P80162 114 aa3.36□□□□□ -1.87
CD44-214ENST00000525211 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
CD44-214ENST00000525211 HCG22E2RYF7 251 aa3.35□□□□□ -1.87
CD44-214ENST00000525211 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
CD44-214ENST00000525211 LINC00643Q86TS7 51 aa3.35□□□□□ -1.87
CD44-214ENST00000525211 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
CD44-214ENST00000525211 ATP11AUNQ6ZP68 121 aa3.34□□□□□ -1.87
CD44-214ENST00000525211 ZCCHC13Q8WW36 166 aaKnown RBP3.34□□□□□ -1.87
CD44-214ENST00000525211 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
CD44-214ENST00000525211 HRES1P13985 223 aa3.32□□□□□ -1.88
CD44-214ENST00000525211 HIST1H4AP62805 103 aaKnown RBP3.32□□□□□ -1.88
CD44-214ENST00000525211 J3QR89 54 aa3.31□□□□□ -1.88
CD44-214ENST00000525211 NDUFS5O43920 106 aa3.31□□□□□ -1.88
CD44-214ENST00000525211 ATP5EP2Q5VTU8 51 aa3.31□□□□□ -1.88
CD44-214ENST00000525211 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CD44-214ENST00000525211 K7ERU9 68 aa3.3□□□□□ -1.88
CD44-214ENST00000525211 SPINK7P58062 85 aa3.29□□□□□ -1.88
CD44-214ENST00000525211 MT1HP80294 61 aa3.27□□□□□ -1.89
CD44-214ENST00000525211 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
CD44-214ENST00000525211 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
CD44-214ENST00000525211 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
CD44-214ENST00000525211 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
CD44-214ENST00000525211 H0Y9P7 68 aa3.21□□□□□ -1.9
CD44-214ENST00000525211 UQCRQO14949 82 aa3.21□□□□□ -1.9
CD44-214ENST00000525211 C4orf26Q17RF5 130 aa3.21□□□□□ -1.9
CD44-214ENST00000525211 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms