RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 TENM4Q6N022 2769 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 NF1P21359 2839 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 A0A087WSZ3 146 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 A0A096LNI7 61 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 A8MWP4 228 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 MP68P56378 58 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 C9orf163Q8N9P6 203 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 TRRAPQ9Y4A5 3859 aa2.36□□□□□ -2.03
SGCE-211ENST00000522045 SETD2Q9BYW2 2564 aaPredicted RBP2.35□□□□□ -2.03
SGCE-211ENST00000522045 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 PRLHP81277 87 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 C1orf195Q5TG92 126 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 LINC00472Q9H8W2 130 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 HIVEP1P15822 2718 aa2.35□□□□□ -2.03
SGCE-211ENST00000522045 NSD1Q96L73 2696 aaPredicted RBP2.34□□□□□ -2.03
SGCE-211ENST00000522045 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 H0Y9P7 68 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 UBE2AP49459 152 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 CASC2Q6XLA1 102 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 WFDC13Q8IUB5 93 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 B9D2Q9BPU9 175 aa2.34□□□□□ -2.03
SGCE-211ENST00000522045 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.04
SGCE-211ENST00000522045 VWFP04275 2813 aa2.34□□□□□ -2.04
SGCE-211ENST00000522045 RPL37AP61513 92 aaKnown RBP2.33□□□□□ -2.04
SGCE-211ENST00000522045 Q5VV11 94 aa2.33□□□□□ -2.04
SGCE-211ENST00000522045 LINC00208Q96KT6 92 aa2.33□□□□□ -2.04
SGCE-211ENST00000522045 FASNP49327 2511 aaKnown RBP2.33□□□□□ -2.04
SGCE-211ENST00000522045 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 K7EIL1 84 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 PHF5AQ7RTV0 110 aaKnown RBP2.32□□□□□ -2.04
SGCE-211ENST00000522045 Q96NJ1 140 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 FBN1P35555 2871 aaKnown RBP2.32□□□□□ -2.04
SGCE-211ENST00000522045 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
SGCE-211ENST00000522045 OTOGQ6ZRI0 2925 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 IGKV2-24A0A0C4DH68 120 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 TP53AIP1Q9HCN2 124 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
SGCE-211ENST00000522045 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 A8MUN3 132 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 DEFB116Q30KQ4 102 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
SGCE-211ENST00000522045 COA5Q86WW8 74 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 SPACA4Q8TDM5 124 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 APLNQ9ULZ1 77 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 ITPR2Q14571 2701 aa2.3□□□□□ -2.04
SGCE-211ENST00000522045 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 TENM3Q9P273 2699 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 HELZ2Q9BYK8 2649 aaKnown RBP2.29□□□□□ -2.04
SGCE-211ENST00000522045 HECTD1Q9ULT8 2610 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 PSPHP1O15172 72 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 ZNF706Q9Y5V0 76 aaPredicted RBP2.29□□□□□ -2.04
SGCE-211ENST00000522045 TENM1Q9UKZ4 2725 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 VPS13DQ5THJ4 4388 aa2.29□□□□□ -2.04
SGCE-211ENST00000522045 PLECQ15149 4684 aaKnown RBP2.29□□□□□ -2.04
SGCE-211ENST00000522045 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
SGCE-211ENST00000522045 CD164Q04900 197 aa2.28□□□□□ -2.04
SGCE-211ENST00000522045 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
SGCE-211ENST00000522045 UBE2DNLQ8IWF7 75 aa2.28□□□□□ -2.04
SGCE-211ENST00000522045 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
SGCE-211ENST00000522045 LYSTQ99698 3801 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 TEP1Q99973 2627 aaKnown RBP2.27□□□□□ -2.05
SGCE-211ENST00000522045 DNAH7Q8WXX0 4024 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
SGCE-211ENST00000522045 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 CDC42SE1Q9NRR8 79 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 ATRQ13535 2644 aa2.27□□□□□ -2.05
SGCE-211ENST00000522045 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
SGCE-211ENST00000522045 CHKB-CPT1BH3BT56 60 aa2.26□□□□□ -2.05
SGCE-211ENST00000522045 Q5W150 140 aa2.26□□□□□ -2.05
SGCE-211ENST00000522045 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
SGCE-211ENST00000522045 NUPR2A6NF83 97 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 A6NN06 94 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 C8orf87E5RJ46 101 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 SEC61GP60059 68 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 ATP11AUNQ6ZP68 121 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 LCA10Q71F78 164 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
SGCE-211ENST00000522045 A0A087WTM6 91 aa2.24□□□□□ -2.05
SGCE-211ENST00000522045 HRES1P13985 223 aa2.24□□□□□ -2.05
SGCE-211ENST00000522045 PCOTHQ58A44 107 aa2.24□□□□□ -2.05
SGCE-211ENST00000522045 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
SGCE-211ENST00000522045 DNAH2Q9P225 4427 aa2.24□□□□□ -2.05
SGCE-211ENST00000522045 IGHV6-1A0A0B4J1U7 121 aa2.23□□□□□ -2.05
SGCE-211ENST00000522045 A6NED7 52 aa2.23□□□□□ -2.05
SGCE-211ENST00000522045 NDUFS5O43920 106 aa2.23□□□□□ -2.05
SGCE-211ENST00000522045 PSORS1C2Q9UIG4 136 aa2.23□□□□□ -2.05
SGCE-211ENST00000522045 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms