RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
TRAM1-205ENST00000521425 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
TRAM1-205ENST00000521425 LINC00313P59037 77 aa10.61□□□□□ -0.71
TRAM1-205ENST00000521425 KRTAP10-2P60368 255 aa10.6□□□□□ -0.71
TRAM1-205ENST00000521425 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
TRAM1-205ENST00000521425 A0A087X002 238 aa10.51□□□□□ -0.73
TRAM1-205ENST00000521425 NOTCH2NLQ7Z3S9 236 aa10.51□□□□□ -0.73
TRAM1-205ENST00000521425 SPANXA2-OT1Q8N9U9 137 aa10.51□□□□□ -0.73
TRAM1-205ENST00000521425 SMR3BP02814 79 aaPredicted RBP10.49□□□□□ -0.73
TRAM1-205ENST00000521425 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
TRAM1-205ENST00000521425 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
TRAM1-205ENST00000521425 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
TRAM1-205ENST00000521425 A8MWP4 228 aa10.47□□□□□ -0.73
TRAM1-205ENST00000521425 ZNF861PO60384 105 aa10.46□□□□□ -0.73
TRAM1-205ENST00000521425 PRR26Q8N8Z3 221 aa10.46□□□□□ -0.74
TRAM1-205ENST00000521425 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
TRAM1-205ENST00000521425 FLG2Q5D862 2391 aaPredicted RBP10.44□□□□□ -0.74
TRAM1-205ENST00000521425 LINC00472Q9H8W2 130 aa10.44□□□□□ -0.74
TRAM1-205ENST00000521425 DNAH2Q9P225 4427 aa10.44□□□□□ -0.74
TRAM1-205ENST00000521425 A0A1B0GW54 56 aa10.42□□□□□ -0.74
TRAM1-205ENST00000521425 LINC01558Q9Y6Z2 57 aa10.41□□□□□ -0.74
TRAM1-205ENST00000521425 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
TRAM1-205ENST00000521425 Q6ZR54 194 aa10.4□□□□□ -0.74
TRAM1-205ENST00000521425 DMBT1Q9UGM3 2413 aaPredicted RBP10.4□□□□□ -0.74
TRAM1-205ENST00000521425 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
TRAM1-205ENST00000521425 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
TRAM1-205ENST00000521425 IGLV7-43P04211 117 aa10.38□□□□□ -0.75
TRAM1-205ENST00000521425 KRTAP10-1P60331 282 aa10.37□□□□□ -0.75
TRAM1-205ENST00000521425 KRTAP13-1Q8IUC0 172 aa10.37□□□□□ -0.75
TRAM1-205ENST00000521425 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
TRAM1-205ENST00000521425 H3BPC8 53 aa10.35□□□□□ -0.75
TRAM1-205ENST00000521425 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
TRAM1-205ENST00000521425 HRES1P13985 223 aa10.35□□□□□ -0.75
TRAM1-205ENST00000521425 DNAH17Q9UFH2 4485 aa10.35□□□□□ -0.75
TRAM1-205ENST00000521425 ZNF706Q9Y5V0 76 aaPredicted RBP10.35□□□□□ -0.75
TRAM1-205ENST00000521425 HYDINQ4G0P3 5121 aa10.34□□□□□ -0.75
TRAM1-205ENST00000521425 DNAH8Q96JB1 4490 aa10.34□□□□□ -0.75
TRAM1-205ENST00000521425 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
TRAM1-205ENST00000521425 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
TRAM1-205ENST00000521425 SPRR1BP22528 89 aa10.32□□□□□ -0.76
TRAM1-205ENST00000521425 PLAC8Q9NZF1 115 aa10.32□□□□□ -0.76
TRAM1-205ENST00000521425 A0A1B0GVX0 72 aa10.27□□□□□ -0.77
TRAM1-205ENST00000521425 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
TRAM1-205ENST00000521425 Q96NJ1 140 aa10.27□□□□□ -0.77
TRAM1-205ENST00000521425 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
TRAM1-205ENST00000521425 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
TRAM1-205ENST00000521425 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
TRAM1-205ENST00000521425 IGKV2D-30A0A075B6S6 120 aa10.2□□□□□ -0.78
TRAM1-205ENST00000521425 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
TRAM1-205ENST00000521425 Q5W150 140 aa10.2□□□□□ -0.78
TRAM1-205ENST00000521425 SPINK1P00995 79 aa10.18□□□□□ -0.78
TRAM1-205ENST00000521425 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
TRAM1-205ENST00000521425 A0A1B0GU69 56 aa10.17□□□□□ -0.78
TRAM1-205ENST00000521425 KRTAP13-2Q52LG2 175 aa10.14□□□□□ -0.79
TRAM1-205ENST00000521425 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
TRAM1-205ENST00000521425 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
TRAM1-205ENST00000521425 FAT1Q14517 4588 aa10.12□□□□□ -0.79
TRAM1-205ENST00000521425 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
TRAM1-205ENST00000521425 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
TRAM1-205ENST00000521425 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
TRAM1-205ENST00000521425 DYNC2H1Q8NCM8 4307 aaKnown RBP10.08□□□□□ -0.8
TRAM1-205ENST00000521425 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
TRAM1-205ENST00000521425 VPS13BQ7Z7G8 4022 aa10.06□□□□□ -0.8
TRAM1-205ENST00000521425 FAT2Q9NYQ8 4349 aa10.06□□□□□ -0.8
TRAM1-205ENST00000521425 ACYP2P14621 99 aa10.02□□□□□ -0.81
TRAM1-205ENST00000521425 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
TRAM1-205ENST00000521425 UQCR11O14957 56 aa9.98□□□□□ -0.81
TRAM1-205ENST00000521425 Q8N1X5 172 aa9.95□□□□□ -0.82
TRAM1-205ENST00000521425 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
TRAM1-205ENST00000521425 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
TRAM1-205ENST00000521425 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
TRAM1-205ENST00000521425 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
TRAM1-205ENST00000521425 KMT2CQ8NEZ4 4911 aaKnown RBP9.89□□□□□ -0.83
TRAM1-205ENST00000521425 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
TRAM1-205ENST00000521425 Q6ZSA8 131 aa9.84□□□□□ -0.83
TRAM1-205ENST00000521425 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
TRAM1-205ENST00000521425 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
TRAM1-205ENST00000521425 ASB16-AS1Q495Z4 193 aa9.8□□□□□ -0.84
TRAM1-205ENST00000521425 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
TRAM1-205ENST00000521425 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.84
TRAM1-205ENST00000521425 PKD1P98161 4303 aa9.77□□□□□ -0.85
TRAM1-205ENST00000521425 ROMO1P60602 79 aa9.75□□□□□ -0.85
TRAM1-205ENST00000521425 LRP1Q07954 4544 aaKnown RBP9.75□□□□□ -0.85
TRAM1-205ENST00000521425 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
TRAM1-205ENST00000521425 KRTAP25-1Q3LHN0 102 aa9.65□□□□□ -0.86
TRAM1-205ENST00000521425 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
TRAM1-205ENST00000521425 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
TRAM1-205ENST00000521425 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
TRAM1-205ENST00000521425 KRTAP16-1A8MUX0 517 aa9.62□□□□□ -0.87
TRAM1-205ENST00000521425 A8MUU9 505 aa9.57□□□□□ -0.88
TRAM1-205ENST00000521425 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
TRAM1-205ENST00000521425 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
TRAM1-205ENST00000521425 P0C880 135 aa9.52□□□□□ -0.88
TRAM1-205ENST00000521425 Q5VSD8 79 aa9.51□□□□□ -0.89
TRAM1-205ENST00000521425 H0YAA0 97 aa9.44□□□□□ -0.9
TRAM1-205ENST00000521425 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
TRAM1-205ENST00000521425 RYR2Q92736 4967 aa9.43□□□□□ -0.9
TRAM1-205ENST00000521425 RYR3Q15413 4870 aa9.42□□□□□ -0.9
TRAM1-205ENST00000521425 NDUFAF8A1L188 74 aa9.41□□□□□ -0.9
TRAM1-205ENST00000521425 A0A1B0GU33 70 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1317.3 ms