RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 LPAP08519 4548 aa5.88□□□□□ -1.47
TRIM35-204ENST00000521283 ATOX1O00244 68 aa5.87□□□□□ -1.47
TRIM35-204ENST00000521283 COX7BP24311 80 aa5.87□□□□□ -1.47
TRIM35-204ENST00000521283 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
TRIM35-204ENST00000521283 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
TRIM35-204ENST00000521283 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
TRIM35-204ENST00000521283 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
TRIM35-204ENST00000521283 SPRR1BP22528 89 aa5.86□□□□□ -1.47
TRIM35-204ENST00000521283 SMIM20Q8N5G0 67 aa5.86□□□□□ -1.47
TRIM35-204ENST00000521283 IGLV7-46A0A075B6I9 117 aa5.85□□□□□ -1.47
TRIM35-204ENST00000521283 IGLV9-49A0A0B4J1Y8 123 aa5.85□□□□□ -1.47
TRIM35-204ENST00000521283 MOBPQ13875 183 aa5.85□□□□□ -1.47
TRIM35-204ENST00000521283 LAMTOR3Q9UHA4 124 aa5.85□□□□□ -1.47
TRIM35-204ENST00000521283 UQCRQO14949 82 aa5.83□□□□□ -1.48
TRIM35-204ENST00000521283 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
TRIM35-204ENST00000521283 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
TRIM35-204ENST00000521283 A0A0U1RQV1 116 aa5.82□□□□□ -1.48
TRIM35-204ENST00000521283 CXCL6P80162 114 aa5.82□□□□□ -1.48
TRIM35-204ENST00000521283 HIST1H4AP62805 103 aaKnown RBP5.81□□□□□ -1.48
TRIM35-204ENST00000521283 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
TRIM35-204ENST00000521283 Q6ZQT0 140 aa5.8□□□□□ -1.48
TRIM35-204ENST00000521283 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
TRIM35-204ENST00000521283 LIMD2Q9BT23 127 aa5.8□□□□□ -1.48
TRIM35-204ENST00000521283 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
TRIM35-204ENST00000521283 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
TRIM35-204ENST00000521283 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
TRIM35-204ENST00000521283 CD164Q04900 197 aa5.79□□□□□ -1.48
TRIM35-204ENST00000521283 Q6ZQY7 126 aa5.79□□□□□ -1.48
TRIM35-204ENST00000521283 IGLV5-48A0A075B6I7 105 aa5.78□□□□□ -1.48
TRIM35-204ENST00000521283 Q8N377 158 aa5.78□□□□□ -1.48
TRIM35-204ENST00000521283 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
TRIM35-204ENST00000521283 COX7CP15954 63 aa5.76□□□□□ -1.49
TRIM35-204ENST00000521283 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
TRIM35-204ENST00000521283 DEFB105AQ8NG35 78 aa5.75□□□□□ -1.49
TRIM35-204ENST00000521283 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
TRIM35-204ENST00000521283 Q5XG85 94 aa5.74□□□□□ -1.49
TRIM35-204ENST00000521283 F8WEM9 126 aa5.73□□□□□ -1.49
TRIM35-204ENST00000521283 MUC2Q02817 5179 aa5.72□□□□□ -1.49
TRIM35-204ENST00000521283 LINC01547P58512 204 aaPredicted RBP5.72□□□□□ -1.49
TRIM35-204ENST00000521283 SMIM29Q86T20 159 aa5.72□□□□□ -1.49
TRIM35-204ENST00000521283 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
TRIM35-204ENST00000521283 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
TRIM35-204ENST00000521283 NDUFC1O43677 76 aa5.69□□□□□ -1.5
TRIM35-204ENST00000521283 TMEM258P61165 79 aa5.69□□□□□ -1.5
TRIM35-204ENST00000521283 Q6ZVQ6 151 aa5.69□□□□□ -1.5
TRIM35-204ENST00000521283 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
TRIM35-204ENST00000521283 NREPQ16612 68 aa5.68□□□□□ -1.5
TRIM35-204ENST00000521283 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
TRIM35-204ENST00000521283 HRCT1Q6UXD1 115 aa5.68□□□□□ -1.5
TRIM35-204ENST00000521283 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
TRIM35-204ENST00000521283 IGKV3D-7A0A0C4DH55 119 aa5.67□□□□□ -1.5
TRIM35-204ENST00000521283 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
TRIM35-204ENST00000521283 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
TRIM35-204ENST00000521283 ATP5EP56381 51 aaPredicted RBP5.64□□□□□ -1.51
TRIM35-204ENST00000521283 BPY2O14599 106 aa5.63□□□□□ -1.51
TRIM35-204ENST00000521283 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
TRIM35-204ENST00000521283 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
TRIM35-204ENST00000521283 SS18L2Q9UHA2 77 aa5.6□□□□□ -1.51
TRIM35-204ENST00000521283 J3KT08 172 aa5.59□□□□□ -1.51
TRIM35-204ENST00000521283 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
TRIM35-204ENST00000521283 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
TRIM35-204ENST00000521283 A0A087WVE0 104 aa5.57□□□□□ -1.52
TRIM35-204ENST00000521283 A0A0G2JQZ4 141 aa5.55□□□□□ -1.52
TRIM35-204ENST00000521283 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
TRIM35-204ENST00000521283 IGKV4-1P06312 121 aa5.53□□□□□ -1.52
TRIM35-204ENST00000521283 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
TRIM35-204ENST00000521283 H3BPC8 53 aa5.52□□□□□ -1.53
TRIM35-204ENST00000521283 NDUFB1O75438 58 aa5.52□□□□□ -1.53
TRIM35-204ENST00000521283 C5orf47Q569G3 176 aa5.52□□□□□ -1.53
TRIM35-204ENST00000521283 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
TRIM35-204ENST00000521283 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
TRIM35-204ENST00000521283 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
TRIM35-204ENST00000521283 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
TRIM35-204ENST00000521283 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
TRIM35-204ENST00000521283 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
TRIM35-204ENST00000521283 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
TRIM35-204ENST00000521283 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
TRIM35-204ENST00000521283 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
TRIM35-204ENST00000521283 A0A087WSZ3 146 aa5.47□□□□□ -1.53
TRIM35-204ENST00000521283 HCG22E2RYF7 251 aa5.47□□□□□ -1.53
TRIM35-204ENST00000521283 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
TRIM35-204ENST00000521283 H7BZZ5 65 aa5.46□□□□□ -1.54
TRIM35-204ENST00000521283 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
TRIM35-204ENST00000521283 Q75L30 129 aa5.46□□□□□ -1.54
TRIM35-204ENST00000521283 A8MWP4 228 aa5.45□□□□□ -1.54
TRIM35-204ENST00000521283 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
TRIM35-204ENST00000521283 MP68P56378 58 aa5.44□□□□□ -1.54
TRIM35-204ENST00000521283 TP53AIP1Q9HCN2 124 aa5.44□□□□□ -1.54
TRIM35-204ENST00000521283 DSCR10P59022 87 aa5.43□□□□□ -1.54
TRIM35-204ENST00000521283 PRR15Q8IV56 129 aa5.42□□□□□ -1.54
TRIM35-204ENST00000521283 Q96NJ1 140 aa5.42□□□□□ -1.54
TRIM35-204ENST00000521283 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
TRIM35-204ENST00000521283 LINC00472Q9H8W2 130 aa5.41□□□□□ -1.54
TRIM35-204ENST00000521283 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
TRIM35-204ENST00000521283 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
TRIM35-204ENST00000521283 K7EQZ3 153 aa5.39□□□□□ -1.55
TRIM35-204ENST00000521283 LINC00313P59037 77 aa5.39□□□□□ -1.55
TRIM35-204ENST00000521283 A8MUU9 505 aa5.38□□□□□ -1.55
TRIM35-204ENST00000521283 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
TRIM35-204ENST00000521283 CASC2Q6XLA1 102 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms