RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
PTP4A3-203ENST00000520105 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
PTP4A3-203ENST00000520105 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
PTP4A3-203ENST00000520105 J3QL48 77 aa12.23□□□□□ -0.45
PTP4A3-203ENST00000520105 Q96NJ1 140 aa12.22□□□□□ -0.45
PTP4A3-203ENST00000520105 LINC00472Q9H8W2 130 aa12.22□□□□□ -0.45
PTP4A3-203ENST00000520105 ASB16-AS1Q495Z4 193 aa12.21□□□□□ -0.46
PTP4A3-203ENST00000520105 CYSTM1Q9H1C7 97 aa12.2□□□□□ -0.46
PTP4A3-203ENST00000520105 RPS28P62857 69 aaKnown RBP12.19□□□□□ -0.46
PTP4A3-203ENST00000520105 C1orf195Q5TG92 126 aa12.19□□□□□ -0.46
PTP4A3-203ENST00000520105 TRAV7A0A075B6U4 112 aa12.19□□□□□ -0.46
PTP4A3-203ENST00000520105 J3KT08 172 aa12.19□□□□□ -0.46
PTP4A3-203ENST00000520105 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
PTP4A3-203ENST00000520105 BPY2O14599 106 aa12.14□□□□□ -0.47
PTP4A3-203ENST00000520105 IGKV4-1P06312 121 aa12.14□□□□□ -0.47
PTP4A3-203ENST00000520105 DSCR10P59022 87 aa12.09□□□□□ -0.47
PTP4A3-203ENST00000520105 KLKP1Q107X0 134 aa12.08□□□□□ -0.48
PTP4A3-203ENST00000520105 C20orf197Q8N268 126 aa12.08□□□□□ -0.48
PTP4A3-203ENST00000520105 Q8N9L7 120 aa12.06□□□□□ -0.48
PTP4A3-203ENST00000520105 K7EQZ3 153 aa12.02□□□□□ -0.48
PTP4A3-203ENST00000520105 A8MWP4 228 aa12.02□□□□□ -0.49
PTP4A3-203ENST00000520105 H7BZZ5 65 aa11.99□□□□□ -0.49
PTP4A3-203ENST00000520105 FAM236DA0A1B0GTK5 79 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 NDUFC1O43677 76 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 NDUFB1O75438 58 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 FAM236CP0DP71 79 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 PRR15Q8IV56 129 aa11.97□□□□□ -0.49
PTP4A3-203ENST00000520105 HERC1Q15751 4861 aa11.96□□□□□ -0.49
PTP4A3-203ENST00000520105 A0A1B0GVX0 72 aa11.96□□□□□ -0.49
PTP4A3-203ENST00000520105 PRR4Q16378 134 aa11.95□□□□□ -0.5
PTP4A3-203ENST00000520105 FP248Q71RG6 208 aaPredicted RBP11.94□□□□□ -0.5
PTP4A3-203ENST00000520105 NOTCH2NLQ7Z3S9 236 aa11.93□□□□□ -0.5
PTP4A3-203ENST00000520105 IGLV7-46A0A075B6I9 117 aa11.92□□□□□ -0.5
PTP4A3-203ENST00000520105 OCR1Q9BZK8 76 aa11.91□□□□□ -0.5
PTP4A3-203ENST00000520105 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
PTP4A3-203ENST00000520105 TMEM254Q8TBM7 123 aa11.88□□□□□ -0.51
PTP4A3-203ENST00000520105 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
PTP4A3-203ENST00000520105 C9orf92A6NGG3 77 aa11.87□□□□□ -0.51
PTP4A3-203ENST00000520105 SERP1Q9Y6X1 66 aa11.87□□□□□ -0.51
PTP4A3-203ENST00000520105 LINC00313P59037 77 aa11.86□□□□□ -0.51
PTP4A3-203ENST00000520105 C8orf17Q9NRJ1 99 aa11.86□□□□□ -0.51
PTP4A3-203ENST00000520105 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
PTP4A3-203ENST00000520105 C8orf87E5RJ46 101 aa11.82□□□□□ -0.52
PTP4A3-203ENST00000520105 A0A0U1RQV1 116 aa11.81□□□□□ -0.52
PTP4A3-203ENST00000520105 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
PTP4A3-203ENST00000520105 HCG22E2RYF7 251 aa11.8□□□□□ -0.52
PTP4A3-203ENST00000520105 KRTAP13-3Q3SY46 172 aa11.79□□□□□ -0.52
PTP4A3-203ENST00000520105 LPAP08519 4548 aa11.77□□□□□ -0.52
PTP4A3-203ENST00000520105 hDV103S1A0JD37 113 aa11.77□□□□□ -0.53
PTP4A3-203ENST00000520105 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
PTP4A3-203ENST00000520105 KRTAP16-1A8MUX0 517 aa11.75□□□□□ -0.53
PTP4A3-203ENST00000520105 TPRXLQ17RH7 258 aa11.73□□□□□ -0.53
PTP4A3-203ENST00000520105 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.53
PTP4A3-203ENST00000520105 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
PTP4A3-203ENST00000520105 XP32Q5T750 250 aa11.66□□□□□ -0.54
PTP4A3-203ENST00000520105 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
PTP4A3-203ENST00000520105 LRP2P98164 4655 aa11.64□□□□□ -0.55
PTP4A3-203ENST00000520105 Q8N9P0 234 aaPredicted RBP11.63□□□□□ -0.55
PTP4A3-203ENST00000520105 NDUFS5O43920 106 aa11.63□□□□□ -0.55
PTP4A3-203ENST00000520105 ZCCHC13Q8WW36 166 aaKnown RBP11.63□□□□□ -0.55
PTP4A3-203ENST00000520105 C20orf166-AS1Q96NR2 134 aa11.61□□□□□ -0.55
PTP4A3-203ENST00000520105 C4orf26Q17RF5 130 aa11.6□□□□□ -0.55
PTP4A3-203ENST00000520105 A8MUU9 505 aa11.59□□□□□ -0.55
PTP4A3-203ENST00000520105 Q75L30 129 aa11.55□□□□□ -0.56
PTP4A3-203ENST00000520105 RPL37P61927 97 aaKnown RBP11.52□□□□□ -0.57
PTP4A3-203ENST00000520105 PRO0628Q9UI54 55 aa11.52□□□□□ -0.57
PTP4A3-203ENST00000520105 MP68P56378 58 aa11.49□□□□□ -0.57
PTP4A3-203ENST00000520105 H3BPC8 53 aa11.48□□□□□ -0.57
PTP4A3-203ENST00000520105 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
PTP4A3-203ENST00000520105 Q5W150 140 aa11.46□□□□□ -0.57
PTP4A3-203ENST00000520105 CYP4F30PQ9H0H9 118 aa11.46□□□□□ -0.58
PTP4A3-203ENST00000520105 SEC61GP60059 68 aa11.45□□□□□ -0.58
PTP4A3-203ENST00000520105 ATP11AUNQ6ZP68 121 aa11.44□□□□□ -0.58
PTP4A3-203ENST00000520105 TRAV22A0A0B4J277 110 aa11.41□□□□□ -0.58
PTP4A3-203ENST00000520105 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
PTP4A3-203ENST00000520105 H0Y9P7 68 aa11.36□□□□□ -0.59
PTP4A3-203ENST00000520105 SPANXA2-OT1Q8N9U9 137 aa11.36□□□□□ -0.59
PTP4A3-203ENST00000520105 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
PTP4A3-203ENST00000520105 V9GYY9 64 aa11.35□□□□□ -0.59
PTP4A3-203ENST00000520105 LINC00208Q96KT6 92 aa11.34□□□□□ -0.59
PTP4A3-203ENST00000520105 SEC61BP60468 96 aaKnown RBP11.34□□□□□ -0.59
PTP4A3-203ENST00000520105 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
PTP4A3-203ENST00000520105 UBR4Q5T4S7 5183 aa11.27□□□□□ -0.61
PTP4A3-203ENST00000520105 Q1T7F1 81 aa11.27□□□□□ -0.61
PTP4A3-203ENST00000520105 MPLKIPQ8TAP9 179 aa11.27□□□□□ -0.61
PTP4A3-203ENST00000520105 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
PTP4A3-203ENST00000520105 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
PTP4A3-203ENST00000520105 SPINK7P58062 85 aa11.21□□□□□ -0.62
PTP4A3-203ENST00000520105 KRTAP4-1Q9BYQ7 146 aa11.19□□□□□ -0.62
PTP4A3-203ENST00000520105 LOC101927531A0A1B0GV80 90 aa11.17□□□□□ -0.62
PTP4A3-203ENST00000520105 MUC2Q02817 5179 aa11.16□□□□□ -0.62
PTP4A3-203ENST00000520105 C7orf65Q6ZTY9 151 aa11.15□□□□□ -0.62
PTP4A3-203ENST00000520105 RNF213Q63HN8 5207 aa11.13□□□□□ -0.63
PTP4A3-203ENST00000520105 BRK1Q8WUW1 75 aa11.1□□□□□ -0.63
PTP4A3-203ENST00000520105 HRES1P13985 223 aa11.02□□□□□ -0.64
PTP4A3-203ENST00000520105 COA5Q86WW8 74 aa11□□□□□ -0.65
PTP4A3-203ENST00000520105 PSPHP1O15172 72 aa10.97□□□□□ -0.65
PTP4A3-203ENST00000520105 A8MUN3 132 aa10.92□□□□□ -0.66
PTP4A3-203ENST00000520105 Q5VV11 94 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms