RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 Q96NJ1 140 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 LRP1BQ9NZR2 4599 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 RPS28P62857 69 aaKnown RBP2.7□□□□□ -1.98
PABPC1-212ENST00000519622 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
PABPC1-212ENST00000519622 DPH3Q96FX2 82 aa2.7□□□□□ -1.98
PABPC1-212ENST00000519622 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
PABPC1-212ENST00000519622 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
PABPC1-212ENST00000519622 PSCAO43653 123 aa2.69□□□□□ -1.98
PABPC1-212ENST00000519622 ASB16-AS1Q495Z4 193 aa2.69□□□□□ -1.98
PABPC1-212ENST00000519622 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
PABPC1-212ENST00000519622 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
PABPC1-212ENST00000519622 RTL8CO15255 209 aa2.68□□□□□ -1.98
PABPC1-212ENST00000519622 CDK2AP2O75956 126 aa2.68□□□□□ -1.98
PABPC1-212ENST00000519622 Q5XG85 94 aa2.68□□□□□ -1.98
PABPC1-212ENST00000519622 HIGD2AQ9BW72 106 aa2.68□□□□□ -1.98
PABPC1-212ENST00000519622 SNURFQ9Y675 71 aa2.68□□□□□ -1.98
PABPC1-212ENST00000519622 A0A087WSZ3 146 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 J3KT08 172 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 TMEM254Q8TBM7 123 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 RYR2Q92736 4967 aa2.67□□□□□ -1.98
PABPC1-212ENST00000519622 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 FAM236DA0A1B0GTK5 79 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 F8WEM9 126 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 FAM236CP0DP71 79 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 UBE2AP49459 152 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 RPL37AP61513 92 aaKnown RBP2.66□□□□□ -1.98
PABPC1-212ENST00000519622 MOBPQ13875 183 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 Q6ZSA8 131 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 LINC00474Q9P2X8 69 aa2.66□□□□□ -1.98
PABPC1-212ENST00000519622 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
PABPC1-212ENST00000519622 IGLV7-46A0A075B6I9 117 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP16-1A8MUX0 517 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 HCG22E2RYF7 251 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 PKIGQ9Y2B9 76 aa2.65□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
PABPC1-212ENST00000519622 FAM229BQ4G0N7 80 aa2.64□□□□□ -1.99
PABPC1-212ENST00000519622 FP248Q71RG6 208 aaPredicted RBP2.64□□□□□ -1.99
PABPC1-212ENST00000519622 PRR15Q8IV56 129 aa2.64□□□□□ -1.99
PABPC1-212ENST00000519622 ANAPC11Q9NYG5 84 aa2.64□□□□□ -1.99
PABPC1-212ENST00000519622 VPS13BQ7Z7G8 4022 aa2.64□□□□□ -1.99
PABPC1-212ENST00000519622 TGP01266 2768 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 A8MWP4 228 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 ZNF861PO60384 105 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 SERP1Q9Y6X1 66 aa2.63□□□□□ -1.99
PABPC1-212ENST00000519622 NDUFC1O43677 76 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 IGLV7-43P04211 117 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP21-3Q3LHN1 58 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 C1orf134Q5TEV5 83 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 PKHD1P08F94 4074 aa2.62□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP1-4P0C5Y4 121 aa2.61□□□□□ -1.99
PABPC1-212ENST00000519622 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
PABPC1-212ENST00000519622 CIRBP-AS1Q8TBR5 109 aa2.61□□□□□ -1.99
PABPC1-212ENST00000519622 TRAV22A0A0B4J277 110 aa2.6□□□□□ -1.99
PABPC1-212ENST00000519622 hDV103S1A0JD37 113 aa2.6□□□□□ -1.99
PABPC1-212ENST00000519622 C4orf26Q17RF5 130 aa2.6□□□□□ -1.99
PABPC1-212ENST00000519622 CASC2Q6XLA1 102 aa2.6□□□□□ -1.99
PABPC1-212ENST00000519622 CYP4F30PQ9H0H9 118 aa2.6□□□□□ -1.99
PABPC1-212ENST00000519622 KRTAP10-4P60372 401 aaPredicted RBP2.59□□□□□ -1.99
PABPC1-212ENST00000519622 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
PABPC1-212ENST00000519622 ZNF706Q9Y5V0 76 aaPredicted RBP2.59□□□□□ -1.99
PABPC1-212ENST00000519622 A0A1B0GVX0 72 aa2.58□□□□□ -2
PABPC1-212ENST00000519622 LY6G6CO95867 125 aa2.58□□□□□ -2
PABPC1-212ENST00000519622 C5orf47Q569G3 176 aa2.58□□□□□ -2
PABPC1-212ENST00000519622 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
PABPC1-212ENST00000519622 A0A1B0GVY2 172 aa2.57□□□□□ -2
PABPC1-212ENST00000519622 H0Y9P7 68 aa2.57□□□□□ -2
PABPC1-212ENST00000519622 CD164Q04900 197 aa2.57□□□□□ -2
PABPC1-212ENST00000519622 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
PABPC1-212ENST00000519622 HRCT1Q6UXD1 115 aa2.57□□□□□ -2
PABPC1-212ENST00000519622 SMIM26A0A096LP01 95 aa2.56□□□□□ -2
PABPC1-212ENST00000519622 H3BPC8 53 aa2.56□□□□□ -2
PABPC1-212ENST00000519622 C1orf64Q8NEQ6 169 aa2.56□□□□□ -2
PABPC1-212ENST00000519622 FAT1Q14517 4588 aa2.56□□□□□ -2
PABPC1-212ENST00000519622 Q5W150 140 aa2.55□□□□□ -2
PABPC1-212ENST00000519622 SPANXA2-OT1Q8N9U9 137 aa2.55□□□□□ -2
PABPC1-212ENST00000519622 LINC00208Q96KT6 92 aa2.55□□□□□ -2
PABPC1-212ENST00000519622 KMT2CQ8NEZ4 4911 aaKnown RBP2.55□□□□□ -2
PABPC1-212ENST00000519622 TNXBP22105 4242 aa2.54□□□□□ -2
PABPC1-212ENST00000519622 C1orf195Q5TG92 126 aa2.54□□□□□ -2
PABPC1-212ENST00000519622 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
PABPC1-212ENST00000519622 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
PABPC1-212ENST00000519622 RYR1P21817 5038 aa2.53□□□□□ -2
PABPC1-212ENST00000519622 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
PABPC1-212ENST00000519622 PRR4Q16378 134 aa2.53□□□□□ -2
PABPC1-212ENST00000519622 HSPG2P98160 4391 aa2.53□□□□□ -2
PABPC1-212ENST00000519622 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
PABPC1-212ENST00000519622 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
PABPC1-212ENST00000519622 LINC00336Q6ZUF6 198 aa2.52□□□□□ -2.01
PABPC1-212ENST00000519622 FAT3Q8TDW7 4589 aa2.51□□□□□ -2.01
PABPC1-212ENST00000519622 RYR3Q15413 4870 aa2.51□□□□□ -2.01
PABPC1-212ENST00000519622 NDUFB1O75438 58 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms