RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 Q6ZR54 194 aa5.05□□□□□ -1.6
CTNNA1-210ENST00000518825 A0A087X002 238 aa5.04□□□□□ -1.6
CTNNA1-210ENST00000518825 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
CTNNA1-210ENST00000518825 PLAC8Q9NZF1 115 aa5.03□□□□□ -1.6
CTNNA1-210ENST00000518825 FAT2Q9NYQ8 4349 aa5.03□□□□□ -1.6
CTNNA1-210ENST00000518825 H3BPC8 53 aa5.02□□□□□ -1.61
CTNNA1-210ENST00000518825 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
CTNNA1-210ENST00000518825 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
CTNNA1-210ENST00000518825 C8orf17Q9NRJ1 99 aa5.02□□□□□ -1.61
CTNNA1-210ENST00000518825 A8MUN3 132 aa5.01□□□□□ -1.61
CTNNA1-210ENST00000518825 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
CTNNA1-210ENST00000518825 ZNF861PO60384 105 aa5.01□□□□□ -1.61
CTNNA1-210ENST00000518825 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
CTNNA1-210ENST00000518825 IGHV6-1A0A0B4J1U7 121 aa5□□□□□ -1.61
CTNNA1-210ENST00000518825 A0A1B0GVX0 72 aa4.99□□□□□ -1.61
CTNNA1-210ENST00000518825 VPS13BQ7Z7G8 4022 aa4.99□□□□□ -1.61
CTNNA1-210ENST00000518825 IGLV7-46A0A075B6I9 117 aa4.98□□□□□ -1.61
CTNNA1-210ENST00000518825 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
CTNNA1-210ENST00000518825 PCOTHQ58A44 107 aa4.97□□□□□ -1.61
CTNNA1-210ENST00000518825 ZNF706Q9Y5V0 76 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-210ENST00000518825 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-210ENST00000518825 Q5VV11 94 aa4.96□□□□□ -1.62
CTNNA1-210ENST00000518825 IGLV7-43P04211 117 aa4.96□□□□□ -1.62
CTNNA1-210ENST00000518825 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
CTNNA1-210ENST00000518825 A6NED7 52 aa4.95□□□□□ -1.62
CTNNA1-210ENST00000518825 Q5W150 140 aa4.95□□□□□ -1.62
CTNNA1-210ENST00000518825 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
CTNNA1-210ENST00000518825 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
CTNNA1-210ENST00000518825 COA5Q86WW8 74 aa4.94□□□□□ -1.62
CTNNA1-210ENST00000518825 KRTAP10-2P60368 255 aa4.94□□□□□ -1.62
CTNNA1-210ENST00000518825 NDUFS5O43920 106 aa4.93□□□□□ -1.62
CTNNA1-210ENST00000518825 C1orf134Q5TEV5 83 aa4.93□□□□□ -1.62
CTNNA1-210ENST00000518825 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
CTNNA1-210ENST00000518825 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
CTNNA1-210ENST00000518825 CIRBP-AS1Q8TBR5 109 aa4.92□□□□□ -1.62
CTNNA1-210ENST00000518825 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
CTNNA1-210ENST00000518825 PRR26Q8N8Z3 221 aa4.92□□□□□ -1.62
CTNNA1-210ENST00000518825 PRAC1Q96KF2 57 aa4.9□□□□□ -1.62
CTNNA1-210ENST00000518825 HRES1P13985 223 aa4.9□□□□□ -1.63
CTNNA1-210ENST00000518825 CDK2AP2O75956 126 aa4.89□□□□□ -1.63
CTNNA1-210ENST00000518825 LY6G6CO95867 125 aa4.89□□□□□ -1.63
CTNNA1-210ENST00000518825 KRTAP13-2Q52LG2 175 aa4.89□□□□□ -1.63
CTNNA1-210ENST00000518825 LIMD2Q9BT23 127 aa4.88□□□□□ -1.63
CTNNA1-210ENST00000518825 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
CTNNA1-210ENST00000518825 KRTAP10-1P60331 282 aa4.86□□□□□ -1.63
CTNNA1-210ENST00000518825 Q6ZSA8 131 aa4.86□□□□□ -1.63
CTNNA1-210ENST00000518825 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
CTNNA1-210ENST00000518825 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
CTNNA1-210ENST00000518825 LCA10Q71F78 164 aa4.85□□□□□ -1.63
CTNNA1-210ENST00000518825 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
CTNNA1-210ENST00000518825 Q75L30 129 aa4.85□□□□□ -1.63
CTNNA1-210ENST00000518825 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
CTNNA1-210ENST00000518825 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
CTNNA1-210ENST00000518825 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
CTNNA1-210ENST00000518825 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
CTNNA1-210ENST00000518825 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
CTNNA1-210ENST00000518825 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
CTNNA1-210ENST00000518825 LINC00313P59037 77 aa4.81□□□□□ -1.64
CTNNA1-210ENST00000518825 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
CTNNA1-210ENST00000518825 SPINK7P58062 85 aa4.79□□□□□ -1.64
CTNNA1-210ENST00000518825 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-210ENST00000518825 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
CTNNA1-210ENST00000518825 A6NN06 94 aa4.78□□□□□ -1.64
CTNNA1-210ENST00000518825 FAT1Q14517 4588 aa4.78□□□□□ -1.65
CTNNA1-210ENST00000518825 DMAC1Q96GE9 116 aa4.77□□□□□ -1.65
CTNNA1-210ENST00000518825 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
CTNNA1-210ENST00000518825 KRTAP3-3Q9BYR6 98 aa4.76□□□□□ -1.65
CTNNA1-210ENST00000518825 KRTAP3-2Q9BYR7 98 aa4.76□□□□□ -1.65
CTNNA1-210ENST00000518825 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
CTNNA1-210ENST00000518825 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
CTNNA1-210ENST00000518825 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
CTNNA1-210ENST00000518825 ACYP2P14621 99 aa4.74□□□□□ -1.65
CTNNA1-210ENST00000518825 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-210ENST00000518825 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
CTNNA1-210ENST00000518825 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
CTNNA1-210ENST00000518825 SPINK1P00995 79 aa4.67□□□□□ -1.66
CTNNA1-210ENST00000518825 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
CTNNA1-210ENST00000518825 RYR2Q92736 4967 aa4.66□□□□□ -1.66
CTNNA1-210ENST00000518825 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
CTNNA1-210ENST00000518825 SMR3BP02814 79 aaPredicted RBP4.64□□□□□ -1.67
CTNNA1-210ENST00000518825 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
CTNNA1-210ENST00000518825 A0A1B0GU69 56 aa4.62□□□□□ -1.67
CTNNA1-210ENST00000518825 LINC00304Q8N9R0 145 aa4.62□□□□□ -1.67
CTNNA1-210ENST00000518825 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-210ENST00000518825 Q8N1X5 172 aa4.61□□□□□ -1.67
CTNNA1-210ENST00000518825 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-210ENST00000518825 TNXBP22105 4242 aa4.6□□□□□ -1.67
CTNNA1-210ENST00000518825 A0A1B0GVY2 172 aa4.59□□□□□ -1.67
CTNNA1-210ENST00000518825 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
CTNNA1-210ENST00000518825 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
CTNNA1-210ENST00000518825 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
CTNNA1-210ENST00000518825 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-210ENST00000518825 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
CTNNA1-210ENST00000518825 FLG2Q5D862 2391 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-210ENST00000518825 HSPG2P98160 4391 aa4.57□□□□□ -1.68
CTNNA1-210ENST00000518825 A8MUU9 505 aa4.56□□□□□ -1.68
CTNNA1-210ENST00000518825 C20orf166-AS1Q96NR2 134 aa4.56□□□□□ -1.68
CTNNA1-210ENST00000518825 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
CTNNA1-210ENST00000518825 UQCR11O14957 56 aa4.53□□□□□ -1.68
CTNNA1-210ENST00000518825 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms