RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 KIAA0586Q9BVV6 1533 aa-0.66□□□□□ -2.52
RNU6-840P-201ENST00000517275 DNAH1Q9P2D7 4330 aa-0.66□□□□□ -2.52
RNU6-840P-201ENST00000517275 CEP290O15078 2479 aa-0.66□□□□□ -2.52
RNU6-840P-201ENST00000517275 PARP4Q9UKK3 1724 aaKnown RBP-0.67□□□□□ -2.52
RNU6-840P-201ENST00000517275 UTP20O75691 2785 aaKnown RBP-0.67□□□□□ -2.52
RNU6-840P-201ENST00000517275 UGGT2Q9NYU1 1516 aa-0.67□□□□□ -2.52
RNU6-840P-201ENST00000517275 WT1-ASQ06250 92 aa-0.67□□□□□ -2.52
RNU6-840P-201ENST00000517275 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.68□□□□□ -2.52
RNU6-840P-201ENST00000517275 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
RNU6-840P-201ENST00000517275 NHSQ6T4R5 1651 aa-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 NRAPQ86VF7 1730 aa-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 MYO5CQ9NQX4 1742 aa-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 RPS27P42677 84 aaKnown RBP-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 RPS27LQ71UM5 84 aaKnown RBP-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 LRRIQ1Q96JM4 1722 aa-0.69□□□□□ -2.52
RNU6-840P-201ENST00000517275 DEFB106AQ8N104 65 aa-0.7□□□□□ -2.52
RNU6-840P-201ENST00000517275 LRRK2Q5S007 2527 aa-0.7□□□□□ -2.52
RNU6-840P-201ENST00000517275 USH2AO75445 5202 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 ITSN2Q9NZM3 1697 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 FAM186AA6NE01 2351 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 HILPDAQ9Y5L2 63 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 ASXL1Q8IXJ9 1541 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 MYO18BQ8IUG5 2567 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 IQGAP3Q86VI3 1631 aa-0.71□□□□□ -2.52
RNU6-840P-201ENST00000517275 NBEAL2Q6ZNJ1 2754 aa-0.72□□□□□ -2.52
RNU6-840P-201ENST00000517275 ITPR3Q14573 2671 aa-0.73□□□□□ -2.53
RNU6-840P-201ENST00000517275 MINOS1Q5TGZ0 78 aa-0.73□□□□□ -2.53
RNU6-840P-201ENST00000517275 DNAH8Q96JB1 4490 aa-0.74□□□□□ -2.53
RNU6-840P-201ENST00000517275 WDR87Q6ZQQ6 2873 aa-0.74□□□□□ -2.53
RNU6-840P-201ENST00000517275 ABCC6O95255 1503 aa-0.74□□□□□ -2.53
RNU6-840P-201ENST00000517275 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-840P-201ENST00000517275 TRIOO75962 3097 aa-0.75□□□□□ -2.53
RNU6-840P-201ENST00000517275 DNMBPQ6XZF7 1577 aa-0.76□□□□□ -2.53
RNU6-840P-201ENST00000517275 ABCA9Q8IUA7 1624 aa-0.76□□□□□ -2.53
RNU6-840P-201ENST00000517275 MGAM2Q2M2H8 2515 aa-0.76□□□□□ -2.53
RNU6-840P-201ENST00000517275 RANBP2P49792 3224 aaKnown RBP-0.76□□□□□ -2.53
RNU6-840P-201ENST00000517275 C6orf48Q9UBA6 75 aa-0.77□□□□□ -2.53
RNU6-840P-201ENST00000517275 ACACAQ13085 2346 aa-0.77□□□□□ -2.53
RNU6-840P-201ENST00000517275 C3P01024 1663 aa-0.78□□□□□ -2.53
RNU6-840P-201ENST00000517275 IGLV5-48A0A075B6I7 105 aa-0.78□□□□□ -2.53
RNU6-840P-201ENST00000517275 MT4P47944 62 aa-0.78□□□□□ -2.53
RNU6-840P-201ENST00000517275 GNG13Q9P2W3 67 aa-0.78□□□□□ -2.53
RNU6-840P-201ENST00000517275 KIF1AQ12756 1690 aa-0.78□□□□□ -2.53
RNU6-840P-201ENST00000517275 H3BUA1 57 aa-0.79□□□□□ -2.54
RNU6-840P-201ENST00000517275 K7EMI3 77 aa-0.79□□□□□ -2.54
RNU6-840P-201ENST00000517275 KRTAP20-2Q3LI61 65 aa-0.79□□□□□ -2.54
RNU6-840P-201ENST00000517275 TOGARAM1Q9Y4F4 1720 aa-0.79□□□□□ -2.54
RNU6-840P-201ENST00000517275 ACACBO00763 2458 aa-0.8□□□□□ -2.54
RNU6-840P-201ENST00000517275 CLASP1Q7Z460 1538 aa-0.8□□□□□ -2.54
RNU6-840P-201ENST00000517275 LINC01549A6NIU2 74 aa-0.81□□□□□ -2.54
RNU6-840P-201ENST00000517275 MMP24-AS1A0A0U1RRL7 71 aa-0.82□□□□□ -2.54
RNU6-840P-201ENST00000517275 DEFB110Q30KQ9 67 aa-0.82□□□□□ -2.54
RNU6-840P-201ENST00000517275 KRTAP19-5Q3LI72 72 aa-0.82□□□□□ -2.54
RNU6-840P-201ENST00000517275 HERC2O95714 4834 aa-0.82□□□□□ -2.54
RNU6-840P-201ENST00000517275 EPPK1P58107 5090 aaKnown RBP-0.82□□□□□ -2.54
RNU6-840P-201ENST00000517275 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.83□□□□□ -2.54
RNU6-840P-201ENST00000517275 ANKRD36CQ5JPF3 1778 aa-0.83□□□□□ -2.54
RNU6-840P-201ENST00000517275 RIF1Q5UIP0 2472 aaKnown RBP-0.84□□□□□ -2.54
RNU6-840P-201ENST00000517275 CCDC168Q8NDH2 2452 aa-0.84□□□□□ -2.54
RNU6-840P-201ENST00000517275 MT1HP80294 61 aa-0.85□□□□□ -2.55
RNU6-840P-201ENST00000517275 NCBP2-AS2Q69YL0 99 aa-0.85□□□□□ -2.55
RNU6-840P-201ENST00000517275 RELNP78509 3460 aa-0.85□□□□□ -2.55
RNU6-840P-201ENST00000517275 EFCAB5A4FU69 1503 aa-0.85□□□□□ -2.55
RNU6-840P-201ENST00000517275 A0A0C4DFX4 3053 aa-0.85□□□□□ -2.55
RNU6-840P-201ENST00000517275 USP9YO00507 2555 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-840P-201ENST00000517275 A0A087WWC5 75 aa-0.86□□□□□ -2.55
RNU6-840P-201ENST00000517275 NOP10Q9NPE3 64 aaKnown RBP-0.86□□□□□ -2.55
RNU6-840P-201ENST00000517275 FCER1GP30273 86 aa-0.87□□□□□ -2.55
RNU6-840P-201ENST00000517275 SPENQ96T58 3664 aaKnown RBP-0.87□□□□□ -2.55
RNU6-840P-201ENST00000517275 MROH1Q8NDA8 1641 aa-0.87□□□□□ -2.55
RNU6-840P-201ENST00000517275 COL12A1Q99715 3063 aa-0.87□□□□□ -2.55
RNU6-840P-201ENST00000517275 PLECQ15149 4684 aaKnown RBP-0.88□□□□□ -2.55
RNU6-840P-201ENST00000517275 FRYQ5TBA9 3013 aa-0.88□□□□□ -2.55
RNU6-840P-201ENST00000517275 SPTBN5Q9NRC6 3674 aaKnown RBP-0.88□□□□□ -2.55
RNU6-840P-201ENST00000517275 RYR1P21817 5038 aa-0.89□□□□□ -2.55
RNU6-840P-201ENST00000517275 TNP1P09430 55 aa-0.89□□□□□ -2.55
RNU6-840P-201ENST00000517275 MADDQ8WXG6 1647 aa-0.9□□□□□ -2.55
RNU6-840P-201ENST00000517275 TIAM1Q13009 1591 aa-0.91□□□□□ -2.55
RNU6-840P-201ENST00000517275 SERF2P84101 59 aa-0.91□□□□□ -2.56
RNU6-840P-201ENST00000517275 NEBP20929 6669 aa-0.92□□□□□ -2.56
RNU6-840P-201ENST00000517275 SFTA3P0C7M3 94 aa-0.92□□□□□ -2.56
RNU6-840P-201ENST00000517275 KRTAP8-1Q8IUC2 63 aa-0.92□□□□□ -2.56
RNU6-840P-201ENST00000517275 ABCA6Q8N139 1617 aa-0.93□□□□□ -2.56
RNU6-840P-201ENST00000517275 NMES1Q9C002 83 aa-0.93□□□□□ -2.56
RNU6-840P-201ENST00000517275 USP9XQ93008 2570 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-840P-201ENST00000517275 GLI2P10070 1586 aa-0.94□□□□□ -2.56
RNU6-840P-201ENST00000517275 IGIPA6NJ69 53 aa-0.94□□□□□ -2.56
RNU6-840P-201ENST00000517275 M0R1W7 72 aa-0.94□□□□□ -2.56
RNU6-840P-201ENST00000517275 TLN2Q9Y4G6 2542 aa-0.95□□□□□ -2.56
RNU6-840P-201ENST00000517275 SMR3BP02814 79 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-840P-201ENST00000517275 LY75O60449 1722 aa-0.95□□□□□ -2.56
RNU6-840P-201ENST00000517275 BIRC6Q9NR09 4857 aa-0.96□□□□□ -2.56
RNU6-840P-201ENST00000517275 CMYA5Q8N3K9 4069 aa-0.96□□□□□ -2.56
RNU6-840P-201ENST00000517275 TMEM167BQ9NRX6 74 aa-0.96□□□□□ -2.56
RNU6-840P-201ENST00000517275 DEFB1P60022 68 aa-0.97□□□□□ -2.56
RNU6-840P-201ENST00000517275 CELSR3Q9NYQ7 3312 aa-0.97□□□□□ -2.57
RNU6-840P-201ENST00000517275 ITPR1Q14643 2758 aa-0.97□□□□□ -2.57
RNU6-840P-201ENST00000517275 CROCC2H7BZ55 1655 aa-0.97□□□□□ -2.57
RNU6-840P-201ENST00000517275 MAST1Q9Y2H9 1570 aa-0.98□□□□□ -2.57
RNU6-840P-201ENST00000517275 CLPSL2Q6UWE3 100 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms