RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SPG11Q96JI7 2443 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 C9orf92A6NGG3 77 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 M0QY20 66 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 POLR2KP53803 58 aaKnown RBP0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CCDC168Q8NDH2 2452 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 FLNCQ14315 2725 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 COL6A5A8TX70 2615 aa0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 FLNBO75369 2602 aaKnown RBP0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 MACF1Q9UPN3 7388 aaKnown RBP0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 GCN1Q92616 2671 aaKnown RBP0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 M0QZ58 72 aa0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 A0A0C4DFX4 3053 aa0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 PKD1L1Q8TDX9 2849 aa0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TLN2Q9Y4G6 2542 aa0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TNRC18O15417 2968 aaPredicted RBP0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 RPL39P62891 51 aaKnown RBP0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CLPSL2Q6UWE3 100 aa0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 MUC5BQ9HC84 5762 aaPredicted RBP0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 NF1P21359 2839 aa0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TEP1Q99973 2627 aaKnown RBP0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CEP250Q9BV73 2442 aa0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 USP9YO00507 2555 aaPredicted RBP0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ALMS1Q8TCU4 4167 aa0.19□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CSMD3Q7Z407 3707 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ANKRD11Q6UB99 2663 aaPredicted RBP0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ACACBO00763 2458 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 PRM1P04553 51 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TNP1P09430 55 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SPRR2DP22532 72 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 KRTAP21-1Q3LI58 79 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 FLNAP21333 2647 aaKnown RBP0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 USP9XQ93008 2570 aaPredicted RBP0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TNXBP22105 4242 aa0.18□□□□□ -2.38
SCARNA16.2-201ENST00000516520 MAST4O15021 2626 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 UTP20O75691 2785 aaKnown RBP0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SONP18583 2426 aaKnown RBP0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ZZEF1O43149 2961 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SPRR2BP35325 72 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 RPL39LQ96EH5 51 aaKnown RBP0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ARHGAP5-AS1Q96IT6 56 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 FASNP49327 2511 aaKnown RBP0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TGP01266 2768 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 NBEAL2Q6ZNJ1 2754 aa0.17□□□□□ -2.38
SCARNA16.2-201ENST00000516520 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 ITPR2Q14571 2701 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 MYO18BQ8IUG5 2567 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 H3BNG1 76 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SPTAN1Q13813 2472 aaKnown RBP0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 PDZD2O15018 2839 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 CELSR1Q9NYQ6 3014 aa0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 HRNRQ86YZ3 2850 aaPredicted RBP0.16□□□□□ -2.38
SCARNA16.2-201ENST00000516520 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 SPRR2AP35326 72 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 PRCDQ00LT1 54 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 LINC01590Q5TEZ4 76 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 TOMM7Q9P0U1 55 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MGAM2Q2M2H8 2515 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CFAP46Q8IYW2 2715 aa0.15□□□□□ -2.39
SCARNA16.2-201ENST00000516520 ZANQ9Y493 2812 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 TACC2O95359 2948 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 NBEAQ8NFP9 2946 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 ITPR3Q14573 2671 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MT1AP04731 61 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 DEFB110Q30KQ9 67 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 LEAP2Q969E1 77 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 FRAS1Q86XX4 4008 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 DOPEY1Q5JWR5 2465 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 NBEAL1Q6ZS30 2694 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 COL12A1Q99715 3063 aa0.14□□□□□ -2.39
SCARNA16.2-201ENST00000516520 NEBP20929 6669 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 K7EIM0 57 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 SPART-AS1P0CW21 52 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CHD7Q9P2D1 2997 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 KMT2DO14686 5537 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 DMXL1Q9Y485 3027 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MXRA5Q9NR99 2828 aa0.13□□□□□ -2.39
SCARNA16.2-201ENST00000516520 COL6A3P12111 3177 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CENPEQ02224 2701 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MUC5ACP98088 5654 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 SPRR2EP22531 72 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 TTTY10Q9BZA0 68 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MAP1AP78559 2803 aaPredicted RBP0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MDN1Q9NU22 5596 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CRYBG3Q68DQ2 2970 aa0.12□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CEP295Q9C0D2 2601 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 CELSR3Q9NYQ7 3312 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms