RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 PLA2G1BP04054 148 aaKnown RBP8.91□□□□□ -0.98
SDHA-218ENST00000515752 LIMD2Q9BT23 127 aa8.9□□□□□ -0.98
SDHA-218ENST00000515752 SERP1Q9Y6X1 66 aa8.88□□□□□ -0.99
SDHA-218ENST00000515752 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
SDHA-218ENST00000515752 H0Y9P7 68 aa8.87□□□□□ -0.99
SDHA-218ENST00000515752 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
SDHA-218ENST00000515752 TYMSOSQ8TAI1 123 aa8.86□□□□□ -0.99
SDHA-218ENST00000515752 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
SDHA-218ENST00000515752 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
SDHA-218ENST00000515752 SPINK1P00995 79 aa8.84□□□□□ -0.99
SDHA-218ENST00000515752 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
SDHA-218ENST00000515752 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
SDHA-218ENST00000515752 C1orf195Q5TG92 126 aa8.82□□□□□ -1
SDHA-218ENST00000515752 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
SDHA-218ENST00000515752 NDUFS5O43920 106 aa8.8□□□□□ -1
SDHA-218ENST00000515752 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
SDHA-218ENST00000515752 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
SDHA-218ENST00000515752 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
SDHA-218ENST00000515752 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
SDHA-218ENST00000515752 LINC00313P59037 77 aa8.77□□□□□ -1
SDHA-218ENST00000515752 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1
SDHA-218ENST00000515752 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
SDHA-218ENST00000515752 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
SDHA-218ENST00000515752 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
SDHA-218ENST00000515752 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
SDHA-218ENST00000515752 OXTP01178 125 aa8.73□□□□□ -1.01
SDHA-218ENST00000515752 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
SDHA-218ENST00000515752 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
SDHA-218ENST00000515752 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
SDHA-218ENST00000515752 J3QL48 77 aa8.73□□□□□ -1.01
SDHA-218ENST00000515752 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
SDHA-218ENST00000515752 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
SDHA-218ENST00000515752 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
SDHA-218ENST00000515752 RYR2Q92736 4967 aa8.68□□□□□ -1.02
SDHA-218ENST00000515752 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
SDHA-218ENST00000515752 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
SDHA-218ENST00000515752 IGLV7-46A0A075B6I9 117 aa8.63□□□□□ -1.03
SDHA-218ENST00000515752 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
SDHA-218ENST00000515752 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
SDHA-218ENST00000515752 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
SDHA-218ENST00000515752 Q5W150 140 aa8.6□□□□□ -1.03
SDHA-218ENST00000515752 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
SDHA-218ENST00000515752 PRR4Q16378 134 aa8.59□□□□□ -1.03
SDHA-218ENST00000515752 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
SDHA-218ENST00000515752 SVIPQ8NHG7 77 aa8.57□□□□□ -1.04
SDHA-218ENST00000515752 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SDHA-218ENST00000515752 FAT1Q14517 4588 aa8.53□□□□□ -1.04
SDHA-218ENST00000515752 Q5VSD8 79 aa8.52□□□□□ -1.04
SDHA-218ENST00000515752 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
SDHA-218ENST00000515752 C4orf26Q17RF5 130 aa8.48□□□□□ -1.05
SDHA-218ENST00000515752 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
SDHA-218ENST00000515752 Q1T7F1 81 aa8.45□□□□□ -1.06
SDHA-218ENST00000515752 V9GYY9 64 aa8.45□□□□□ -1.06
SDHA-218ENST00000515752 COA5Q86WW8 74 aa8.45□□□□□ -1.06
SDHA-218ENST00000515752 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
SDHA-218ENST00000515752 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
SDHA-218ENST00000515752 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
SDHA-218ENST00000515752 HRES1P13985 223 aa8.41□□□□□ -1.06
SDHA-218ENST00000515752 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
SDHA-218ENST00000515752 A8MUU9 505 aa8.4□□□□□ -1.07
SDHA-218ENST00000515752 ACYP2P14621 99 aa8.4□□□□□ -1.07
SDHA-218ENST00000515752 Q8N1X5 172 aa8.4□□□□□ -1.07
SDHA-218ENST00000515752 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
SDHA-218ENST00000515752 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
SDHA-218ENST00000515752 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
SDHA-218ENST00000515752 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
SDHA-218ENST00000515752 HSPG2P98160 4391 aa8.34□□□□□ -1.07
SDHA-218ENST00000515752 RYR3Q15413 4870 aa8.34□□□□□ -1.07
SDHA-218ENST00000515752 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
SDHA-218ENST00000515752 Q75L30 129 aa8.31□□□□□ -1.08
SDHA-218ENST00000515752 RYR1P21817 5038 aa8.27□□□□□ -1.09
SDHA-218ENST00000515752 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
SDHA-218ENST00000515752 A8MUN3 132 aa8.25□□□□□ -1.09
SDHA-218ENST00000515752 PSPHP1O15172 72 aa8.23□□□□□ -1.09
SDHA-218ENST00000515752 KRTAP17-1Q9BYP8 105 aa8.22□□□□□ -1.09
SDHA-218ENST00000515752 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
SDHA-218ENST00000515752 TNXBP22105 4242 aa8.21□□□□□ -1.1
SDHA-218ENST00000515752 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
SDHA-218ENST00000515752 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
SDHA-218ENST00000515752 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
SDHA-218ENST00000515752 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
SDHA-218ENST00000515752 SPINK7P58062 85 aa8.17□□□□□ -1.1
SDHA-218ENST00000515752 Q5VV11 94 aa8.17□□□□□ -1.1
SDHA-218ENST00000515752 FAT3Q8TDW7 4589 aa8.16□□□□□ -1.1
SDHA-218ENST00000515752 PRO0628Q9UI54 55 aa8.15□□□□□ -1.1
SDHA-218ENST00000515752 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.11
SDHA-218ENST00000515752 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
SDHA-218ENST00000515752 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
SDHA-218ENST00000515752 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
SDHA-218ENST00000515752 XP32Q5T750 250 aa8.1□□□□□ -1.11
SDHA-218ENST00000515752 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
SDHA-218ENST00000515752 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
SDHA-218ENST00000515752 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
SDHA-218ENST00000515752 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
SDHA-218ENST00000515752 A6NED7 52 aa8.02□□□□□ -1.13
SDHA-218ENST00000515752 A0A1B0GU69 56 aa8.01□□□□□ -1.13
SDHA-218ENST00000515752 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
SDHA-218ENST00000515752 MYCBP2O75592 4640 aa7.99□□□□□ -1.13
SDHA-218ENST00000515752 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.13
SDHA-218ENST00000515752 SEC61GP60059 68 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms