RNA–Protein interactions for RNA: ENST00000514170.5

CNGA1-207, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA1, Length 2,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-207ENST00000514170 C9orf163Q8N9P6 203 aa3.6□□□□□ -1.83
CNGA1-207ENST00000514170 C6orf48Q9UBA6 75 aa3.6□□□□□ -1.83
CNGA1-207ENST00000514170 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
CNGA1-207ENST00000514170 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 C1orf137Q5JT78 98 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 XAGE1AQ9HD64 81 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
CNGA1-207ENST00000514170 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 Q6ZR54 194 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 APLNQ9ULZ1 77 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 KRTAP29-1A8MX34 341 aaPredicted RBP3.57□□□□□ -1.84
CNGA1-207ENST00000514170 H0Y9P7 68 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 C1orf134Q5TEV5 83 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
CNGA1-207ENST00000514170 PKD1P98161 4303 aa3.55□□□□□ -1.84
CNGA1-207ENST00000514170 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
CNGA1-207ENST00000514170 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
CNGA1-207ENST00000514170 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
CNGA1-207ENST00000514170 WFDC13Q8IUB5 93 aa3.55□□□□□ -1.84
CNGA1-207ENST00000514170 DEFB105AQ8NG35 78 aa3.55□□□□□ -1.84
CNGA1-207ENST00000514170 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
CNGA1-207ENST00000514170 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
CNGA1-207ENST00000514170 ROMO1P60602 79 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 Q6ZRX8 168 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 IGKV2-24A0A0C4DH68 120 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 LELP1Q5T871 98 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 CAMK2N2Q96S95 79 aa3.53□□□□□ -1.84
CNGA1-207ENST00000514170 DNAH17Q9UFH2 4485 aa3.52□□□□□ -1.85
CNGA1-207ENST00000514170 KRTAP4-16G5E9R7 235 aaPredicted RBP3.52□□□□□ -1.85
CNGA1-207ENST00000514170 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
CNGA1-207ENST00000514170 SPRR1AP35321 89 aa3.52□□□□□ -1.85
CNGA1-207ENST00000514170 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
CNGA1-207ENST00000514170 KRTAP10-2P60368 255 aa3.52□□□□□ -1.85
CNGA1-207ENST00000514170 PLA2G2DQ9UNK4 145 aa3.52□□□□□ -1.85
CNGA1-207ENST00000514170 HSPG2P98160 4391 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 DNAH8Q96JB1 4490 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
CNGA1-207ENST00000514170 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
CNGA1-207ENST00000514170 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
CNGA1-207ENST00000514170 HRES1P13985 223 aa3.5□□□□□ -1.85
CNGA1-207ENST00000514170 LRP1Q07954 4544 aaKnown RBP3.5□□□□□ -1.85
CNGA1-207ENST00000514170 HERC1Q15751 4861 aa3.5□□□□□ -1.85
CNGA1-207ENST00000514170 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
CNGA1-207ENST00000514170 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
CNGA1-207ENST00000514170 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
CNGA1-207ENST00000514170 A8MWP4 228 aa3.48□□□□□ -1.85
CNGA1-207ENST00000514170 KRTAP26-1Q6PEX3 210 aa3.48□□□□□ -1.85
CNGA1-207ENST00000514170 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
CNGA1-207ENST00000514170 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
CNGA1-207ENST00000514170 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
CNGA1-207ENST00000514170 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 HERC2O95714 4834 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 RPL37AP8A6NKH3 93 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 P0C880 135 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
CNGA1-207ENST00000514170 A0A087WSZ3 146 aa3.46□□□□□ -1.86
CNGA1-207ENST00000514170 RPL37AP61513 92 aaKnown RBP3.46□□□□□ -1.86
CNGA1-207ENST00000514170 PANO1I0J062 215 aa3.45□□□□□ -1.86
CNGA1-207ENST00000514170 LINC01556Q5JQF7 62 aa3.45□□□□□ -1.86
CNGA1-207ENST00000514170 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
CNGA1-207ENST00000514170 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
CNGA1-207ENST00000514170 IGLV5-52A0A0A0MRZ9 124 aa3.44□□□□□ -1.86
CNGA1-207ENST00000514170 ZNF861PO60384 105 aa3.44□□□□□ -1.86
CNGA1-207ENST00000514170 FAM168BA1KXE4 195 aa3.44□□□□□ -1.86
CNGA1-207ENST00000514170 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
CNGA1-207ENST00000514170 A0A087WTM6 91 aa3.43□□□□□ -1.86
CNGA1-207ENST00000514170 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
CNGA1-207ENST00000514170 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
CNGA1-207ENST00000514170 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CNGA1-207ENST00000514170 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
CNGA1-207ENST00000514170 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
CNGA1-207ENST00000514170 KRTAP10-1P60331 282 aa3.42□□□□□ -1.86
CNGA1-207ENST00000514170 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
CNGA1-207ENST00000514170 Q6ZRN7 208 aaPredicted RBP3.42□□□□□ -1.86
CNGA1-207ENST00000514170 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
CNGA1-207ENST00000514170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.41□□□□□ -1.86
CNGA1-207ENST00000514170 H3BNG1 76 aa3.41□□□□□ -1.86
CNGA1-207ENST00000514170 SPRR1BP22528 89 aa3.4□□□□□ -1.86
CNGA1-207ENST00000514170 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CNGA1-207ENST00000514170 UQCR11O14957 56 aa3.4□□□□□ -1.87
CNGA1-207ENST00000514170 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
CNGA1-207ENST00000514170 A0A096LNI7 61 aa3.39□□□□□ -1.87
CNGA1-207ENST00000514170 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
CNGA1-207ENST00000514170 ACYP2P14621 99 aa3.38□□□□□ -1.87
CNGA1-207ENST00000514170 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
CNGA1-207ENST00000514170 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms