RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
TPM3-221ENST00000513769 SPAG11AQ6PDA7 123 aa5.81□□□□□ -1.48
TPM3-221ENST00000513769 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
TPM3-221ENST00000513769 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
TPM3-221ENST00000513769 IGKV3D-7A0A0C4DH55 119 aa5.8□□□□□ -1.48
TPM3-221ENST00000513769 A0A0G2JQZ4 141 aa5.79□□□□□ -1.48
TPM3-221ENST00000513769 SPINK1P00995 79 aa5.79□□□□□ -1.48
TPM3-221ENST00000513769 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
TPM3-221ENST00000513769 A0A087X002 238 aa5.78□□□□□ -1.48
TPM3-221ENST00000513769 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
TPM3-221ENST00000513769 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
TPM3-221ENST00000513769 TYMSOSQ8TAI1 123 aa5.78□□□□□ -1.48
TPM3-221ENST00000513769 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
TPM3-221ENST00000513769 NDUFB1O75438 58 aa5.76□□□□□ -1.49
TPM3-221ENST00000513769 LRP1BQ9NZR2 4599 aa5.75□□□□□ -1.49
TPM3-221ENST00000513769 DSCR10P59022 87 aa5.75□□□□□ -1.49
TPM3-221ENST00000513769 Q5VSD8 79 aa5.75□□□□□ -1.49
TPM3-221ENST00000513769 LIMD2Q9BT23 127 aa5.75□□□□□ -1.49
TPM3-221ENST00000513769 HERC1Q15751 4861 aa5.74□□□□□ -1.49
TPM3-221ENST00000513769 A8MWP4 228 aa5.74□□□□□ -1.49
TPM3-221ENST00000513769 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
TPM3-221ENST00000513769 ATOX1O00244 68 aa5.73□□□□□ -1.49
TPM3-221ENST00000513769 HRCT1Q6UXD1 115 aa5.73□□□□□ -1.49
TPM3-221ENST00000513769 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
TPM3-221ENST00000513769 IGKV4-1P06312 121 aa5.72□□□□□ -1.49
TPM3-221ENST00000513769 Q96NJ1 140 aa5.72□□□□□ -1.49
TPM3-221ENST00000513769 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
TPM3-221ENST00000513769 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
TPM3-221ENST00000513769 FAM236AA0A1B0GUQ0 79 aa5.7□□□□□ -1.5
TPM3-221ENST00000513769 FAM236BA0A1B0GV22 79 aa5.7□□□□□ -1.5
TPM3-221ENST00000513769 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
TPM3-221ENST00000513769 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
TPM3-221ENST00000513769 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
TPM3-221ENST00000513769 A0A087WVE0 104 aa5.68□□□□□ -1.5
TPM3-221ENST00000513769 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
TPM3-221ENST00000513769 FLG2Q5D862 2391 aaPredicted RBP5.67□□□□□ -1.5
TPM3-221ENST00000513769 K7EQZ3 153 aa5.67□□□□□ -1.5
TPM3-221ENST00000513769 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
TPM3-221ENST00000513769 HCG22E2RYF7 251 aa5.66□□□□□ -1.5
TPM3-221ENST00000513769 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
TPM3-221ENST00000513769 A0A1B0GVX0 72 aa5.65□□□□□ -1.5
TPM3-221ENST00000513769 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
TPM3-221ENST00000513769 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TPM3-221ENST00000513769 Q8N9L7 120 aa5.65□□□□□ -1.5
TPM3-221ENST00000513769 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
TPM3-221ENST00000513769 OXTP01178 125 aa5.64□□□□□ -1.51
TPM3-221ENST00000513769 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
TPM3-221ENST00000513769 UQCRQO14949 82 aa5.63□□□□□ -1.51
TPM3-221ENST00000513769 COX7CP15954 63 aa5.62□□□□□ -1.51
TPM3-221ENST00000513769 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
TPM3-221ENST00000513769 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
TPM3-221ENST00000513769 LINC00313P59037 77 aa5.61□□□□□ -1.51
TPM3-221ENST00000513769 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
TPM3-221ENST00000513769 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
TPM3-221ENST00000513769 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
TPM3-221ENST00000513769 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
TPM3-221ENST00000513769 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
TPM3-221ENST00000513769 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
TPM3-221ENST00000513769 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.51
TPM3-221ENST00000513769 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
TPM3-221ENST00000513769 FAT1Q14517 4588 aa5.58□□□□□ -1.52
TPM3-221ENST00000513769 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
TPM3-221ENST00000513769 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
TPM3-221ENST00000513769 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
TPM3-221ENST00000513769 H3BPC8 53 aa5.55□□□□□ -1.52
TPM3-221ENST00000513769 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
TPM3-221ENST00000513769 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
TPM3-221ENST00000513769 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
TPM3-221ENST00000513769 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
TPM3-221ENST00000513769 NDUFC1O43677 76 aa5.51□□□□□ -1.53
TPM3-221ENST00000513769 MP68P56378 58 aa5.51□□□□□ -1.53
TPM3-221ENST00000513769 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
TPM3-221ENST00000513769 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
TPM3-221ENST00000513769 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
TPM3-221ENST00000513769 NDUFS5O43920 106 aa5.47□□□□□ -1.53
TPM3-221ENST00000513769 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
TPM3-221ENST00000513769 TRAV22A0A0B4J277 110 aa5.46□□□□□ -1.54
TPM3-221ENST00000513769 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
TPM3-221ENST00000513769 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.54
TPM3-221ENST00000513769 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
TPM3-221ENST00000513769 SEC61GP60059 68 aa5.44□□□□□ -1.54
TPM3-221ENST00000513769 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
TPM3-221ENST00000513769 H0Y9P7 68 aa5.43□□□□□ -1.54
TPM3-221ENST00000513769 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
TPM3-221ENST00000513769 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
TPM3-221ENST00000513769 A8MUU9 505 aa5.42□□□□□ -1.54
TPM3-221ENST00000513769 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
TPM3-221ENST00000513769 LINC00208Q96KT6 92 aa5.41□□□□□ -1.54
TPM3-221ENST00000513769 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.54
TPM3-221ENST00000513769 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
TPM3-221ENST00000513769 Q75L30 129 aa5.4□□□□□ -1.54
TPM3-221ENST00000513769 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
TPM3-221ENST00000513769 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
TPM3-221ENST00000513769 H7BZZ5 65 aa5.39□□□□□ -1.55
TPM3-221ENST00000513769 TMEM258P61165 79 aa5.39□□□□□ -1.55
TPM3-221ENST00000513769 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
TPM3-221ENST00000513769 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
TPM3-221ENST00000513769 Q5W150 140 aa5.38□□□□□ -1.55
TPM3-221ENST00000513769 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
TPM3-221ENST00000513769 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms