RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
NME1-210ENST00000512768 CXCL6P80162 114 aa9.91□□□□□ -0.82
NME1-210ENST00000512768 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
NME1-210ENST00000512768 HMCN2Q8NDA2 5059 aa9.91□□□□□ -0.82
NME1-210ENST00000512768 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
NME1-210ENST00000512768 KRTAP13-3Q3SY46 172 aa9.9□□□□□ -0.82
NME1-210ENST00000512768 K7EQZ3 153 aa9.89□□□□□ -0.83
NME1-210ENST00000512768 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
NME1-210ENST00000512768 PRR15Q8IV56 129 aa9.89□□□□□ -0.83
NME1-210ENST00000512768 Q8N9L7 120 aa9.89□□□□□ -0.83
NME1-210ENST00000512768 ATP5EP2Q5VTU8 51 aa9.88□□□□□ -0.83
NME1-210ENST00000512768 LINC00313P59037 77 aa9.86□□□□□ -0.83
NME1-210ENST00000512768 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
NME1-210ENST00000512768 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
NME1-210ENST00000512768 C8orf17Q9NRJ1 99 aa9.83□□□□□ -0.84
NME1-210ENST00000512768 LPAP08519 4548 aa9.81□□□□□ -0.84
NME1-210ENST00000512768 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
NME1-210ENST00000512768 XP32Q5T750 250 aa9.78□□□□□ -0.84
NME1-210ENST00000512768 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
NME1-210ENST00000512768 KRTAP16-1A8MUX0 517 aa9.76□□□□□ -0.85
NME1-210ENST00000512768 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
NME1-210ENST00000512768 hDV103S1A0JD37 113 aa9.73□□□□□ -0.85
NME1-210ENST00000512768 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
NME1-210ENST00000512768 MT-ATP8P03928 68 aa9.73□□□□□ -0.85
NME1-210ENST00000512768 LRP2P98164 4655 aa9.72□□□□□ -0.85
NME1-210ENST00000512768 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
NME1-210ENST00000512768 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.86
NME1-210ENST00000512768 A0A087WVE0 104 aa9.69□□□□□ -0.86
NME1-210ENST00000512768 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
NME1-210ENST00000512768 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
NME1-210ENST00000512768 A8MUU9 505 aa9.68□□□□□ -0.86
NME1-210ENST00000512768 Q75L30 129 aa9.67□□□□□ -0.86
NME1-210ENST00000512768 RPL37P61927 97 aaKnown RBP9.66□□□□□ -0.86
NME1-210ENST00000512768 IMUPQ9GZP8 106 aa9.65□□□□□ -0.86
NME1-210ENST00000512768 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
NME1-210ENST00000512768 NDUFS5O43920 106 aa9.62□□□□□ -0.87
NME1-210ENST00000512768 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
NME1-210ENST00000512768 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
NME1-210ENST00000512768 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
NME1-210ENST00000512768 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
NME1-210ENST00000512768 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.89
NME1-210ENST00000512768 FAM236AA0A1B0GUQ0 79 aa9.49□□□□□ -0.89
NME1-210ENST00000512768 FAM236BA0A1B0GV22 79 aa9.49□□□□□ -0.89
NME1-210ENST00000512768 SCGB1A1P11684 91 aa9.49□□□□□ -0.89
NME1-210ENST00000512768 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
NME1-210ENST00000512768 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.9
NME1-210ENST00000512768 Q5W150 140 aa9.45□□□□□ -0.9
NME1-210ENST00000512768 UQCRQO14949 82 aa9.42□□□□□ -0.9
NME1-210ENST00000512768 OCR1Q9BZK8 76 aa9.42□□□□□ -0.9
NME1-210ENST00000512768 RNF213Q63HN8 5207 aa9.41□□□□□ -0.9
NME1-210ENST00000512768 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
NME1-210ENST00000512768 TRAV22A0A0B4J277 110 aa9.36□□□□□ -0.91
NME1-210ENST00000512768 ATOX1O00244 68 aa9.36□□□□□ -0.91
NME1-210ENST00000512768 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
NME1-210ENST00000512768 H0Y9P7 68 aa9.34□□□□□ -0.91
NME1-210ENST00000512768 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
NME1-210ENST00000512768 SPINK7P58062 85 aa9.32□□□□□ -0.92
NME1-210ENST00000512768 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
NME1-210ENST00000512768 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
NME1-210ENST00000512768 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
NME1-210ENST00000512768 MP68P56378 58 aa9.28□□□□□ -0.92
NME1-210ENST00000512768 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
NME1-210ENST00000512768 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
NME1-210ENST00000512768 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
NME1-210ENST00000512768 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
NME1-210ENST00000512768 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
NME1-210ENST00000512768 MUC2Q02817 5179 aa9.22□□□□□ -0.93
NME1-210ENST00000512768 HRES1P13985 223 aa9.21□□□□□ -0.94
NME1-210ENST00000512768 H3BPC8 53 aa9.2□□□□□ -0.94
NME1-210ENST00000512768 CYP4F30PQ9H0H9 118 aa9.2□□□□□ -0.94
NME1-210ENST00000512768 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
NME1-210ENST00000512768 COX7CP15954 63 aa9.13□□□□□ -0.95
NME1-210ENST00000512768 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
NME1-210ENST00000512768 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
NME1-210ENST00000512768 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
NME1-210ENST00000512768 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
NME1-210ENST00000512768 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
NME1-210ENST00000512768 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
NME1-210ENST00000512768 C4orf26Q17RF5 130 aa9.08□□□□□ -0.96
NME1-210ENST00000512768 FAM236DA0A1B0GTK5 79 aa9.07□□□□□ -0.96
NME1-210ENST00000512768 FAM236CP0DP71 79 aa9.07□□□□□ -0.96
NME1-210ENST00000512768 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
NME1-210ENST00000512768 COX6B2Q6YFQ2 88 aa9.06□□□□□ -0.96
NME1-210ENST00000512768 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
NME1-210ENST00000512768 LCE2CQ5TA81 110 aa9□□□□□ -0.97
NME1-210ENST00000512768 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.97
NME1-210ENST00000512768 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
NME1-210ENST00000512768 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
NME1-210ENST00000512768 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
NME1-210ENST00000512768 CYSTM1Q9H1C7 97 aa8.91□□□□□ -0.98
NME1-210ENST00000512768 NDUFC1O43677 76 aa8.89□□□□□ -0.99
NME1-210ENST00000512768 A8MUN3 132 aa8.85□□□□□ -0.99
NME1-210ENST00000512768 MT1HP80294 61 aa8.85□□□□□ -0.99
NME1-210ENST00000512768 H7BZZ5 65 aa8.84□□□□□ -0.99
NME1-210ENST00000512768 SPANXA2-OT1Q8N9U9 137 aa8.84□□□□□ -0.99
NME1-210ENST00000512768 DMAC1Q96GE9 116 aa8.83□□□□□ -1
NME1-210ENST00000512768 S4R3F8 94 aa8.78□□□□□ -1
NME1-210ENST00000512768 M0R2T5 61 aa8.76□□□□□ -1.01
NME1-210ENST00000512768 PCP4P48539 62 aa8.75□□□□□ -1.01
NME1-210ENST00000512768 LCE2AQ5TA79 106 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms