RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 NDUFB1O75438 58 aa6.16□□□□□ -1.42
PFDN1-204ENST00000512707 XP32Q5T750 250 aa6.16□□□□□ -1.42
PFDN1-204ENST00000512707 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
PFDN1-204ENST00000512707 FP248Q71RG6 208 aaPredicted RBP6.16□□□□□ -1.42
PFDN1-204ENST00000512707 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
PFDN1-204ENST00000512707 DEFB116Q30KQ4 102 aa6.14□□□□□ -1.43
PFDN1-204ENST00000512707 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
PFDN1-204ENST00000512707 Q96NJ1 140 aa6.14□□□□□ -1.43
PFDN1-204ENST00000512707 CXCL6P80162 114 aa6.13□□□□□ -1.43
PFDN1-204ENST00000512707 PRR4Q16378 134 aa6.13□□□□□ -1.43
PFDN1-204ENST00000512707 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
PFDN1-204ENST00000512707 A8MWP4 228 aa6.11□□□□□ -1.43
PFDN1-204ENST00000512707 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
PFDN1-204ENST00000512707 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
PFDN1-204ENST00000512707 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
PFDN1-204ENST00000512707 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
PFDN1-204ENST00000512707 LRP2P98164 4655 aa6.08□□□□□ -1.44
PFDN1-204ENST00000512707 IGKV3D-7A0A0C4DH55 119 aa6.07□□□□□ -1.44
PFDN1-204ENST00000512707 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
PFDN1-204ENST00000512707 DSCR10P59022 87 aa6.07□□□□□ -1.44
PFDN1-204ENST00000512707 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
PFDN1-204ENST00000512707 K7EQZ3 153 aa6.06□□□□□ -1.44
PFDN1-204ENST00000512707 LINC00313P59037 77 aa6.05□□□□□ -1.44
PFDN1-204ENST00000512707 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
PFDN1-204ENST00000512707 Q8N9L7 120 aa6.04□□□□□ -1.44
PFDN1-204ENST00000512707 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
PFDN1-204ENST00000512707 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
PFDN1-204ENST00000512707 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
PFDN1-204ENST00000512707 C9orf92A6NGG3 77 aa6.01□□□□□ -1.45
PFDN1-204ENST00000512707 IMUPQ9GZP8 106 aa6.01□□□□□ -1.45
PFDN1-204ENST00000512707 HCG22E2RYF7 251 aa6□□□□□ -1.45
PFDN1-204ENST00000512707 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
PFDN1-204ENST00000512707 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
PFDN1-204ENST00000512707 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
PFDN1-204ENST00000512707 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
PFDN1-204ENST00000512707 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
PFDN1-204ENST00000512707 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
PFDN1-204ENST00000512707 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
PFDN1-204ENST00000512707 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
PFDN1-204ENST00000512707 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
PFDN1-204ENST00000512707 A0A087WVE0 104 aa5.94□□□□□ -1.46
PFDN1-204ENST00000512707 NDUFS5O43920 106 aa5.93□□□□□ -1.46
PFDN1-204ENST00000512707 SCGB1A1P11684 91 aa5.92□□□□□ -1.46
PFDN1-204ENST00000512707 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
PFDN1-204ENST00000512707 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
PFDN1-204ENST00000512707 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
PFDN1-204ENST00000512707 Q75L30 129 aa5.9□□□□□ -1.46
PFDN1-204ENST00000512707 C20orf166-AS1Q96NR2 134 aa5.9□□□□□ -1.46
PFDN1-204ENST00000512707 A8MUU9 505 aa5.89□□□□□ -1.47
PFDN1-204ENST00000512707 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
PFDN1-204ENST00000512707 TP53AIP1Q9HCN2 124 aa5.89□□□□□ -1.47
PFDN1-204ENST00000512707 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
PFDN1-204ENST00000512707 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
PFDN1-204ENST00000512707 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
PFDN1-204ENST00000512707 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
PFDN1-204ENST00000512707 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
PFDN1-204ENST00000512707 PCP4P48539 62 aa5.86□□□□□ -1.47
PFDN1-204ENST00000512707 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
PFDN1-204ENST00000512707 SMIM20Q8N5G0 67 aa5.85□□□□□ -1.47
PFDN1-204ENST00000512707 ATOX1O00244 68 aa5.84□□□□□ -1.47
PFDN1-204ENST00000512707 UQCRQO14949 82 aa5.83□□□□□ -1.48
PFDN1-204ENST00000512707 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
PFDN1-204ENST00000512707 LPAP08519 4548 aa5.81□□□□□ -1.48
PFDN1-204ENST00000512707 TRAV22A0A0B4J277 110 aa5.79□□□□□ -1.48
PFDN1-204ENST00000512707 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
PFDN1-204ENST00000512707 OCR1Q9BZK8 76 aa5.79□□□□□ -1.48
PFDN1-204ENST00000512707 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
PFDN1-204ENST00000512707 MP68P56378 58 aa5.78□□□□□ -1.48
PFDN1-204ENST00000512707 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
PFDN1-204ENST00000512707 H0Y9P7 68 aa5.75□□□□□ -1.49
PFDN1-204ENST00000512707 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
PFDN1-204ENST00000512707 Q5W150 140 aa5.74□□□□□ -1.49
PFDN1-204ENST00000512707 SERP2Q8N6R1 65 aa5.74□□□□□ -1.49
PFDN1-204ENST00000512707 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
PFDN1-204ENST00000512707 H3BPC8 53 aa5.72□□□□□ -1.49
PFDN1-204ENST00000512707 C7orf65Q6ZTY9 151 aa5.72□□□□□ -1.49
PFDN1-204ENST00000512707 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
PFDN1-204ENST00000512707 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
PFDN1-204ENST00000512707 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
PFDN1-204ENST00000512707 MUC2Q02817 5179 aa5.71□□□□□ -1.5
PFDN1-204ENST00000512707 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
PFDN1-204ENST00000512707 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
PFDN1-204ENST00000512707 A0A0U1RQV1 116 aa5.69□□□□□ -1.5
PFDN1-204ENST00000512707 SPINK7P58062 85 aa5.69□□□□□ -1.5
PFDN1-204ENST00000512707 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
PFDN1-204ENST00000512707 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
PFDN1-204ENST00000512707 COX7CP15954 63 aa5.67□□□□□ -1.5
PFDN1-204ENST00000512707 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.5
PFDN1-204ENST00000512707 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
PFDN1-204ENST00000512707 C20orf197Q8N268 126 aa5.64□□□□□ -1.51
PFDN1-204ENST00000512707 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
PFDN1-204ENST00000512707 CYP4F30PQ9H0H9 118 aa5.64□□□□□ -1.51
PFDN1-204ENST00000512707 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
PFDN1-204ENST00000512707 RBM12B-AS1Q9P1G2 102 aa5.62□□□□□ -1.51
PFDN1-204ENST00000512707 KLKP1Q107X0 134 aa5.59□□□□□ -1.51
PFDN1-204ENST00000512707 SNURFQ9Y675 71 aa5.59□□□□□ -1.51
PFDN1-204ENST00000512707 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
PFDN1-204ENST00000512707 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
PFDN1-204ENST00000512707 NDUFC1O43677 76 aa5.57□□□□□ -1.52
PFDN1-204ENST00000512707 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms