RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 VPS25Q9BRG1 176 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 USH2AO75445 5202 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 H3BQ85 93 aa6.36□□□□□ -1.39
VEGFA-216ENST00000512683 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
VEGFA-216ENST00000512683 TMEM256-PLSCR3K7ERE1 68 aa6.35□□□□□ -1.39
VEGFA-216ENST00000512683 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
VEGFA-216ENST00000512683 ATXN8Q156A1 80 aa6.34□□□□□ -1.39
VEGFA-216ENST00000512683 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
VEGFA-216ENST00000512683 IGKV4-1P06312 121 aa6.33□□□□□ -1.4
VEGFA-216ENST00000512683 LINC00313P59037 77 aa6.33□□□□□ -1.4
VEGFA-216ENST00000512683 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
VEGFA-216ENST00000512683 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
VEGFA-216ENST00000512683 CCKP06307 115 aa6.32□□□□□ -1.4
VEGFA-216ENST00000512683 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
VEGFA-216ENST00000512683 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
VEGFA-216ENST00000512683 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
VEGFA-216ENST00000512683 TRACP01848 142 aa6.31□□□□□ -1.4
VEGFA-216ENST00000512683 FAM236DA0A1B0GTK5 79 aa6.3□□□□□ -1.4
VEGFA-216ENST00000512683 FAM236CP0DP71 79 aa6.3□□□□□ -1.4
VEGFA-216ENST00000512683 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
VEGFA-216ENST00000512683 MT2AP02795 61 aa6.29□□□□□ -1.4
VEGFA-216ENST00000512683 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
VEGFA-216ENST00000512683 H3BT86 120 aa6.27□□□□□ -1.41
VEGFA-216ENST00000512683 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
VEGFA-216ENST00000512683 C9JAW5 83 aa6.26□□□□□ -1.41
VEGFA-216ENST00000512683 RBM3P98179 157 aaKnown RBP6.26□□□□□ -1.41
VEGFA-216ENST00000512683 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 PCP4P48539 62 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
VEGFA-216ENST00000512683 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
VEGFA-216ENST00000512683 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
VEGFA-216ENST00000512683 HRES1P13985 223 aa6.24□□□□□ -1.41
VEGFA-216ENST00000512683 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
VEGFA-216ENST00000512683 LCE2BO14633 110 aa6.23□□□□□ -1.41
VEGFA-216ENST00000512683 MT1FP04733 61 aa6.23□□□□□ -1.41
VEGFA-216ENST00000512683 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
VEGFA-216ENST00000512683 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
VEGFA-216ENST00000512683 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
VEGFA-216ENST00000512683 C8orf87E5RJ46 101 aa6.2□□□□□ -1.42
VEGFA-216ENST00000512683 Q6ZQT0 140 aa6.2□□□□□ -1.42
VEGFA-216ENST00000512683 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
VEGFA-216ENST00000512683 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
VEGFA-216ENST00000512683 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
VEGFA-216ENST00000512683 J3KT08 172 aa6.17□□□□□ -1.42
VEGFA-216ENST00000512683 ACYP1P07311 99 aa6.17□□□□□ -1.42
VEGFA-216ENST00000512683 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
VEGFA-216ENST00000512683 FAM240AA0A1B0GVK7 77 aa6.14□□□□□ -1.43
VEGFA-216ENST00000512683 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
VEGFA-216ENST00000512683 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
VEGFA-216ENST00000512683 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
VEGFA-216ENST00000512683 A0A1B0GW54 56 aa6.12□□□□□ -1.43
VEGFA-216ENST00000512683 SPINK7P58062 85 aa6.12□□□□□ -1.43
VEGFA-216ENST00000512683 A8MWP4 228 aa6.11□□□□□ -1.43
VEGFA-216ENST00000512683 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
VEGFA-216ENST00000512683 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
VEGFA-216ENST00000512683 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
VEGFA-216ENST00000512683 NDUFB1O75438 58 aa6.1□□□□□ -1.43
VEGFA-216ENST00000512683 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
VEGFA-216ENST00000512683 PDE6GP18545 87 aa6.09□□□□□ -1.43
VEGFA-216ENST00000512683 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
VEGFA-216ENST00000512683 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
VEGFA-216ENST00000512683 Q6ZVQ6 151 aa6.05□□□□□ -1.44
VEGFA-216ENST00000512683 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
VEGFA-216ENST00000512683 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
VEGFA-216ENST00000512683 NREPQ16612 68 aa6.03□□□□□ -1.44
VEGFA-216ENST00000512683 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
VEGFA-216ENST00000512683 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
VEGFA-216ENST00000512683 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
VEGFA-216ENST00000512683 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
VEGFA-216ENST00000512683 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
VEGFA-216ENST00000512683 K7EQZ3 153 aa5.98□□□□□ -1.45
VEGFA-216ENST00000512683 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
VEGFA-216ENST00000512683 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
VEGFA-216ENST00000512683 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
VEGFA-216ENST00000512683 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
VEGFA-216ENST00000512683 Q5W150 140 aa5.92□□□□□ -1.46
VEGFA-216ENST00000512683 UBL5Q9BZL1 73 aa5.92□□□□□ -1.46
VEGFA-216ENST00000512683 BPY2O14599 106 aa5.91□□□□□ -1.46
VEGFA-216ENST00000512683 NDUFS5O43920 106 aa5.9□□□□□ -1.46
VEGFA-216ENST00000512683 Q8N9L7 120 aa5.89□□□□□ -1.47
VEGFA-216ENST00000512683 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
VEGFA-216ENST00000512683 ATOX1O00244 68 aa5.86□□□□□ -1.47
VEGFA-216ENST00000512683 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
VEGFA-216ENST00000512683 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
VEGFA-216ENST00000512683 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
VEGFA-216ENST00000512683 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
VEGFA-216ENST00000512683 NEBP20929 6669 aa5.85□□□□□ -1.47
VEGFA-216ENST00000512683 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
VEGFA-216ENST00000512683 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
VEGFA-216ENST00000512683 UQCRQO14949 82 aa5.82□□□□□ -1.48
VEGFA-216ENST00000512683 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
VEGFA-216ENST00000512683 CXCL6P80162 114 aa5.82□□□□□ -1.48
VEGFA-216ENST00000512683 SMIM20Q8N5G0 67 aa5.8□□□□□ -1.48
VEGFA-216ENST00000512683 COX7CP15954 63 aa5.79□□□□□ -1.48
VEGFA-216ENST00000512683 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
VEGFA-216ENST00000512683 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
VEGFA-216ENST00000512683 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms