RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
SCLT1-209ENST00000511426 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
SCLT1-209ENST00000511426 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
SCLT1-209ENST00000511426 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
SCLT1-209ENST00000511426 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.02
SCLT1-209ENST00000511426 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 hDV103S1A0JD37 113 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 UQCRQO14949 82 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 OXTP01178 125 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 COX7CP15954 63 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
SCLT1-209ENST00000511426 OCR1Q9BZK8 76 aa8.62□□□□□ -1.03
SCLT1-209ENST00000511426 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
SCLT1-209ENST00000511426 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
SCLT1-209ENST00000511426 LINC00313P59037 77 aa8.58□□□□□ -1.04
SCLT1-209ENST00000511426 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
SCLT1-209ENST00000511426 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
SCLT1-209ENST00000511426 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
SCLT1-209ENST00000511426 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
SCLT1-209ENST00000511426 C5orf47Q569G3 176 aa8.53□□□□□ -1.04
SCLT1-209ENST00000511426 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
SCLT1-209ENST00000511426 CCDC179H3BU77 68 aa8.5□□□□□ -1.05
SCLT1-209ENST00000511426 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
SCLT1-209ENST00000511426 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
SCLT1-209ENST00000511426 H3BPC8 53 aa8.48□□□□□ -1.05
SCLT1-209ENST00000511426 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.05
SCLT1-209ENST00000511426 MP68P56378 58 aa8.46□□□□□ -1.05
SCLT1-209ENST00000511426 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
SCLT1-209ENST00000511426 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.06
SCLT1-209ENST00000511426 NDUFS5O43920 106 aa8.46□□□□□ -1.06
SCLT1-209ENST00000511426 C20orf197Q8N268 126 aa8.46□□□□□ -1.06
SCLT1-209ENST00000511426 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
SCLT1-209ENST00000511426 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
SCLT1-209ENST00000511426 TNXBP22105 4242 aa8.44□□□□□ -1.06
SCLT1-209ENST00000511426 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
SCLT1-209ENST00000511426 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
SCLT1-209ENST00000511426 NDUFC1O43677 76 aa8.43□□□□□ -1.06
SCLT1-209ENST00000511426 A0A0U1RQV1 116 aa8.42□□□□□ -1.06
SCLT1-209ENST00000511426 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
SCLT1-209ENST00000511426 H0Y9P7 68 aa8.4□□□□□ -1.06
SCLT1-209ENST00000511426 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
SCLT1-209ENST00000511426 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
SCLT1-209ENST00000511426 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
SCLT1-209ENST00000511426 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
SCLT1-209ENST00000511426 A8MUU9 505 aa8.34□□□□□ -1.07
SCLT1-209ENST00000511426 HERC2O95714 4834 aa8.34□□□□□ -1.07
SCLT1-209ENST00000511426 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.08
SCLT1-209ENST00000511426 LINC00208Q96KT6 92 aa8.34□□□□□ -1.08
SCLT1-209ENST00000511426 J3QL48 77 aa8.33□□□□□ -1.08
SCLT1-209ENST00000511426 TMEM258P61165 79 aa8.33□□□□□ -1.08
SCLT1-209ENST00000511426 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
SCLT1-209ENST00000511426 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
SCLT1-209ENST00000511426 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
SCLT1-209ENST00000511426 H7BZZ5 65 aa8.32□□□□□ -1.08
SCLT1-209ENST00000511426 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
SCLT1-209ENST00000511426 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
SCLT1-209ENST00000511426 Q75L30 129 aa8.3□□□□□ -1.08
SCLT1-209ENST00000511426 CYSTM1Q9H1C7 97 aa8.3□□□□□ -1.08
SCLT1-209ENST00000511426 Q5W150 140 aa8.29□□□□□ -1.08
SCLT1-209ENST00000511426 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-209ENST00000511426 TPRXLQ17RH7 258 aa8.27□□□□□ -1.08
SCLT1-209ENST00000511426 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
SCLT1-209ENST00000511426 PRR4Q16378 134 aa8.26□□□□□ -1.09
SCLT1-209ENST00000511426 SPANXA2-OT1Q8N9U9 137 aa8.22□□□□□ -1.09
SCLT1-209ENST00000511426 IGKV2-30P06310 120 aa8.21□□□□□ -1.09
SCLT1-209ENST00000511426 FAM236DA0A1B0GTK5 79 aa8.2□□□□□ -1.1
SCLT1-209ENST00000511426 FAM236CP0DP71 79 aa8.2□□□□□ -1.1
SCLT1-209ENST00000511426 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
SCLT1-209ENST00000511426 XP32Q5T750 250 aa8.2□□□□□ -1.1
SCLT1-209ENST00000511426 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
SCLT1-209ENST00000511426 ABCA13Q86UQ4 5058 aa8.18□□□□□ -1.1
SCLT1-209ENST00000511426 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
SCLT1-209ENST00000511426 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
SCLT1-209ENST00000511426 PCOTHQ58A44 107 aa8.11□□□□□ -1.11
SCLT1-209ENST00000511426 IGKV2D-30A0A075B6S6 120 aa8.11□□□□□ -1.11
SCLT1-209ENST00000511426 RPS28P62857 69 aaKnown RBP8.07□□□□□ -1.12
SCLT1-209ENST00000511426 HRES1P13985 223 aa8.05□□□□□ -1.12
SCLT1-209ENST00000511426 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
SCLT1-209ENST00000511426 SPINK7P58062 85 aa8.04□□□□□ -1.12
SCLT1-209ENST00000511426 A8MUN3 132 aa7.98□□□□□ -1.13
SCLT1-209ENST00000511426 LCE2BO14633 110 aa7.98□□□□□ -1.13
SCLT1-209ENST00000511426 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
SCLT1-209ENST00000511426 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
SCLT1-209ENST00000511426 ACYP2P14621 99 aa7.95□□□□□ -1.14
SCLT1-209ENST00000511426 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
SCLT1-209ENST00000511426 C4orf26Q17RF5 130 aa7.88□□□□□ -1.15
SCLT1-209ENST00000511426 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
SCLT1-209ENST00000511426 COA5Q86WW8 74 aa7.88□□□□□ -1.15
SCLT1-209ENST00000511426 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
SCLT1-209ENST00000511426 LRP2P98164 4655 aa7.82□□□□□ -1.16
SCLT1-209ENST00000511426 LPAP08519 4548 aa7.82□□□□□ -1.16
SCLT1-209ENST00000511426 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
SCLT1-209ENST00000511426 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
SCLT1-209ENST00000511426 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
SCLT1-209ENST00000511426 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
SCLT1-209ENST00000511426 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
SCLT1-209ENST00000511426 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
SCLT1-209ENST00000511426 V9GYY9 64 aa7.74□□□□□ -1.17
SCLT1-209ENST00000511426 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms