RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 PDE6GP18545 87 aa7.57□□□□□ -1.2
PRDM16-205ENST00000509860 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
PRDM16-205ENST00000509860 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
PRDM16-205ENST00000509860 OCR1Q9BZK8 76 aa7.56□□□□□ -1.2
PRDM16-205ENST00000509860 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
PRDM16-205ENST00000509860 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
PRDM16-205ENST00000509860 A0A087WSZ3 146 aa7.54□□□□□ -1.2
PRDM16-205ENST00000509860 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
PRDM16-205ENST00000509860 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
PRDM16-205ENST00000509860 LCE6AA0A183 80 aa7.53□□□□□ -1.2
PRDM16-205ENST00000509860 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
PRDM16-205ENST00000509860 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
PRDM16-205ENST00000509860 FAT1Q14517 4588 aa7.52□□□□□ -1.21
PRDM16-205ENST00000509860 LINC00483Q53H64 154 aa7.52□□□□□ -1.21
PRDM16-205ENST00000509860 Q8NBF4 154 aa7.52□□□□□ -1.21
PRDM16-205ENST00000509860 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
PRDM16-205ENST00000509860 LINC00313P59037 77 aa7.51□□□□□ -1.21
PRDM16-205ENST00000509860 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
PRDM16-205ENST00000509860 MOBPQ13875 183 aa7.5□□□□□ -1.21
PRDM16-205ENST00000509860 ANAPC11Q9NYG5 84 aa7.5□□□□□ -1.21
PRDM16-205ENST00000509860 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
PRDM16-205ENST00000509860 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
PRDM16-205ENST00000509860 ZNF861PO60384 105 aa7.48□□□□□ -1.21
PRDM16-205ENST00000509860 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
PRDM16-205ENST00000509860 Q8N9P0 234 aaPredicted RBP7.48□□□□□ -1.21
PRDM16-205ENST00000509860 K7EQZ3 153 aa7.47□□□□□ -1.21
PRDM16-205ENST00000509860 IGLV7-43P04211 117 aa7.47□□□□□ -1.21
PRDM16-205ENST00000509860 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
PRDM16-205ENST00000509860 HSPG2P98160 4391 aa7.45□□□□□ -1.22
PRDM16-205ENST00000509860 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
PRDM16-205ENST00000509860 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
PRDM16-205ENST00000509860 A0A1B0GW54 56 aa7.42□□□□□ -1.22
PRDM16-205ENST00000509860 MP68P56378 58 aa7.41□□□□□ -1.22
PRDM16-205ENST00000509860 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
PRDM16-205ENST00000509860 DSCR10P59022 87 aa7.41□□□□□ -1.22
PRDM16-205ENST00000509860 PCOTHQ58A44 107 aa7.4□□□□□ -1.22
PRDM16-205ENST00000509860 CDK2AP2O75956 126 aa7.39□□□□□ -1.23
PRDM16-205ENST00000509860 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
PRDM16-205ENST00000509860 Q75L30 129 aa7.37□□□□□ -1.23
PRDM16-205ENST00000509860 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
PRDM16-205ENST00000509860 Q96NJ1 140 aa7.37□□□□□ -1.23
PRDM16-205ENST00000509860 KRTAP1-4P0C5Y4 121 aa7.36□□□□□ -1.23
PRDM16-205ENST00000509860 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
PRDM16-205ENST00000509860 SPAG11AQ6PDA7 123 aa7.36□□□□□ -1.23
PRDM16-205ENST00000509860 A0A087X002 238 aa7.35□□□□□ -1.23
PRDM16-205ENST00000509860 LINC00472Q9H8W2 130 aa7.35□□□□□ -1.23
PRDM16-205ENST00000509860 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
PRDM16-205ENST00000509860 SPINK7P58062 85 aa7.35□□□□□ -1.23
PRDM16-205ENST00000509860 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
PRDM16-205ENST00000509860 RYR1P21817 5038 aa7.34□□□□□ -1.23
PRDM16-205ENST00000509860 CASC2Q6XLA1 102 aa7.33□□□□□ -1.24
PRDM16-205ENST00000509860 ZCCHC13Q8WW36 166 aaKnown RBP7.33□□□□□ -1.24
PRDM16-205ENST00000509860 TNXBP22105 4242 aa7.32□□□□□ -1.24
PRDM16-205ENST00000509860 IGHV6-1A0A0B4J1U7 121 aa7.32□□□□□ -1.24
PRDM16-205ENST00000509860 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
PRDM16-205ENST00000509860 NDUFB1O75438 58 aa7.28□□□□□ -1.24
PRDM16-205ENST00000509860 KRTAP17-1Q9BYP8 105 aa7.28□□□□□ -1.24
PRDM16-205ENST00000509860 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.25
PRDM16-205ENST00000509860 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
PRDM16-205ENST00000509860 COA5Q86WW8 74 aa7.26□□□□□ -1.25
PRDM16-205ENST00000509860 H0Y9P7 68 aa7.24□□□□□ -1.25
PRDM16-205ENST00000509860 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
PRDM16-205ENST00000509860 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
PRDM16-205ENST00000509860 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
PRDM16-205ENST00000509860 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
PRDM16-205ENST00000509860 A8MWP4 228 aa7.21□□□□□ -1.25
PRDM16-205ENST00000509860 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
PRDM16-205ENST00000509860 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
PRDM16-205ENST00000509860 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
PRDM16-205ENST00000509860 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
PRDM16-205ENST00000509860 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
PRDM16-205ENST00000509860 PLA2G1BP04054 148 aaKnown RBP7.16□□□□□ -1.26
PRDM16-205ENST00000509860 MYCBP2O75592 4640 aa7.15□□□□□ -1.27
PRDM16-205ENST00000509860 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
PRDM16-205ENST00000509860 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
PRDM16-205ENST00000509860 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
PRDM16-205ENST00000509860 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
PRDM16-205ENST00000509860 TYMSOSQ8TAI1 123 aa7.08□□□□□ -1.28
PRDM16-205ENST00000509860 SPINK1P00995 79 aa7.07□□□□□ -1.28
PRDM16-205ENST00000509860 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
PRDM16-205ENST00000509860 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
PRDM16-205ENST00000509860 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
PRDM16-205ENST00000509860 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
PRDM16-205ENST00000509860 ROMO1P60602 79 aa7.01□□□□□ -1.29
PRDM16-205ENST00000509860 Q5VSD8 79 aa7.01□□□□□ -1.29
PRDM16-205ENST00000509860 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
PRDM16-205ENST00000509860 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
PRDM16-205ENST00000509860 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
PRDM16-205ENST00000509860 RPS29P62273 56 aaKnown RBP6.98□□□□□ -1.29
PRDM16-205ENST00000509860 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
PRDM16-205ENST00000509860 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
PRDM16-205ENST00000509860 IGLV7-46A0A075B6I9 117 aa6.97□□□□□ -1.29
PRDM16-205ENST00000509860 Q5W150 140 aa6.96□□□□□ -1.3
PRDM16-205ENST00000509860 HRES1P13985 223 aa6.96□□□□□ -1.3
PRDM16-205ENST00000509860 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
PRDM16-205ENST00000509860 Q8N1X5 172 aa6.94□□□□□ -1.3
PRDM16-205ENST00000509860 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
PRDM16-205ENST00000509860 H3BPC8 53 aa6.9□□□□□ -1.31
PRDM16-205ENST00000509860 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.31
PRDM16-205ENST00000509860 HERC2O95714 4834 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms