RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CLPSL2Q6UWE3 100 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 NBASA2RRP1 2371 aa2.34□□□□□ -2.03
NIPBL-206ENST00000509429 Q6ZRN7 208 aaPredicted RBP2.33□□□□□ -2.04
NIPBL-206ENST00000509429 WFDC13Q8IUB5 93 aa2.33□□□□□ -2.04
NIPBL-206ENST00000509429 C6orf48Q9UBA6 75 aa2.33□□□□□ -2.04
NIPBL-206ENST00000509429 PKD1L2Q7Z442 2459 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 MYO9AB2RTY4 2548 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 H3BNG1 76 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 SPART-AS1P0CW21 52 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 AKAP9Q99996 3911 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 FN1P02751 2386 aaKnown RBP2.32□□□□□ -2.04
NIPBL-206ENST00000509429 RELNP78509 3460 aa2.32□□□□□ -2.04
NIPBL-206ENST00000509429 ASH1LQ9NR48 2969 aaKnown RBP2.32□□□□□ -2.04
NIPBL-206ENST00000509429 VPS13CQ709C8 3753 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 UBR5O95071 2799 aaPredicted RBP2.31□□□□□ -2.04
NIPBL-206ENST00000509429 UNQ6190/PRO20217Q6UXQ8 127 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 COX6B2Q6YFQ2 88 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 CSPG4Q6UVK1 2322 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 CACNA1AO00555 2505 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 SVEP1Q4LDE5 3571 aa2.31□□□□□ -2.04
NIPBL-206ENST00000509429 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
NIPBL-206ENST00000509429 A0A096LPF7 62 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 DEFB135Q30KP9 77 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 IGFL1Q6UW32 110 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 WFDC10BQ8IUB3 73 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 SETXQ7Z333 2677 aaKnown RBP2.3□□□□□ -2.04
NIPBL-206ENST00000509429 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
NIPBL-206ENST00000509429 MAP1AP78559 2803 aaPredicted RBP2.29□□□□□ -2.04
NIPBL-206ENST00000509429 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
NIPBL-206ENST00000509429 CHD8Q9HCK8 2581 aa2.29□□□□□ -2.04
NIPBL-206ENST00000509429 NCOR2Q9Y618 2525 aa2.29□□□□□ -2.04
NIPBL-206ENST00000509429 H0YAA0 97 aa2.29□□□□□ -2.04
NIPBL-206ENST00000509429 MRPL34Q9BQ48 92 aaKnown RBP2.29□□□□□ -2.04
NIPBL-206ENST00000509429 TLN2Q9Y4G6 2542 aa2.29□□□□□ -2.04
NIPBL-206ENST00000509429 CRYBG3Q68DQ2 2970 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 CELSR2Q9HCU4 2923 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 LINC01556Q5JQF7 62 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 Q6ZSA8 131 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 MXRA5Q9NR99 2828 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 FLNCQ14315 2725 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 IGSF10Q6WRI0 2623 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 ACACBO00763 2458 aa2.28□□□□□ -2.04
NIPBL-206ENST00000509429 CHD6Q8TD26 2715 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 USP9YO00507 2555 aaPredicted RBP2.27□□□□□ -2.05
NIPBL-206ENST00000509429 COL12A1Q99715 3063 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 SPG11Q96JI7 2443 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 HTN3P15516 51 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 ITPR3Q14573 2671 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 SPTBN4Q9H254 2564 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 LRRK2Q5S007 2527 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 FBN2P35556 2912 aa2.27□□□□□ -2.05
NIPBL-206ENST00000509429 EPG5Q9HCE0 2579 aa2.26□□□□□ -2.05
NIPBL-206ENST00000509429 ZANQ9Y493 2812 aa2.26□□□□□ -2.05
NIPBL-206ENST00000509429 WNK1Q9H4A3 2382 aa2.26□□□□□ -2.05
NIPBL-206ENST00000509429 SPRR1AP35321 89 aa2.26□□□□□ -2.05
NIPBL-206ENST00000509429 JMJD1CQ15652 2540 aa2.26□□□□□ -2.05
NIPBL-206ENST00000509429 UTP20O75691 2785 aaKnown RBP2.25□□□□□ -2.05
NIPBL-206ENST00000509429 DEFB4AO15263 64 aa2.25□□□□□ -2.05
NIPBL-206ENST00000509429 FLNAP21333 2647 aaKnown RBP2.25□□□□□ -2.05
NIPBL-206ENST00000509429 PIEZO1Q92508 2521 aa2.25□□□□□ -2.05
NIPBL-206ENST00000509429 PTPN13Q12923 2485 aa2.25□□□□□ -2.05
NIPBL-206ENST00000509429 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
NIPBL-206ENST00000509429 C2CD3Q4AC94 2353 aa2.24□□□□□ -2.05
NIPBL-206ENST00000509429 ZNF462Q96JM2 2506 aa2.24□□□□□ -2.05
NIPBL-206ENST00000509429 FAM208BQ5VWN6 2430 aa2.24□□□□□ -2.05
NIPBL-206ENST00000509429 POLQO75417 2590 aa2.24□□□□□ -2.05
NIPBL-206ENST00000509429 GCN1Q92616 2671 aaKnown RBP2.24□□□□□ -2.05
NIPBL-206ENST00000509429 MMP24-AS1A0A0U1RRL7 71 aa2.23□□□□□ -2.05
NIPBL-206ENST00000509429 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
NIPBL-206ENST00000509429 DEFB105AQ8NG35 78 aa2.23□□□□□ -2.05
NIPBL-206ENST00000509429 USP24Q9UPU5 2620 aa2.23□□□□□ -2.05
NIPBL-206ENST00000509429 TEX15Q9BXT5 2789 aa2.23□□□□□ -2.05
NIPBL-206ENST00000509429 ABCA12Q86UK0 2595 aa2.23□□□□□ -2.05
NIPBL-206ENST00000509429 FLG2Q5D862 2391 aaPredicted RBP2.23□□□□□ -2.05
NIPBL-206ENST00000509429 NBPF19A0A087WUL8 3843 aa2.22□□□□□ -2.05
NIPBL-206ENST00000509429 CENPEQ02224 2701 aa2.22□□□□□ -2.05
NIPBL-206ENST00000509429 UBE2DNLQ8IWF7 75 aa2.22□□□□□ -2.05
NIPBL-206ENST00000509429 APCP25054 2843 aa2.22□□□□□ -2.05
NIPBL-206ENST00000509429 CSMD2Q7Z408 3487 aa2.21□□□□□ -2.06
NIPBL-206ENST00000509429 H1FX-AS1Q4G0G2 97 aa2.21□□□□□ -2.06
NIPBL-206ENST00000509429 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
NIPBL-206ENST00000509429 J3QKU1 62 aa2.2□□□□□ -2.06
NIPBL-206ENST00000509429 SPRR1BP22528 89 aa2.2□□□□□ -2.06
NIPBL-206ENST00000509429 KRTAP13-2Q52LG2 175 aa2.2□□□□□ -2.06
NIPBL-206ENST00000509429 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
NIPBL-206ENST00000509429 SONP18583 2426 aaKnown RBP2.2□□□□□ -2.06
NIPBL-206ENST00000509429 DNAH1Q9P2D7 4330 aa2.19□□□□□ -2.06
NIPBL-206ENST00000509429 HIVEP2P31629 2446 aa2.18□□□□□ -2.06
NIPBL-206ENST00000509429 CCDC168Q8NDH2 2452 aa2.18□□□□□ -2.06
NIPBL-206ENST00000509429 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.06
NIPBL-206ENST00000509429 ZNF469Q96JG9 3925 aaPredicted RBP2.17□□□□□ -2.06
NIPBL-206ENST00000509429 NF1P21359 2839 aa2.17□□□□□ -2.06
NIPBL-206ENST00000509429 HIVEP1P15822 2718 aa2.17□□□□□ -2.06
NIPBL-206ENST00000509429 MTORP42345 2549 aa2.17□□□□□ -2.06
NIPBL-206ENST00000509429 SETD2Q9BYW2 2564 aaPredicted RBP2.16□□□□□ -2.06
NIPBL-206ENST00000509429 PDZD2O15018 2839 aa2.16□□□□□ -2.06
NIPBL-206ENST00000509429 UNC79Q9P2D8 2635 aa2.16□□□□□ -2.06
NIPBL-206ENST00000509429 ZFYVE26Q68DK2 2539 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms