RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SPATA8Q6RVD6 105 aa1.4□□□□□ -2.19
UBE2D3-225ENST00000508476 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
UBE2D3-225ENST00000508476 RYR2Q92736 4967 aa1.4□□□□□ -2.19
UBE2D3-225ENST00000508476 TRRAPQ9Y4A5 3859 aa1.4□□□□□ -2.19
UBE2D3-225ENST00000508476 H3BRN7 92 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 FXYD3Q14802 87 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 DEFB114Q30KQ6 69 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 ANK2Q01484 3957 aa1.39□□□□□ -2.19
UBE2D3-225ENST00000508476 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 HERC2O95714 4834 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 LOC110117498A0A087WWA1 95 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 H0YGX0 51 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 NCR3O14931 201 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 INE1O15225 51 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 MRPL33O75394 65 aaKnown RBP1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 ACYP2P14621 99 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 C5orf56Q8N8D9 126 aa1.38□□□□□ -2.19
UBE2D3-225ENST00000508476 TRGV2A0A075B6R0 118 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 TRGV1A0A0A0MS02 117 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 NBDYA0A0U1RRE5 68 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 A0A1B0GU69 56 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 LINC01546A6NGU7 62 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 M0R1W7 72 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 NDUFA4O00483 81 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 FXYD6P3P58550 94 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 FXYD4P59646 89 aa1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 TIMM8BQ9Y5J9 83 aaPredicted RBP1.37□□□□□ -2.19
UBE2D3-225ENST00000508476 KIAA1109Q2LD37 5005 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 I3L3M4 83 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 M0R2N4 97 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 ARL14EPLP0DKL9 152 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 SPINK7P58062 85 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 Q6ZQY7 126 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 TMEM167BQ9NRX6 74 aa1.36□□□□□ -2.19
UBE2D3-225ENST00000508476 SRRM2Q9UQ35 2752 aaKnown RBP1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 A0A096LNT2 108 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 DEFB108AA8MXU0 73 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 SPINK4O60575 86 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 COX7BP24311 80 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 HAMPP81172 84 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 COA5Q86WW8 74 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 ZNF625Q96I27 306 aaPredicted RBP1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 ARHGAP32A7KAX9 2087 aa1.35□□□□□ -2.19
UBE2D3-225ENST00000508476 A0A087WTM6 91 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 IGIPA6NJ69 53 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 K7EIL1 84 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 SMIM11BQ8TCY0 68 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 SPACA4Q8TDM5 124 aa1.34□□□□□ -2.19
UBE2D3-225ENST00000508476 HRNRQ86YZ3 2850 aaPredicted RBP1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 NDUFA3O95167 84 aa1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 Q96NJ1 140 aa1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 KCNQ1DNQ9H478 68 aa1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 LINC00472Q9H8W2 130 aa1.33□□□□□ -2.2
UBE2D3-225ENST00000508476 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
UBE2D3-225ENST00000508476 DNAH1Q9P2D7 4330 aa1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 CPSF4LA6NMK7 179 aaKnown RBP1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 LY6G6CO95867 125 aa1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 SPINK13Q1W4C9 94 aa1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 Q6ZRX8 168 aa1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 HERC1Q15751 4861 aa1.31□□□□□ -2.2
UBE2D3-225ENST00000508476 ABCA13Q86UQ4 5058 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 LINC00959A0A1B0GUT2 108 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 PCOTHQ58A44 107 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 SSBP3-AS1Q7Z2R9 100 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 DYNC2H1Q8NCM8 4307 aaKnown RBP1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
UBE2D3-225ENST00000508476 SACSQ9NZJ4 4579 aa1.29□□□□□ -2.2
UBE2D3-225ENST00000508476 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
UBE2D3-225ENST00000508476 LINC00575Q6W349 94 aa1.28□□□□□ -2.2
UBE2D3-225ENST00000508476 SMIM2Q9BVW6 85 aa1.28□□□□□ -2.2
UBE2D3-225ENST00000508476 TNCP24821 2201 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 GVQW2A0A096LPI5 108 aaPredicted RBP1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 DEFB110Q30KQ9 67 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 UBE2DNLQ8IWF7 75 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 COX14Q96I36 57 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 USMG5Q96IX5 58 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 CRIPTQ9P021 101 aa1.27□□□□□ -2.21
UBE2D3-225ENST00000508476 CMYA5Q8N3K9 4069 aa1.26□□□□□ -2.21
UBE2D3-225ENST00000508476 LINC00158P58513 81 aa1.26□□□□□ -2.21
UBE2D3-225ENST00000508476 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
UBE2D3-225ENST00000508476 COX6B2Q6YFQ2 88 aa1.25□□□□□ -2.21
UBE2D3-225ENST00000508476 LINC00308Q8TCZ7 52 aa1.25□□□□□ -2.21
UBE2D3-225ENST00000508476 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 G3V318 75 aa1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 CCL22O00626 93 aa1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 Q6ZRN7 208 aaPredicted RBP1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 Q8IZM0 81 aa1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 TP53AIP1Q9HCN2 124 aa1.24□□□□□ -2.21
UBE2D3-225ENST00000508476 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 NDUFA1O15239 70 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 CRIP1P50238 77 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms