RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
SFXN1-208ENST00000507823 MP68P56378 58 aa10.26□□□□□ -0.77
SFXN1-208ENST00000507823 IGHV6-1A0A0B4J1U7 121 aa10.24□□□□□ -0.77
SFXN1-208ENST00000507823 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
SFXN1-208ENST00000507823 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
SFXN1-208ENST00000507823 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
SFXN1-208ENST00000507823 H0Y9P7 68 aa10.21□□□□□ -0.77
SFXN1-208ENST00000507823 MRPL34Q9BQ48 92 aaKnown RBP10.2□□□□□ -0.78
SFXN1-208ENST00000507823 NOTCH2NLQ7Z3S9 236 aa10.2□□□□□ -0.78
SFXN1-208ENST00000507823 TRAV22A0A0B4J277 110 aa10.19□□□□□ -0.78
SFXN1-208ENST00000507823 LINC00208Q96KT6 92 aa10.18□□□□□ -0.78
SFXN1-208ENST00000507823 C8orf87E5RJ46 101 aa10.17□□□□□ -0.78
SFXN1-208ENST00000507823 PLA2G1BP04054 148 aaKnown RBP10.17□□□□□ -0.78
SFXN1-208ENST00000507823 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
SFXN1-208ENST00000507823 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
SFXN1-208ENST00000507823 KRTAP10-4P60372 401 aaPredicted RBP10.14□□□□□ -0.79
SFXN1-208ENST00000507823 KMT2CQ8NEZ4 4911 aaKnown RBP10.13□□□□□ -0.79
SFXN1-208ENST00000507823 C1orf64Q8NEQ6 169 aa10.12□□□□□ -0.79
SFXN1-208ENST00000507823 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
SFXN1-208ENST00000507823 TYMSOSQ8TAI1 123 aa10.11□□□□□ -0.79
SFXN1-208ENST00000507823 SPANXA2-OT1Q8N9U9 137 aa10.1□□□□□ -0.79
SFXN1-208ENST00000507823 SPINK1P00995 79 aa10.09□□□□□ -0.79
SFXN1-208ENST00000507823 FAT1Q14517 4588 aa10.08□□□□□ -0.8
SFXN1-208ENST00000507823 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
SFXN1-208ENST00000507823 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
SFXN1-208ENST00000507823 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
SFXN1-208ENST00000507823 KRTAP13-3Q3SY46 172 aa10.06□□□□□ -0.8
SFXN1-208ENST00000507823 NDUFS5O43920 106 aa10.05□□□□□ -0.8
SFXN1-208ENST00000507823 SMIM26A0A096LP01 95 aa10.05□□□□□ -0.8
SFXN1-208ENST00000507823 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
SFXN1-208ENST00000507823 LINC00313P59037 77 aa10.04□□□□□ -0.8
SFXN1-208ENST00000507823 Q8N9P0 234 aaPredicted RBP10.03□□□□□ -0.8
SFXN1-208ENST00000507823 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
SFXN1-208ENST00000507823 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
SFXN1-208ENST00000507823 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
SFXN1-208ENST00000507823 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
SFXN1-208ENST00000507823 FP248Q71RG6 208 aaPredicted RBP9.99□□□□□ -0.81
SFXN1-208ENST00000507823 Q5W150 140 aa9.98□□□□□ -0.81
SFXN1-208ENST00000507823 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
SFXN1-208ENST00000507823 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
SFXN1-208ENST00000507823 PRR4Q16378 134 aa9.93□□□□□ -0.82
SFXN1-208ENST00000507823 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
SFXN1-208ENST00000507823 C4orf26Q17RF5 130 aa9.89□□□□□ -0.83
SFXN1-208ENST00000507823 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
SFXN1-208ENST00000507823 RYR3Q15413 4870 aa9.88□□□□□ -0.83
SFXN1-208ENST00000507823 HSPG2P98160 4391 aa9.86□□□□□ -0.83
SFXN1-208ENST00000507823 RYR1P21817 5038 aa9.81□□□□□ -0.84
SFXN1-208ENST00000507823 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
SFXN1-208ENST00000507823 Q1T7F1 81 aa9.8□□□□□ -0.84
SFXN1-208ENST00000507823 COA5Q86WW8 74 aa9.76□□□□□ -0.85
SFXN1-208ENST00000507823 TNXBP22105 4242 aa9.76□□□□□ -0.85
SFXN1-208ENST00000507823 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
SFXN1-208ENST00000507823 Q5VSD8 79 aa9.73□□□□□ -0.85
SFXN1-208ENST00000507823 KRTAP10-8P60410 259 aa9.72□□□□□ -0.85
SFXN1-208ENST00000507823 RETNLBQ9BQ08 111 aa9.71□□□□□ -0.85
SFXN1-208ENST00000507823 HRES1P13985 223 aa9.71□□□□□ -0.86
SFXN1-208ENST00000507823 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
SFXN1-208ENST00000507823 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
SFXN1-208ENST00000507823 A8MUU9 505 aa9.69□□□□□ -0.86
SFXN1-208ENST00000507823 V9GYY9 64 aa9.69□□□□□ -0.86
SFXN1-208ENST00000507823 FAT3Q8TDW7 4589 aa9.68□□□□□ -0.86
SFXN1-208ENST00000507823 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
SFXN1-208ENST00000507823 Q8N1X5 172 aa9.67□□□□□ -0.86
SFXN1-208ENST00000507823 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
SFXN1-208ENST00000507823 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
SFXN1-208ENST00000507823 ACYP2P14621 99 aa9.62□□□□□ -0.87
SFXN1-208ENST00000507823 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
SFXN1-208ENST00000507823 IGKV2D-30A0A075B6S6 120 aa9.6□□□□□ -0.87
SFXN1-208ENST00000507823 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
SFXN1-208ENST00000507823 KIAA1109Q2LD37 5005 aa9.58□□□□□ -0.88
SFXN1-208ENST00000507823 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
SFXN1-208ENST00000507823 Q75L30 129 aa9.53□□□□□ -0.88
SFXN1-208ENST00000507823 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.88
SFXN1-208ENST00000507823 A8MUN3 132 aa9.52□□□□□ -0.89
SFXN1-208ENST00000507823 PSPHP1O15172 72 aa9.52□□□□□ -0.89
SFXN1-208ENST00000507823 Q5VV11 94 aa9.51□□□□□ -0.89
SFXN1-208ENST00000507823 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
SFXN1-208ENST00000507823 MT1HL1P0DM35 61 aa9.49□□□□□ -0.89
SFXN1-208ENST00000507823 PRO0628Q9UI54 55 aa9.45□□□□□ -0.9
SFXN1-208ENST00000507823 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
SFXN1-208ENST00000507823 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
SFXN1-208ENST00000507823 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
SFXN1-208ENST00000507823 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
SFXN1-208ENST00000507823 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
SFXN1-208ENST00000507823 SPINK7P58062 85 aa9.37□□□□□ -0.91
SFXN1-208ENST00000507823 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
SFXN1-208ENST00000507823 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
SFXN1-208ENST00000507823 XP32Q5T750 250 aa9.33□□□□□ -0.92
SFXN1-208ENST00000507823 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
SFXN1-208ENST00000507823 ATP11AUNQ6ZP68 121 aa9.29□□□□□ -0.92
SFXN1-208ENST00000507823 COX6B2Q6YFQ2 88 aa9.23□□□□□ -0.93
SFXN1-208ENST00000507823 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
SFXN1-208ENST00000507823 A6NED7 52 aa9.21□□□□□ -0.93
SFXN1-208ENST00000507823 LCA10Q71F78 164 aa9.19□□□□□ -0.94
SFXN1-208ENST00000507823 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
SFXN1-208ENST00000507823 A0A1B0GU69 56 aa9.18□□□□□ -0.94
SFXN1-208ENST00000507823 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
SFXN1-208ENST00000507823 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
SFXN1-208ENST00000507823 CDC42SE1Q9NRR8 79 aa9.18□□□□□ -0.94
SFXN1-208ENST00000507823 A8MU10 97 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms