RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
NFKB1-205ENST00000505458 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
NFKB1-205ENST00000505458 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
NFKB1-205ENST00000505458 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
NFKB1-205ENST00000505458 A0A087X002 238 aa6.61□□□□□ -1.35
NFKB1-205ENST00000505458 SPINK1P00995 79 aa6.61□□□□□ -1.35
NFKB1-205ENST00000505458 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
NFKB1-205ENST00000505458 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
NFKB1-205ENST00000505458 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
NFKB1-205ENST00000505458 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.36
NFKB1-205ENST00000505458 TYMSOSQ8TAI1 123 aa6.59□□□□□ -1.36
NFKB1-205ENST00000505458 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
NFKB1-205ENST00000505458 C1orf64Q8NEQ6 169 aa6.58□□□□□ -1.36
NFKB1-205ENST00000505458 PKD1P98161 4303 aa6.58□□□□□ -1.36
NFKB1-205ENST00000505458 NDUFS5O43920 106 aa6.57□□□□□ -1.36
NFKB1-205ENST00000505458 J3QL48 77 aa6.56□□□□□ -1.36
NFKB1-205ENST00000505458 C1orf195Q5TG92 126 aa6.55□□□□□ -1.36
NFKB1-205ENST00000505458 LINC00313P59037 77 aa6.55□□□□□ -1.36
NFKB1-205ENST00000505458 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
NFKB1-205ENST00000505458 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
NFKB1-205ENST00000505458 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
NFKB1-205ENST00000505458 HYDINQ4G0P3 5121 aa6.51□□□□□ -1.37
NFKB1-205ENST00000505458 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
NFKB1-205ENST00000505458 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
NFKB1-205ENST00000505458 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
NFKB1-205ENST00000505458 NOTCH2NLQ7Z3S9 236 aa6.47□□□□□ -1.37
NFKB1-205ENST00000505458 C4orf26Q17RF5 130 aa6.46□□□□□ -1.38
NFKB1-205ENST00000505458 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
NFKB1-205ENST00000505458 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
NFKB1-205ENST00000505458 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
NFKB1-205ENST00000505458 V9GYY9 64 aa6.44□□□□□ -1.38
NFKB1-205ENST00000505458 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
NFKB1-205ENST00000505458 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
NFKB1-205ENST00000505458 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
NFKB1-205ENST00000505458 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
NFKB1-205ENST00000505458 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
NFKB1-205ENST00000505458 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.39
NFKB1-205ENST00000505458 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
NFKB1-205ENST00000505458 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
NFKB1-205ENST00000505458 RYR2Q92736 4967 aa6.38□□□□□ -1.39
NFKB1-205ENST00000505458 Q1T7F1 81 aa6.38□□□□□ -1.39
NFKB1-205ENST00000505458 PRR4Q16378 134 aa6.37□□□□□ -1.39
NFKB1-205ENST00000505458 Q5W150 140 aa6.37□□□□□ -1.39
NFKB1-205ENST00000505458 IGKV2-30P06310 120 aa6.37□□□□□ -1.39
NFKB1-205ENST00000505458 COA5Q86WW8 74 aa6.34□□□□□ -1.39
NFKB1-205ENST00000505458 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
NFKB1-205ENST00000505458 ACYP2P14621 99 aa6.32□□□□□ -1.4
NFKB1-205ENST00000505458 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
NFKB1-205ENST00000505458 MPLKIPQ8TAP9 179 aa6.3□□□□□ -1.4
NFKB1-205ENST00000505458 Q5VSD8 79 aa6.3□□□□□ -1.4
NFKB1-205ENST00000505458 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
NFKB1-205ENST00000505458 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
NFKB1-205ENST00000505458 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
NFKB1-205ENST00000505458 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
NFKB1-205ENST00000505458 A8MUU9 505 aa6.28□□□□□ -1.4
NFKB1-205ENST00000505458 HRES1P13985 223 aa6.28□□□□□ -1.4
NFKB1-205ENST00000505458 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
NFKB1-205ENST00000505458 A8MUN3 132 aa6.24□□□□□ -1.41
NFKB1-205ENST00000505458 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
NFKB1-205ENST00000505458 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
NFKB1-205ENST00000505458 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
NFKB1-205ENST00000505458 Q75L30 129 aa6.22□□□□□ -1.41
NFKB1-205ENST00000505458 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
NFKB1-205ENST00000505458 Q8N1X5 172 aa6.2□□□□□ -1.42
NFKB1-205ENST00000505458 H3BS24 57 aa6.19□□□□□ -1.42
NFKB1-205ENST00000505458 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
NFKB1-205ENST00000505458 FLG2Q5D862 2391 aaPredicted RBP6.17□□□□□ -1.42
NFKB1-205ENST00000505458 FAT1Q14517 4588 aa6.17□□□□□ -1.42
NFKB1-205ENST00000505458 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
NFKB1-205ENST00000505458 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
NFKB1-205ENST00000505458 PSPHP1O15172 72 aa6.14□□□□□ -1.43
NFKB1-205ENST00000505458 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
NFKB1-205ENST00000505458 Q5VV11 94 aa6.13□□□□□ -1.43
NFKB1-205ENST00000505458 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
NFKB1-205ENST00000505458 SEC61GP60059 68 aa6.11□□□□□ -1.43
NFKB1-205ENST00000505458 RYR1P21817 5038 aa6.11□□□□□ -1.43
NFKB1-205ENST00000505458 ATP11AUNQ6ZP68 121 aa6.1□□□□□ -1.43
NFKB1-205ENST00000505458 RPL37P61927 97 aaKnown RBP6.08□□□□□ -1.44
NFKB1-205ENST00000505458 HSPG2P98160 4391 aa6.08□□□□□ -1.44
NFKB1-205ENST00000505458 SPINK7P58062 85 aa6.07□□□□□ -1.44
NFKB1-205ENST00000505458 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
NFKB1-205ENST00000505458 A6NED7 52 aa6.03□□□□□ -1.44
NFKB1-205ENST00000505458 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
NFKB1-205ENST00000505458 A0A1B0GU69 56 aa6.02□□□□□ -1.45
NFKB1-205ENST00000505458 TNXBP22105 4242 aa6.02□□□□□ -1.45
NFKB1-205ENST00000505458 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
NFKB1-205ENST00000505458 XP32Q5T750 250 aa6.01□□□□□ -1.45
NFKB1-205ENST00000505458 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
NFKB1-205ENST00000505458 RYR3Q15413 4870 aa6□□□□□ -1.45
NFKB1-205ENST00000505458 PMAIP1Q13794 54 aa6□□□□□ -1.45
NFKB1-205ENST00000505458 TPRXLQ17RH7 258 aa6□□□□□ -1.45
NFKB1-205ENST00000505458 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
NFKB1-205ENST00000505458 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.45
NFKB1-205ENST00000505458 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
NFKB1-205ENST00000505458 UQCR11O14957 56 aa5.92□□□□□ -1.46
NFKB1-205ENST00000505458 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
NFKB1-205ENST00000505458 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
NFKB1-205ENST00000505458 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
NFKB1-205ENST00000505458 LCA10Q71F78 164 aa5.89□□□□□ -1.47
NFKB1-205ENST00000505458 A6NN06 94 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms