RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SNCGO76070 127 aa2.76□□□□□ -1.97
LMNB1-208ENST00000504788 TEN1Q86WV5 123 aa2.76□□□□□ -1.97
LMNB1-208ENST00000504788 C1orf195Q5TG92 126 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 Q6ZQT0 140 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 RNF213Q63HN8 5207 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 LOC110117498A0A087WWA1 95 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 F8WEM9 126 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 HRCT1Q6UXD1 115 aa2.75□□□□□ -1.97
LMNB1-208ENST00000504788 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
LMNB1-208ENST00000504788 JMJD7-PLA2G4BH0Y9G9 81 aa2.74□□□□□ -1.97
LMNB1-208ENST00000504788 RBM3P98179 157 aaKnown RBP2.74□□□□□ -1.97
LMNB1-208ENST00000504788 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
LMNB1-208ENST00000504788 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
LMNB1-208ENST00000504788 SIGMAR1Q99720 223 aa2.74□□□□□ -1.97
LMNB1-208ENST00000504788 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
LMNB1-208ENST00000504788 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-208ENST00000504788 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
LMNB1-208ENST00000504788 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
LMNB1-208ENST00000504788 A0A087WSZ3 146 aa2.72□□□□□ -1.97
LMNB1-208ENST00000504788 CCKP06307 115 aa2.72□□□□□ -1.97
LMNB1-208ENST00000504788 F8W1H4 67 aa2.72□□□□□ -1.97
LMNB1-208ENST00000504788 LIMD2Q9BT23 127 aa2.72□□□□□ -1.97
LMNB1-208ENST00000504788 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
LMNB1-208ENST00000504788 IGLV7-46A0A075B6I9 117 aa2.71□□□□□ -1.98
LMNB1-208ENST00000504788 A0A1B0GW54 56 aa2.71□□□□□ -1.98
LMNB1-208ENST00000504788 GTF2H5Q6ZYL4 71 aa2.71□□□□□ -1.98
LMNB1-208ENST00000504788 ETDBQ3ZM63 59 aa2.7□□□□□ -1.98
LMNB1-208ENST00000504788 DSCR8Q96T75 97 aa2.7□□□□□ -1.98
LMNB1-208ENST00000504788 PDE6GP18545 87 aa2.7□□□□□ -1.98
LMNB1-208ENST00000504788 PRR4Q16378 134 aa2.7□□□□□ -1.98
LMNB1-208ENST00000504788 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
LMNB1-208ENST00000504788 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
LMNB1-208ENST00000504788 NOTCH2NLQ7Z3S9 236 aa2.68□□□□□ -1.98
LMNB1-208ENST00000504788 SMIM20Q8N5G0 67 aa2.68□□□□□ -1.98
LMNB1-208ENST00000504788 C5orf47Q569G3 176 aa2.68□□□□□ -1.98
LMNB1-208ENST00000504788 DSCR10P59022 87 aa2.67□□□□□ -1.98
LMNB1-208ENST00000504788 DEFB116Q30KQ4 102 aa2.67□□□□□ -1.98
LMNB1-208ENST00000504788 LINC00846Q9NV44 126 aa2.67□□□□□ -1.98
LMNB1-208ENST00000504788 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
LMNB1-208ENST00000504788 J3QR89 54 aa2.66□□□□□ -1.98
LMNB1-208ENST00000504788 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
LMNB1-208ENST00000504788 Q6ZVQ6 151 aa2.65□□□□□ -1.98
LMNB1-208ENST00000504788 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.99
LMNB1-208ENST00000504788 C9orf92A6NGG3 77 aa2.65□□□□□ -1.99
LMNB1-208ENST00000504788 IGKV4-1P06312 121 aa2.65□□□□□ -1.99
LMNB1-208ENST00000504788 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
LMNB1-208ENST00000504788 ANAPC13Q9BS18 74 aa2.64□□□□□ -1.99
LMNB1-208ENST00000504788 FAM240AA0A1B0GVK7 77 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 A0A1B0GVX0 72 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 A8MUU9 505 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 A8MWP4 228 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 RPL37P61927 97 aaKnown RBP2.63□□□□□ -1.99
LMNB1-208ENST00000504788 K7EQZ3 153 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 MT-ATP8P03928 68 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 NREPQ16612 68 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 PRR15Q8IV56 129 aa2.63□□□□□ -1.99
LMNB1-208ENST00000504788 J3KT08 172 aa2.62□□□□□ -1.99
LMNB1-208ENST00000504788 Q75L30 129 aa2.62□□□□□ -1.99
LMNB1-208ENST00000504788 MMP24-AS1A0A0U1RRL7 71 aa2.61□□□□□ -1.99
LMNB1-208ENST00000504788 CCDC179H3BU77 68 aa2.61□□□□□ -1.99
LMNB1-208ENST00000504788 Q8N9P0 234 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-208ENST00000504788 LINC00313P59037 77 aa2.61□□□□□ -1.99
LMNB1-208ENST00000504788 Q8N9L7 120 aa2.61□□□□□ -1.99
LMNB1-208ENST00000504788 C8orf17Q9NRJ1 99 aa2.61□□□□□ -1.99
LMNB1-208ENST00000504788 IGHV6-1A0A0B4J1U7 121 aa2.6□□□□□ -1.99
LMNB1-208ENST00000504788 C8orf87E5RJ46 101 aa2.6□□□□□ -1.99
LMNB1-208ENST00000504788 ACYP1P07311 99 aa2.6□□□□□ -1.99
LMNB1-208ENST00000504788 BPY2O14599 106 aa2.59□□□□□ -1.99
LMNB1-208ENST00000504788 CXCL6P80162 114 aa2.59□□□□□ -1.99
LMNB1-208ENST00000504788 PCOTHQ58A44 107 aa2.59□□□□□ -1.99
LMNB1-208ENST00000504788 UBL5Q9BZL1 73 aa2.59□□□□□ -1.99
LMNB1-208ENST00000504788 SEC61BP60468 96 aaKnown RBP2.58□□□□□ -2
LMNB1-208ENST00000504788 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
LMNB1-208ENST00000504788 NDUFB1O75438 58 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 TMEM254Q8TBM7 123 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 MRPL34Q9BQ48 92 aaKnown RBP2.56□□□□□ -2
LMNB1-208ENST00000504788 KRTAP3-1Q9BYR8 98 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 hDV103S1A0JD37 113 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
LMNB1-208ENST00000504788 Q5W150 140 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 LINC00643Q86TS7 51 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 MPLKIPQ8TAP9 179 aa2.56□□□□□ -2
LMNB1-208ENST00000504788 HCG22E2RYF7 251 aa2.54□□□□□ -2
LMNB1-208ENST00000504788 ATP5EP2Q5VTU8 51 aa2.54□□□□□ -2
LMNB1-208ENST00000504788 A0A087WVE0 104 aa2.54□□□□□ -2
LMNB1-208ENST00000504788 WFDC13Q8IUB5 93 aa2.54□□□□□ -2
LMNB1-208ENST00000504788 ZCCHC13Q8WW36 166 aaKnown RBP2.54□□□□□ -2
LMNB1-208ENST00000504788 HRES1P13985 223 aa2.53□□□□□ -2
LMNB1-208ENST00000504788 SEC61GP60059 68 aa2.53□□□□□ -2
LMNB1-208ENST00000504788 CASC2Q6XLA1 102 aa2.53□□□□□ -2
LMNB1-208ENST00000504788 ATP11AUNQ6ZP68 121 aa2.53□□□□□ -2
LMNB1-208ENST00000504788 UQCRQO14949 82 aa2.51□□□□□ -2.01
LMNB1-208ENST00000504788 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
LMNB1-208ENST00000504788 HIST1H4AP62805 103 aaKnown RBP2.5□□□□□ -2.01
LMNB1-208ENST00000504788 MT1HP80294 61 aa2.5□□□□□ -2.01
LMNB1-208ENST00000504788 C4orf26Q17RF5 130 aa2.5□□□□□ -2.01
LMNB1-208ENST00000504788 SPINK7P58062 85 aa2.49□□□□□ -2.01
LMNB1-208ENST00000504788 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
LMNB1-208ENST00000504788 IMUPQ9GZP8 106 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 324 ms