RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
ALYREF-201ENST00000504015 C8orf87E5RJ46 101 aa2.32□□□□□ -2.04
ALYREF-201ENST00000504015 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
ALYREF-201ENST00000504015 SRRM2Q9UQ35 2752 aaKnown RBP2.32□□□□□ -2.04
ALYREF-201ENST00000504015 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
ALYREF-201ENST00000504015 LINC00336Q6ZUF6 198 aa2.31□□□□□ -2.04
ALYREF-201ENST00000504015 MPLKIPQ8TAP9 179 aa2.31□□□□□ -2.04
ALYREF-201ENST00000504015 LIMD2Q9BT23 127 aa2.31□□□□□ -2.04
ALYREF-201ENST00000504015 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
ALYREF-201ENST00000504015 IGHV6-1A0A0B4J1U7 121 aa2.3□□□□□ -2.04
ALYREF-201ENST00000504015 LY6G6CO95867 125 aa2.3□□□□□ -2.04
ALYREF-201ENST00000504015 Q6ZSA8 131 aa2.3□□□□□ -2.04
ALYREF-201ENST00000504015 CSMD3Q7Z407 3707 aa2.3□□□□□ -2.04
ALYREF-201ENST00000504015 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
ALYREF-201ENST00000504015 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
ALYREF-201ENST00000504015 LYSTQ99698 3801 aa2.29□□□□□ -2.04
ALYREF-201ENST00000504015 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
ALYREF-201ENST00000504015 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 FAT4Q6V0I7 4981 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 NDUFS5O43920 106 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 PRR4Q16378 134 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 Q8N9P0 234 aaPredicted RBP2.28□□□□□ -2.04
ALYREF-201ENST00000504015 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 DNAH8Q96JB1 4490 aa2.28□□□□□ -2.04
ALYREF-201ENST00000504015 DNAH6Q9C0G6 4158 aa2.28□□□□□ -2.05
ALYREF-201ENST00000504015 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 FAM229AH3BQW9 127 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 LINC00313P59037 77 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP13-3Q3SY46 172 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 COA5Q86WW8 74 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 HECTD4Q9Y4D8 3996 aa2.27□□□□□ -2.05
ALYREF-201ENST00000504015 SPINK1P00995 79 aa2.26□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP10-2P60368 255 aa2.26□□□□□ -2.05
ALYREF-201ENST00000504015 RPS29P62273 56 aaKnown RBP2.26□□□□□ -2.05
ALYREF-201ENST00000504015 PCOTHQ58A44 107 aa2.26□□□□□ -2.05
ALYREF-201ENST00000504015 C4orf48Q5BLP8 95 aa2.26□□□□□ -2.05
ALYREF-201ENST00000504015 SPINK6Q6UWN8 80 aa2.26□□□□□ -2.05
ALYREF-201ENST00000504015 A0A087X002 238 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 ACYP2P14621 99 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 SPAG11AQ6PDA7 123 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 Q75L30 129 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 NOTCH2NLQ7Z3S9 236 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
ALYREF-201ENST00000504015 A8MUN3 132 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 PSPHP1O15172 72 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 HRES1P13985 223 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP10-1P60331 282 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP13-2Q52LG2 175 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 Q5VV11 94 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 Q5W150 140 aa2.24□□□□□ -2.05
ALYREF-201ENST00000504015 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP16-1A8MUX0 517 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 CHKB-CPT1BH3BT56 60 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 PLA2G1BP04054 148 aaKnown RBP2.23□□□□□ -2.05
ALYREF-201ENST00000504015 IGKV2-30P06310 120 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 PRR26Q8N8Z3 221 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 DMBT1Q9UGM3 2413 aaPredicted RBP2.23□□□□□ -2.05
ALYREF-201ENST00000504015 PKD1P98161 4303 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 ALMS1Q8TCU4 4167 aa2.23□□□□□ -2.05
ALYREF-201ENST00000504015 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
ALYREF-201ENST00000504015 TYMSOSQ8TAI1 123 aa2.22□□□□□ -2.05
ALYREF-201ENST00000504015 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
ALYREF-201ENST00000504015 ATP11AUNQ6ZP68 121 aa2.21□□□□□ -2.06
ALYREF-201ENST00000504015 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
ALYREF-201ENST00000504015 RNF213Q63HN8 5207 aa2.21□□□□□ -2.06
ALYREF-201ENST00000504015 A6NED7 52 aa2.2□□□□□ -2.06
ALYREF-201ENST00000504015 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
ALYREF-201ENST00000504015 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
ALYREF-201ENST00000504015 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
ALYREF-201ENST00000504015 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
ALYREF-201ENST00000504015 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 IGKV2D-30A0A075B6S6 120 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 PMAIP1Q13794 54 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 KRTAP4-5Q9BYR2 181 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 KMT2AQ03164 3969 aa2.18□□□□□ -2.06
ALYREF-201ENST00000504015 FAT2Q9NYQ8 4349 aa2.17□□□□□ -2.06
ALYREF-201ENST00000504015 A0A1B0GU69 56 aa2.17□□□□□ -2.06
ALYREF-201ENST00000504015 LCA10Q71F78 164 aa2.17□□□□□ -2.06
ALYREF-201ENST00000504015 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
ALYREF-201ENST00000504015 A0A1B0GVY2 172 aa2.16□□□□□ -2.06
ALYREF-201ENST00000504015 A8MUU9 505 aa2.16□□□□□ -2.06
ALYREF-201ENST00000504015 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
ALYREF-201ENST00000504015 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
ALYREF-201ENST00000504015 A6NN06 94 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 UQCR11O14957 56 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 SPINK7P58062 85 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 KRTAP10-4P60372 401 aaPredicted RBP2.14□□□□□ -2.07
ALYREF-201ENST00000504015 SPATA8Q6RVD6 105 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 RETNLBQ9BQ08 111 aa2.14□□□□□ -2.07
ALYREF-201ENST00000504015 SEC61GP60059 68 aa2.13□□□□□ -2.07
ALYREF-201ENST00000504015 A8MU10 97 aa2.12□□□□□ -2.07
ALYREF-201ENST00000504015 VPS13BQ7Z7G8 4022 aa2.11□□□□□ -2.07
ALYREF-201ENST00000504015 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
ALYREF-201ENST00000504015 SMR3BP02814 79 aaPredicted RBP2.11□□□□□ -2.07
ALYREF-201ENST00000504015 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms