RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 ATOX1O00244 68 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 Q8N9L7 120 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 KRTAP29-1A8MX34 341 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-202ENST00000503338 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
TOPBP1-202ENST00000503338 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
TOPBP1-202ENST00000503338 C8orf17Q9NRJ1 99 aa4.61□□□□□ -1.67
TOPBP1-202ENST00000503338 hDV103S1A0JD37 113 aa4.6□□□□□ -1.67
TOPBP1-202ENST00000503338 MT1HL1P0DM35 61 aa4.6□□□□□ -1.67
TOPBP1-202ENST00000503338 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
TOPBP1-202ENST00000503338 FP248Q71RG6 208 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-202ENST00000503338 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-202ENST00000503338 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
TOPBP1-202ENST00000503338 EPPK1P58107 5090 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-202ENST00000503338 LINC00313P59037 77 aa4.59□□□□□ -1.67
TOPBP1-202ENST00000503338 PKHD1L1Q86WI1 4243 aa4.59□□□□□ -1.67
TOPBP1-202ENST00000503338 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
TOPBP1-202ENST00000503338 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
TOPBP1-202ENST00000503338 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
TOPBP1-202ENST00000503338 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
TOPBP1-202ENST00000503338 H3BS24 57 aa4.57□□□□□ -1.68
TOPBP1-202ENST00000503338 XP32Q5T750 250 aa4.57□□□□□ -1.68
TOPBP1-202ENST00000503338 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
TOPBP1-202ENST00000503338 TRAV7A0A075B6U4 112 aa4.56□□□□□ -1.68
TOPBP1-202ENST00000503338 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
TOPBP1-202ENST00000503338 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-202ENST00000503338 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
TOPBP1-202ENST00000503338 TP53AIP1Q9HCN2 124 aa4.56□□□□□ -1.68
TOPBP1-202ENST00000503338 DMBT1Q9UGM3 2413 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-202ENST00000503338 UQCRQO14949 82 aa4.54□□□□□ -1.68
TOPBP1-202ENST00000503338 COX7CP15954 63 aa4.53□□□□□ -1.68
TOPBP1-202ENST00000503338 PCP4P48539 62 aa4.53□□□□□ -1.68
TOPBP1-202ENST00000503338 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
TOPBP1-202ENST00000503338 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
TOPBP1-202ENST00000503338 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
TOPBP1-202ENST00000503338 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
TOPBP1-202ENST00000503338 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
TOPBP1-202ENST00000503338 NDUFS5O43920 106 aa4.51□□□□□ -1.69
TOPBP1-202ENST00000503338 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
TOPBP1-202ENST00000503338 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-202ENST00000503338 H3BPC8 53 aa4.5□□□□□ -1.69
TOPBP1-202ENST00000503338 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
TOPBP1-202ENST00000503338 MP68P56378 58 aa4.49□□□□□ -1.69
TOPBP1-202ENST00000503338 TNXBP22105 4242 aa4.49□□□□□ -1.69
TOPBP1-202ENST00000503338 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
TOPBP1-202ENST00000503338 PRR4Q16378 134 aa4.48□□□□□ -1.69
TOPBP1-202ENST00000503338 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-202ENST00000503338 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-202ENST00000503338 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
TOPBP1-202ENST00000503338 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 A8MUU9 505 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 Q75L30 129 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
TOPBP1-202ENST00000503338 H0Y9P7 68 aa4.45□□□□□ -1.7
TOPBP1-202ENST00000503338 KLKP1Q107X0 134 aa4.45□□□□□ -1.7
TOPBP1-202ENST00000503338 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
TOPBP1-202ENST00000503338 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
TOPBP1-202ENST00000503338 NDUFC1O43677 76 aa4.44□□□□□ -1.7
TOPBP1-202ENST00000503338 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
TOPBP1-202ENST00000503338 HERC2O95714 4834 aa4.43□□□□□ -1.7
TOPBP1-202ENST00000503338 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
TOPBP1-202ENST00000503338 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
TOPBP1-202ENST00000503338 A0A0U1RQV1 116 aa4.42□□□□□ -1.7
TOPBP1-202ENST00000503338 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
TOPBP1-202ENST00000503338 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-202ENST00000503338 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
TOPBP1-202ENST00000503338 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
TOPBP1-202ENST00000503338 RPL37P61927 97 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-202ENST00000503338 ATP11AUNQ6ZP68 121 aa4.4□□□□□ -1.71
TOPBP1-202ENST00000503338 Q5W150 140 aa4.39□□□□□ -1.71
TOPBP1-202ENST00000503338 SNURFQ9Y675 71 aa4.39□□□□□ -1.71
TOPBP1-202ENST00000503338 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
TOPBP1-202ENST00000503338 C7orf65Q6ZTY9 151 aa4.36□□□□□ -1.71
TOPBP1-202ENST00000503338 TMEM258P61165 79 aa4.35□□□□□ -1.71
TOPBP1-202ENST00000503338 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
TOPBP1-202ENST00000503338 H7BZZ5 65 aa4.34□□□□□ -1.71
TOPBP1-202ENST00000503338 ATP5EP56381 51 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-202ENST00000503338 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
TOPBP1-202ENST00000503338 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-202ENST00000503338 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
TOPBP1-202ENST00000503338 SPANXA2-OT1Q8N9U9 137 aa4.33□□□□□ -1.72
TOPBP1-202ENST00000503338 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
TOPBP1-202ENST00000503338 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
TOPBP1-202ENST00000503338 SPINK7P58062 85 aa4.3□□□□□ -1.72
TOPBP1-202ENST00000503338 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
TOPBP1-202ENST00000503338 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
TOPBP1-202ENST00000503338 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
TOPBP1-202ENST00000503338 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
TOPBP1-202ENST00000503338 HRES1P13985 223 aa4.26□□□□□ -1.73
TOPBP1-202ENST00000503338 A8MUN3 132 aa4.25□□□□□ -1.73
TOPBP1-202ENST00000503338 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
TOPBP1-202ENST00000503338 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
TOPBP1-202ENST00000503338 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
TOPBP1-202ENST00000503338 ACYP2P14621 99 aa4.23□□□□□ -1.73
TOPBP1-202ENST00000503338 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
TOPBP1-202ENST00000503338 SERP1Q9Y6X1 66 aa4.21□□□□□ -1.74
TOPBP1-202ENST00000503338 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms