RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 A0A087WSZ3 146 aa10.08□□□□□ -0.8
ELL3-208ENST00000497700 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
ELL3-208ENST00000497700 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
ELL3-208ENST00000497700 CXCL6P80162 114 aa10.08□□□□□ -0.8
ELL3-208ENST00000497700 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
ELL3-208ENST00000497700 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
ELL3-208ENST00000497700 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
ELL3-208ENST00000497700 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
ELL3-208ENST00000497700 NREPQ16612 68 aa10.04□□□□□ -0.8
ELL3-208ENST00000497700 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
ELL3-208ENST00000497700 ATOX1O00244 68 aa10.03□□□□□ -0.8
ELL3-208ENST00000497700 SS18L2Q9UHA2 77 aa10.01□□□□□ -0.81
ELL3-208ENST00000497700 SPINK1P00995 79 aa9.98□□□□□ -0.81
ELL3-208ENST00000497700 Q5XG85 94 aa9.97□□□□□ -0.81
ELL3-208ENST00000497700 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
ELL3-208ENST00000497700 A0A087WVE0 104 aa9.94□□□□□ -0.82
ELL3-208ENST00000497700 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
ELL3-208ENST00000497700 RPS29P62273 56 aaKnown RBP9.94□□□□□ -0.82
ELL3-208ENST00000497700 LIMD2Q9BT23 127 aa9.94□□□□□ -0.82
ELL3-208ENST00000497700 BPY2O14599 106 aa9.93□□□□□ -0.82
ELL3-208ENST00000497700 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
ELL3-208ENST00000497700 Q96NJ1 140 aa9.92□□□□□ -0.82
ELL3-208ENST00000497700 UQCRQO14949 82 aa9.91□□□□□ -0.82
ELL3-208ENST00000497700 COX7CP15954 63 aa9.91□□□□□ -0.82
ELL3-208ENST00000497700 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
ELL3-208ENST00000497700 DEFB116Q30KQ4 102 aa9.9□□□□□ -0.82
ELL3-208ENST00000497700 SERP2Q8N6R1 65 aa9.9□□□□□ -0.82
ELL3-208ENST00000497700 J3KT08 172 aa9.89□□□□□ -0.83
ELL3-208ENST00000497700 CCDC179H3BU77 68 aa9.88□□□□□ -0.83
ELL3-208ENST00000497700 DSCR10P59022 87 aa9.87□□□□□ -0.83
ELL3-208ENST00000497700 XP32Q5T750 250 aa9.87□□□□□ -0.83
ELL3-208ENST00000497700 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
ELL3-208ENST00000497700 CRCT1Q9UGL9 99 aa9.87□□□□□ -0.83
ELL3-208ENST00000497700 FSIP2Q5CZC0 6907 aa9.87□□□□□ -0.83
ELL3-208ENST00000497700 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
ELL3-208ENST00000497700 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
ELL3-208ENST00000497700 KRTAP19-2Q3LHN2 52 aa9.82□□□□□ -0.84
ELL3-208ENST00000497700 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
ELL3-208ENST00000497700 A8MWP4 228 aa9.81□□□□□ -0.84
ELL3-208ENST00000497700 Q8N9L7 120 aa9.8□□□□□ -0.84
ELL3-208ENST00000497700 K7EQZ3 153 aa9.79□□□□□ -0.84
ELL3-208ENST00000497700 NDUFB1O75438 58 aa9.77□□□□□ -0.85
ELL3-208ENST00000497700 PRR15Q8IV56 129 aa9.77□□□□□ -0.85
ELL3-208ENST00000497700 MT1HP80294 61 aa9.76□□□□□ -0.85
ELL3-208ENST00000497700 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
ELL3-208ENST00000497700 A0A1B0GVX0 72 aa9.74□□□□□ -0.85
ELL3-208ENST00000497700 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
ELL3-208ENST00000497700 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
ELL3-208ENST00000497700 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
ELL3-208ENST00000497700 MMP24-AS1A0A0U1RRL7 71 aa9.66□□□□□ -0.86
ELL3-208ENST00000497700 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
ELL3-208ENST00000497700 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
ELL3-208ENST00000497700 OCR1Q9BZK8 76 aa9.65□□□□□ -0.86
ELL3-208ENST00000497700 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
ELL3-208ENST00000497700 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
ELL3-208ENST00000497700 KRTAP10-6P60371 365 aaPredicted RBP9.62□□□□□ -0.87
ELL3-208ENST00000497700 CASC2Q6XLA1 102 aa9.62□□□□□ -0.87
ELL3-208ENST00000497700 WFDC13Q8IUB5 93 aa9.62□□□□□ -0.87
ELL3-208ENST00000497700 LINC00313P59037 77 aa9.61□□□□□ -0.87
ELL3-208ENST00000497700 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
ELL3-208ENST00000497700 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
ELL3-208ENST00000497700 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
ELL3-208ENST00000497700 TMEM258P61165 79 aa9.6□□□□□ -0.87
ELL3-208ENST00000497700 NDUFC1O43677 76 aa9.59□□□□□ -0.87
ELL3-208ENST00000497700 TMEM254Q8TBM7 123 aa9.57□□□□□ -0.88
ELL3-208ENST00000497700 KRTAP16-1A8MUX0 517 aa9.54□□□□□ -0.88
ELL3-208ENST00000497700 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
ELL3-208ENST00000497700 MRPL34Q9BQ48 92 aaKnown RBP9.54□□□□□ -0.88
ELL3-208ENST00000497700 M0R2T5 61 aa9.53□□□□□ -0.88
ELL3-208ENST00000497700 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
ELL3-208ENST00000497700 CYSTM1Q9H1C7 97 aa9.5□□□□□ -0.89
ELL3-208ENST00000497700 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
ELL3-208ENST00000497700 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
ELL3-208ENST00000497700 SNURFQ9Y675 71 aa9.48□□□□□ -0.89
ELL3-208ENST00000497700 H7BZZ5 65 aa9.47□□□□□ -0.89
ELL3-208ENST00000497700 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
ELL3-208ENST00000497700 H3BPC8 53 aa9.45□□□□□ -0.9
ELL3-208ENST00000497700 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
ELL3-208ENST00000497700 NDUFS5O43920 106 aa9.44□□□□□ -0.9
ELL3-208ENST00000497700 MP68P56378 58 aa9.44□□□□□ -0.9
ELL3-208ENST00000497700 ATP5EP56381 51 aaPredicted RBP9.44□□□□□ -0.9
ELL3-208ENST00000497700 TP53AIP1Q9HCN2 124 aa9.43□□□□□ -0.9
ELL3-208ENST00000497700 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
ELL3-208ENST00000497700 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
ELL3-208ENST00000497700 C20orf166-AS1Q96NR2 134 aa9.41□□□□□ -0.9
ELL3-208ENST00000497700 A8MUU9 505 aa9.4□□□□□ -0.9
ELL3-208ENST00000497700 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
ELL3-208ENST00000497700 Q75L30 129 aa9.35□□□□□ -0.91
ELL3-208ENST00000497700 H0Y9P7 68 aa9.33□□□□□ -0.92
ELL3-208ENST00000497700 Q5W150 140 aa9.31□□□□□ -0.92
ELL3-208ENST00000497700 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
ELL3-208ENST00000497700 TRAV22A0A0B4J277 110 aa9.3□□□□□ -0.92
ELL3-208ENST00000497700 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
ELL3-208ENST00000497700 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
ELL3-208ENST00000497700 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.23□□□□□ -0.93
ELL3-208ENST00000497700 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
ELL3-208ENST00000497700 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.94
ELL3-208ENST00000497700 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
ELL3-208ENST00000497700 CYP4F30PQ9H0H9 118 aa9.19□□□□□ -0.94
ELL3-208ENST00000497700 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms