RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PKD1L1Q8TDX9 2849 aa0.78□□□□□ -2.29
VPS36-206ENST00000497149 APC2O95996 2303 aa0.77□□□□□ -2.29
VPS36-206ENST00000497149 MAP1BP46821 2468 aaKnown RBP0.77□□□□□ -2.29
VPS36-206ENST00000497149 TNRC18O15417 2968 aaPredicted RBP0.77□□□□□ -2.29
VPS36-206ENST00000497149 C9orf92A6NGG3 77 aa0.77□□□□□ -2.29
VPS36-206ENST00000497149 EPG5Q9HCE0 2579 aa0.77□□□□□ -2.29
VPS36-206ENST00000497149 NF1P21359 2839 aa0.77□□□□□ -2.29
VPS36-206ENST00000497149 OTOGQ6ZRI0 2925 aa0.76□□□□□ -2.29
VPS36-206ENST00000497149 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
VPS36-206ENST00000497149 FAM186AA6NE01 2351 aa0.76□□□□□ -2.29
VPS36-206ENST00000497149 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
VPS36-206ENST00000497149 TMEM167AQ8TBQ9 72 aa0.75□□□□□ -2.29
VPS36-206ENST00000497149 FLNCQ14315 2725 aa0.75□□□□□ -2.29
VPS36-206ENST00000497149 MTORP42345 2549 aa0.75□□□□□ -2.29
VPS36-206ENST00000497149 SETXQ7Z333 2677 aaKnown RBP0.74□□□□□ -2.29
VPS36-206ENST00000497149 TNP1P09430 55 aa0.74□□□□□ -2.29
VPS36-206ENST00000497149 NCOR2Q9Y618 2525 aa0.74□□□□□ -2.29
VPS36-206ENST00000497149 CCDC168Q8NDH2 2452 aa0.74□□□□□ -2.29
VPS36-206ENST00000497149 TENM2Q9NT68 2774 aa0.74□□□□□ -2.29
VPS36-206ENST00000497149 ZFYVE26Q68DK2 2539 aa0.73□□□□□ -2.29
VPS36-206ENST00000497149 DEFB104AQ8WTQ1 72 aa0.73□□□□□ -2.29
VPS36-206ENST00000497149 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
VPS36-206ENST00000497149 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
VPS36-206ENST00000497149 DCHS2Q6V1P9 2916 aa0.73□□□□□ -2.29
VPS36-206ENST00000497149 FRYQ5TBA9 3013 aa0.72□□□□□ -2.29
VPS36-206ENST00000497149 ACANP16112 2415 aa0.72□□□□□ -2.29
VPS36-206ENST00000497149 SPART-AS1P0CW21 52 aa0.72□□□□□ -2.29
VPS36-206ENST00000497149 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
VPS36-206ENST00000497149 BSNQ9UPA5 3926 aa0.71□□□□□ -2.3
VPS36-206ENST00000497149 COL12A1Q99715 3063 aa0.71□□□□□ -2.3
VPS36-206ENST00000497149 SPTBN4Q9H254 2564 aa0.71□□□□□ -2.3
VPS36-206ENST00000497149 H3BNG1 76 aa0.7□□□□□ -2.3
VPS36-206ENST00000497149 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
VPS36-206ENST00000497149 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
VPS36-206ENST00000497149 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
VPS36-206ENST00000497149 SPG11Q96JI7 2443 aa0.7□□□□□ -2.3
VPS36-206ENST00000497149 UTP20O75691 2785 aaKnown RBP0.7□□□□□ -2.3
VPS36-206ENST00000497149 CEP250Q9BV73 2442 aa0.69□□□□□ -2.3
VPS36-206ENST00000497149 NBEAQ8NFP9 2946 aa0.69□□□□□ -2.3
VPS36-206ENST00000497149 GCN1Q92616 2671 aaKnown RBP0.69□□□□□ -2.3
VPS36-206ENST00000497149 PDZD2O15018 2839 aa0.69□□□□□ -2.3
VPS36-206ENST00000497149 ANK2Q01484 3957 aa0.69□□□□□ -2.3
VPS36-206ENST00000497149 NBEAL2Q6ZNJ1 2754 aa0.67□□□□□ -2.3
VPS36-206ENST00000497149 DMXL1Q9Y485 3027 aa0.67□□□□□ -2.3
VPS36-206ENST00000497149 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
VPS36-206ENST00000497149 H3BUX3 64 aa0.66□□□□□ -2.3
VPS36-206ENST00000497149 RPL39P5Q59GN2 51 aa0.66□□□□□ -2.3
VPS36-206ENST00000497149 DEFB108AA8MXU0 73 aa0.65□□□□□ -2.31
VPS36-206ENST00000497149 TACC2O95359 2948 aa0.65□□□□□ -2.31
VPS36-206ENST00000497149 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.31
VPS36-206ENST00000497149 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
VPS36-206ENST00000497149 IGSF10Q6WRI0 2623 aa0.64□□□□□ -2.31
VPS36-206ENST00000497149 DEFB110Q30KQ9 67 aa0.64□□□□□ -2.31
VPS36-206ENST00000497149 RHPN1-AS1Q9BWJ2 59 aa0.64□□□□□ -2.31
VPS36-206ENST00000497149 CRYBG3Q68DQ2 2970 aa0.64□□□□□ -2.31
VPS36-206ENST00000497149 LYSTQ99698 3801 aa0.64□□□□□ -2.31
VPS36-206ENST00000497149 ANKHD1Q8IWZ3 2542 aaKnown RBP0.64□□□□□ -2.31
VPS36-206ENST00000497149 ITPR3Q14573 2671 aa0.63□□□□□ -2.31
VPS36-206ENST00000497149 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
VPS36-206ENST00000497149 PRM1P04553 51 aa0.63□□□□□ -2.31
VPS36-206ENST00000497149 USP9XQ93008 2570 aaPredicted RBP0.63□□□□□ -2.31
VPS36-206ENST00000497149 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
VPS36-206ENST00000497149 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
VPS36-206ENST00000497149 ITPR1Q14643 2758 aa0.62□□□□□ -2.31
VPS36-206ENST00000497149 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
VPS36-206ENST00000497149 ACACBO00763 2458 aa0.61□□□□□ -2.31
VPS36-206ENST00000497149 KALRNO60229 2985 aa0.61□□□□□ -2.31
VPS36-206ENST00000497149 PRKDCP78527 4128 aaKnown RBP0.61□□□□□ -2.31
VPS36-206ENST00000497149 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
VPS36-206ENST00000497149 SONP18583 2426 aaKnown RBP0.6□□□□□ -2.31
VPS36-206ENST00000497149 HRNRQ86YZ3 2850 aaPredicted RBP0.6□□□□□ -2.31
VPS36-206ENST00000497149 FLNAP21333 2647 aaKnown RBP0.6□□□□□ -2.31
VPS36-206ENST00000497149 MYO18BQ8IUG5 2567 aa0.59□□□□□ -2.31
VPS36-206ENST00000497149 MAST4O15021 2626 aa0.59□□□□□ -2.31
VPS36-206ENST00000497149 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.31
VPS36-206ENST00000497149 TLN2Q9Y4G6 2542 aa0.59□□□□□ -2.31
VPS36-206ENST00000497149 CELSR3Q9NYQ7 3312 aa0.59□□□□□ -2.32
VPS36-206ENST00000497149 CACNA1AO00555 2505 aa0.59□□□□□ -2.32
VPS36-206ENST00000497149 ZFHX4Q86UP3 3567 aa0.58□□□□□ -2.32
VPS36-206ENST00000497149 ZANQ9Y493 2812 aa0.58□□□□□ -2.32
VPS36-206ENST00000497149 CFAP54Q96N23 3096 aa0.58□□□□□ -2.32
VPS36-206ENST00000497149 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
VPS36-206ENST00000497149 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
VPS36-206ENST00000497149 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
VPS36-206ENST00000497149 TNXBP22105 4242 aa0.57□□□□□ -2.32
VPS36-206ENST00000497149 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
VPS36-206ENST00000497149 DMXL2Q8TDJ6 3036 aa0.56□□□□□ -2.32
VPS36-206ENST00000497149 A0A096LNI7 61 aa0.56□□□□□ -2.32
VPS36-206ENST00000497149 SPRR2DP22532 72 aa0.56□□□□□ -2.32
VPS36-206ENST00000497149 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
VPS36-206ENST00000497149 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
VPS36-206ENST00000497149 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 HUWE1Q7Z6Z7 4374 aaKnown RBP0.55□□□□□ -2.32
VPS36-206ENST00000497149 ADGRG4Q8IZF6 3080 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 HTN1P15515 57 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 SPRR2BP35325 72 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 MXRA5Q9NR99 2828 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
VPS36-206ENST00000497149 RANBP2P49792 3224 aaKnown RBP0.55□□□□□ -2.32
VPS36-206ENST00000497149 LRBAP50851 2863 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms