RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PEA15Q15121 130 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 ATMQ13315 3056 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 DMXL2Q8TDJ6 3036 aa-0.78□□□□□ -2.53
CD46-218ENST00000496723 NRAPQ86VF7 1730 aa-0.78□□□□□ -2.53
CD46-218ENST00000496723 RNF17Q9BXT8 1623 aaKnown RBP-0.78□□□□□ -2.53
CD46-218ENST00000496723 PLIN4Q96Q06 1357 aa-0.78□□□□□ -2.53
CD46-218ENST00000496723 M0R143 59 aa-0.78□□□□□ -2.53
CD46-218ENST00000496723 CYB5AP00167 134 aa-0.78□□□□□ -2.53
CD46-218ENST00000496723 SMR3BP02814 79 aaPredicted RBP-0.78□□□□□ -2.53
CD46-218ENST00000496723 MAP3K4Q9Y6R4 1608 aa-0.78□□□□□ -2.54
CD46-218ENST00000496723 ITPR2Q14571 2701 aa-0.79□□□□□ -2.54
CD46-218ENST00000496723 IFI6P09912 130 aa-0.79□□□□□ -2.54
CD46-218ENST00000496723 MT1XP80297 61 aa-0.79□□□□□ -2.54
CD46-218ENST00000496723 CDC42BPAQ5VT25 1732 aa-0.79□□□□□ -2.54
CD46-218ENST00000496723 KIF1AQ12756 1690 aa-0.79□□□□□ -2.54
CD46-218ENST00000496723 K7EP34 96 aa-0.8□□□□□ -2.54
CD46-218ENST00000496723 GYPAP02724 150 aa-0.8□□□□□ -2.54
CD46-218ENST00000496723 URB2Q14146 1524 aaKnown RBP-0.8□□□□□ -2.54
CD46-218ENST00000496723 LRRIQ1Q96JM4 1722 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 CEBPZOSA8MTT3 80 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 NDUFA4O00483 81 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 ZFHX4Q86UP3 3567 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 VPS8Q8N3P4 1428 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 NHSQ6T4R5 1651 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 CSMD2Q7Z408 3487 aa-0.81□□□□□ -2.54
CD46-218ENST00000496723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.82□□□□□ -2.54
CD46-218ENST00000496723 UMAD1C9J7I0 102 aa-0.82□□□□□ -2.54
CD46-218ENST00000496723 CRYBG3Q68DQ2 2970 aa-0.82□□□□□ -2.54
CD46-218ENST00000496723 TLN1Q9Y490 2541 aaKnown RBP-0.82□□□□□ -2.54
CD46-218ENST00000496723 ABCA13Q86UQ4 5058 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 ABCC3O15438 1527 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 KIAA0586Q9BVV6 1533 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 NDUFB1O75438 58 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 PKIAP61925 76 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 SNRPFP62306 86 aaKnown RBP-0.83□□□□□ -2.54
CD46-218ENST00000496723 NREPQ16612 68 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 TDRG1Q3Y452 100 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 LINC00643Q86TS7 51 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 S100A16Q96FQ6 103 aaKnown RBP-0.83□□□□□ -2.54
CD46-218ENST00000496723 A0A1B0GUL6 1792 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 VPS13CQ709C8 3753 aa-0.83□□□□□ -2.54
CD46-218ENST00000496723 MYO5CQ9NQX4 1742 aa-0.84□□□□□ -2.54
CD46-218ENST00000496723 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.84□□□□□ -2.54
CD46-218ENST00000496723 IFI27P40305 119 aaPredicted RBP-0.84□□□□□ -2.54
CD46-218ENST00000496723 CRIP1P50238 77 aa-0.84□□□□□ -2.54
CD46-218ENST00000496723 PYY3Q5JQD4 70 aa-0.84□□□□□ -2.54
CD46-218ENST00000496723 CCDC88BA6NC98 1476 aa-0.85□□□□□ -2.55
CD46-218ENST00000496723 RPS27P42677 84 aaKnown RBP-0.85□□□□□ -2.55
CD46-218ENST00000496723 WT1-ASQ06250 92 aa-0.85□□□□□ -2.55
CD46-218ENST00000496723 TTC37Q6PGP7 1564 aa-0.85□□□□□ -2.55
CD46-218ENST00000496723 RPS27LQ71UM5 84 aaKnown RBP-0.85□□□□□ -2.55
CD46-218ENST00000496723 KRTAP8-1Q8IUC2 63 aa-0.85□□□□□ -2.55
CD46-218ENST00000496723 CCNB3Q8WWL7 1395 aa-0.85□□□□□ -2.55
CD46-218ENST00000496723 THOC2Q8NI27 1593 aaKnown RBP-0.86□□□□□ -2.55
CD46-218ENST00000496723 INO80Q9ULG1 1556 aaPredicted RBP-0.86□□□□□ -2.55
CD46-218ENST00000496723 IGLV5-48A0A075B6I7 105 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 DEFB131BA0A096LNP1 70 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 MT1EP04732 61 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 S100A8P05109 93 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 HMGA1P17096 107 aaKnown RBP-0.86□□□□□ -2.55
CD46-218ENST00000496723 NCBP2-AS2Q69YL0 99 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 CLPSL2Q6UWE3 100 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 ARHGAP35Q9NRY4 1499 aa-0.86□□□□□ -2.55
CD46-218ENST00000496723 CFAP54Q96N23 3096 aa-0.87□□□□□ -2.55
CD46-218ENST00000496723 TNP1P09430 55 aa-0.87□□□□□ -2.55
CD46-218ENST00000496723 MYO15AQ9UKN7 3530 aa-0.87□□□□□ -2.55
CD46-218ENST00000496723 PRUNE2Q8WUY3 3088 aa-0.87□□□□□ -2.55
CD46-218ENST00000496723 ASXL1Q8IXJ9 1541 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 MMP24-AS1A0A0U1RRL7 71 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 SMIM13P0DJ93 91 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 MT1GP13640 62 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 MT1LQ93083 61 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.88□□□□□ -2.55
CD46-218ENST00000496723 MAST1Q9Y2H9 1570 aa-0.88□□□□□ -2.55
CD46-218ENST00000496723 KDM5DQ9BY66 1539 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 SFTA3P0C7M3 94 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 DEFB121Q5J5C9 76 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 KCNQ1DNQ9H478 68 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 Q9H521 79 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 CD163L1Q9NR16 1453 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 C3P01024 1663 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 FREM2Q5SZK8 3169 aa-0.89□□□□□ -2.55
CD46-218ENST00000496723 BOD1L1Q8NFC6 3051 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 A0A087WXM4 84 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 MT1HL1P0DM35 61 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 MINOS1Q5TGZ0 78 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 V9GYS6 101 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 HFM1A2PYH4 1435 aa-0.9□□□□□ -2.55
CD46-218ENST00000496723 PVALEFA0A1B0GWK0 134 aa-0.91□□□□□ -2.56
CD46-218ENST00000496723 ATP5EP2Q5VTU8 51 aa-0.91□□□□□ -2.56
CD46-218ENST00000496723 SMARCA2P51531 1590 aa-0.91□□□□□ -2.56
CD46-218ENST00000496723 LMTK2Q8IWU2 1503 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 DCAF1Q9Y4B6 1507 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 KANTRA0A1W2PQU2 76 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 ENHOQ6UWT2 76 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 UBL5Q9BZL1 73 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 DIP2AQ14689 1571 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 CDC42BPGQ6DT37 1551 aa-0.92□□□□□ -2.56
CD46-218ENST00000496723 RALGAPBQ86X10 1494 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms