RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 Q96NJ1 140 aa4.73□□□□□ -1.65
ITGB1-217ENST00000494395 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
ITGB1-217ENST00000494395 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
ITGB1-217ENST00000494395 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
ITGB1-217ENST00000494395 A0A0U1RQV1 116 aa4.7□□□□□ -1.66
ITGB1-217ENST00000494395 A0A1B0GV72 72 aa4.7□□□□□ -1.66
ITGB1-217ENST00000494395 BAALC-AS2P0C853 105 aa4.7□□□□□ -1.66
ITGB1-217ENST00000494395 RPL37P61927 97 aaKnown RBP4.69□□□□□ -1.66
ITGB1-217ENST00000494395 ATXN8Q156A1 80 aa4.69□□□□□ -1.66
ITGB1-217ENST00000494395 BATFQ16520 125 aa4.69□□□□□ -1.66
ITGB1-217ENST00000494395 PCOTHQ58A44 107 aa4.69□□□□□ -1.66
ITGB1-217ENST00000494395 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
ITGB1-217ENST00000494395 CCKP06307 115 aa4.67□□□□□ -1.66
ITGB1-217ENST00000494395 RBM3P98179 157 aaKnown RBP4.67□□□□□ -1.66
ITGB1-217ENST00000494395 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
ITGB1-217ENST00000494395 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
ITGB1-217ENST00000494395 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
ITGB1-217ENST00000494395 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
ITGB1-217ENST00000494395 OBSCN-AS1Q96MR7 158 aa4.66□□□□□ -1.66
ITGB1-217ENST00000494395 DSCR8Q96T75 97 aa4.65□□□□□ -1.67
ITGB1-217ENST00000494395 LINC00472Q9H8W2 130 aa4.65□□□□□ -1.67
ITGB1-217ENST00000494395 A0A1W2PPM0 123 aa4.64□□□□□ -1.67
ITGB1-217ENST00000494395 Q6ZQT0 140 aa4.64□□□□□ -1.67
ITGB1-217ENST00000494395 LOC110117498A0A087WWA1 95 aa4.63□□□□□ -1.67
ITGB1-217ENST00000494395 C9JAW5 83 aa4.63□□□□□ -1.67
ITGB1-217ENST00000494395 JMJD7-PLA2G4BH0Y9G9 81 aa4.63□□□□□ -1.67
ITGB1-217ENST00000494395 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
ITGB1-217ENST00000494395 A8MUU9 505 aa4.62□□□□□ -1.67
ITGB1-217ENST00000494395 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
ITGB1-217ENST00000494395 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
ITGB1-217ENST00000494395 VPS25Q9BRG1 176 aa4.62□□□□□ -1.67
ITGB1-217ENST00000494395 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
ITGB1-217ENST00000494395 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
ITGB1-217ENST00000494395 H3BT86 120 aa4.6□□□□□ -1.67
ITGB1-217ENST00000494395 DSCR10P59022 87 aa4.6□□□□□ -1.67
ITGB1-217ENST00000494395 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
ITGB1-217ENST00000494395 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
ITGB1-217ENST00000494395 C14orf132Q9NPU4 83 aa4.6□□□□□ -1.67
ITGB1-217ENST00000494395 A0A1B0GW54 56 aa4.59□□□□□ -1.67
ITGB1-217ENST00000494395 PDE6GP18545 87 aa4.59□□□□□ -1.67
ITGB1-217ENST00000494395 MTURNQ8N3F0 131 aa4.59□□□□□ -1.67
ITGB1-217ENST00000494395 LINC00313P59037 77 aa4.58□□□□□ -1.68
ITGB1-217ENST00000494395 COL5A1-AS1Q5SY13 56 aa4.58□□□□□ -1.68
ITGB1-217ENST00000494395 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
ITGB1-217ENST00000494395 J3KT08 172 aa4.56□□□□□ -1.68
ITGB1-217ENST00000494395 ATP11AUNQ6ZP68 121 aa4.56□□□□□ -1.68
ITGB1-217ENST00000494395 SPCS1Q9Y6A9 102 aa4.56□□□□□ -1.68
ITGB1-217ENST00000494395 IGHV6-1A0A0B4J1U7 121 aa4.55□□□□□ -1.68
ITGB1-217ENST00000494395 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
ITGB1-217ENST00000494395 C8orf87E5RJ46 101 aa4.54□□□□□ -1.68
ITGB1-217ENST00000494395 MT1HP80294 61 aa4.54□□□□□ -1.68
ITGB1-217ENST00000494395 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
ITGB1-217ENST00000494395 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-217ENST00000494395 A8MWP4 228 aa4.52□□□□□ -1.69
ITGB1-217ENST00000494395 K7EP34 96 aa4.52□□□□□ -1.69
ITGB1-217ENST00000494395 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
ITGB1-217ENST00000494395 PCP4L1A6NKN8 68 aa4.51□□□□□ -1.69
ITGB1-217ENST00000494395 NREPQ16612 68 aa4.5□□□□□ -1.69
ITGB1-217ENST00000494395 C8orf17Q9NRJ1 99 aa4.5□□□□□ -1.69
ITGB1-217ENST00000494395 NDUFB1O75438 58 aa4.49□□□□□ -1.69
ITGB1-217ENST00000494395 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
ITGB1-217ENST00000494395 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
ITGB1-217ENST00000494395 K7EQZ3 153 aa4.46□□□□□ -1.7
ITGB1-217ENST00000494395 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
ITGB1-217ENST00000494395 Q6ZVQ6 151 aa4.46□□□□□ -1.7
ITGB1-217ENST00000494395 HRES1P13985 223 aa4.45□□□□□ -1.7
ITGB1-217ENST00000494395 GTF2H5Q6ZYL4 71 aa4.45□□□□□ -1.7
ITGB1-217ENST00000494395 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
ITGB1-217ENST00000494395 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-217ENST00000494395 LINC00846Q9NV44 126 aa4.44□□□□□ -1.7
ITGB1-217ENST00000494395 BPY2O14599 106 aa4.43□□□□□ -1.7
ITGB1-217ENST00000494395 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
ITGB1-217ENST00000494395 F8W1H4 67 aa4.42□□□□□ -1.7
ITGB1-217ENST00000494395 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
ITGB1-217ENST00000494395 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
ITGB1-217ENST00000494395 ETDBQ3ZM63 59 aa4.41□□□□□ -1.7
ITGB1-217ENST00000494395 Q8N9L7 120 aa4.4□□□□□ -1.71
ITGB1-217ENST00000494395 M0R2T5 61 aa4.38□□□□□ -1.71
ITGB1-217ENST00000494395 SPINK7P58062 85 aa4.38□□□□□ -1.71
ITGB1-217ENST00000494395 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
ITGB1-217ENST00000494395 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
ITGB1-217ENST00000494395 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
ITGB1-217ENST00000494395 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
ITGB1-217ENST00000494395 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
ITGB1-217ENST00000494395 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
ITGB1-217ENST00000494395 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
ITGB1-217ENST00000494395 Q5W150 140 aa4.34□□□□□ -1.71
ITGB1-217ENST00000494395 NDUFS5O43920 106 aa4.33□□□□□ -1.72
ITGB1-217ENST00000494395 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
ITGB1-217ENST00000494395 CXCL6P80162 114 aa4.32□□□□□ -1.72
ITGB1-217ENST00000494395 A0A1B0GV90 55 aa4.3□□□□□ -1.72
ITGB1-217ENST00000494395 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
ITGB1-217ENST00000494395 ACYP1P07311 99 aa4.29□□□□□ -1.72
ITGB1-217ENST00000494395 MT3P25713 68 aa4.29□□□□□ -1.72
ITGB1-217ENST00000494395 C7orf65Q6ZTY9 151 aa4.28□□□□□ -1.72
ITGB1-217ENST00000494395 MT2AP02795 61 aa4.26□□□□□ -1.73
ITGB1-217ENST00000494395 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
ITGB1-217ENST00000494395 MT1FP04733 61 aa4.24□□□□□ -1.73
ITGB1-217ENST00000494395 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
ITGB1-217ENST00000494395 TP53AIP1Q9HCN2 124 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms