RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
MCF2L-231ENST00000494043 DSCR10P59022 87 aa6.4□□□□□ -1.38
MCF2L-231ENST00000494043 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
MCF2L-231ENST00000494043 A8MWP4 228 aa6.39□□□□□ -1.39
MCF2L-231ENST00000494043 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
MCF2L-231ENST00000494043 HERC1Q15751 4861 aa6.37□□□□□ -1.39
MCF2L-231ENST00000494043 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
MCF2L-231ENST00000494043 K7EQZ3 153 aa6.36□□□□□ -1.39
MCF2L-231ENST00000494043 NDUFB1O75438 58 aa6.36□□□□□ -1.39
MCF2L-231ENST00000494043 Q8N9L7 120 aa6.36□□□□□ -1.39
MCF2L-231ENST00000494043 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
MCF2L-231ENST00000494043 IGLV7-46A0A075B6I9 117 aa6.34□□□□□ -1.39
MCF2L-231ENST00000494043 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
MCF2L-231ENST00000494043 MT-ATP8P03928 68 aa6.34□□□□□ -1.39
MCF2L-231ENST00000494043 PRR4Q16378 134 aa6.34□□□□□ -1.39
MCF2L-231ENST00000494043 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
MCF2L-231ENST00000494043 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
MCF2L-231ENST00000494043 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
MCF2L-231ENST00000494043 C8orf17Q9NRJ1 99 aa6.3□□□□□ -1.4
MCF2L-231ENST00000494043 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
MCF2L-231ENST00000494043 LINC00313P59037 77 aa6.29□□□□□ -1.4
MCF2L-231ENST00000494043 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
MCF2L-231ENST00000494043 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
MCF2L-231ENST00000494043 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
MCF2L-231ENST00000494043 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
MCF2L-231ENST00000494043 A0A087WVE0 104 aa6.27□□□□□ -1.41
MCF2L-231ENST00000494043 HCG22E2RYF7 251 aa6.27□□□□□ -1.41
MCF2L-231ENST00000494043 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
MCF2L-231ENST00000494043 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
MCF2L-231ENST00000494043 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
MCF2L-231ENST00000494043 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
MCF2L-231ENST00000494043 WFDC13Q8IUB5 93 aa6.24□□□□□ -1.41
MCF2L-231ENST00000494043 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
MCF2L-231ENST00000494043 XP32Q5T750 250 aa6.21□□□□□ -1.42
MCF2L-231ENST00000494043 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
MCF2L-231ENST00000494043 LPAP08519 4548 aa6.18□□□□□ -1.42
MCF2L-231ENST00000494043 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
MCF2L-231ENST00000494043 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
MCF2L-231ENST00000494043 A8MUU9 505 aa6.18□□□□□ -1.42
MCF2L-231ENST00000494043 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
MCF2L-231ENST00000494043 C20orf166-AS1Q96NR2 134 aa6.18□□□□□ -1.42
MCF2L-231ENST00000494043 Q75L30 129 aa6.16□□□□□ -1.42
MCF2L-231ENST00000494043 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
MCF2L-231ENST00000494043 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
MCF2L-231ENST00000494043 LRP2P98164 4655 aa6.15□□□□□ -1.43
MCF2L-231ENST00000494043 NDUFS5O43920 106 aa6.14□□□□□ -1.43
MCF2L-231ENST00000494043 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
MCF2L-231ENST00000494043 SCGB1A1P11684 91 aa6.13□□□□□ -1.43
MCF2L-231ENST00000494043 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
MCF2L-231ENST00000494043 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
MCF2L-231ENST00000494043 ATOX1O00244 68 aa6.09□□□□□ -1.43
MCF2L-231ENST00000494043 ZCCHC13Q8WW36 166 aaKnown RBP6.08□□□□□ -1.44
MCF2L-231ENST00000494043 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
MCF2L-231ENST00000494043 UQCRQO14949 82 aa6.07□□□□□ -1.44
MCF2L-231ENST00000494043 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
MCF2L-231ENST00000494043 SMIM20Q8N5G0 67 aa6.07□□□□□ -1.44
MCF2L-231ENST00000494043 Q5W150 140 aa6.06□□□□□ -1.44
MCF2L-231ENST00000494043 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
MCF2L-231ENST00000494043 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
MCF2L-231ENST00000494043 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
MCF2L-231ENST00000494043 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
MCF2L-231ENST00000494043 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
MCF2L-231ENST00000494043 H0Y9P7 68 aa6.01□□□□□ -1.45
MCF2L-231ENST00000494043 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
MCF2L-231ENST00000494043 C5orf47Q569G3 176 aa6□□□□□ -1.45
MCF2L-231ENST00000494043 MP68P56378 58 aa5.99□□□□□ -1.45
MCF2L-231ENST00000494043 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
MCF2L-231ENST00000494043 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
MCF2L-231ENST00000494043 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
MCF2L-231ENST00000494043 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
MCF2L-231ENST00000494043 H3BPC8 53 aa5.95□□□□□ -1.46
MCF2L-231ENST00000494043 COX7CP15954 63 aa5.95□□□□□ -1.46
MCF2L-231ENST00000494043 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
MCF2L-231ENST00000494043 SPINK7P58062 85 aa5.94□□□□□ -1.46
MCF2L-231ENST00000494043 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
MCF2L-231ENST00000494043 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
MCF2L-231ENST00000494043 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
MCF2L-231ENST00000494043 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
MCF2L-231ENST00000494043 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
MCF2L-231ENST00000494043 CYP4F30PQ9H0H9 118 aa5.91□□□□□ -1.46
MCF2L-231ENST00000494043 RNF213Q63HN8 5207 aa5.9□□□□□ -1.46
MCF2L-231ENST00000494043 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
MCF2L-231ENST00000494043 KLKP1Q107X0 134 aa5.87□□□□□ -1.47
MCF2L-231ENST00000494043 HRES1P13985 223 aa5.86□□□□□ -1.47
MCF2L-231ENST00000494043 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
MCF2L-231ENST00000494043 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
MCF2L-231ENST00000494043 MUC2Q02817 5179 aa5.81□□□□□ -1.48
MCF2L-231ENST00000494043 CYSTM1Q9H1C7 97 aa5.81□□□□□ -1.48
MCF2L-231ENST00000494043 C4orf26Q17RF5 130 aa5.8□□□□□ -1.48
MCF2L-231ENST00000494043 PCP4P48539 62 aa5.79□□□□□ -1.48
MCF2L-231ENST00000494043 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
MCF2L-231ENST00000494043 NDUFC1O43677 76 aa5.78□□□□□ -1.48
MCF2L-231ENST00000494043 H7BZZ5 65 aa5.76□□□□□ -1.49
MCF2L-231ENST00000494043 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
MCF2L-231ENST00000494043 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
MCF2L-231ENST00000494043 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
MCF2L-231ENST00000494043 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
MCF2L-231ENST00000494043 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
MCF2L-231ENST00000494043 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
MCF2L-231ENST00000494043 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms