RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MAST4O15021 2626 aa4□□□□□ -1.77
BRCA1-221ENST00000493795 DCHS1Q96JQ0 3298 aa4□□□□□ -1.77
BRCA1-221ENST00000493795 ITPR3Q14573 2671 aa4□□□□□ -1.77
BRCA1-221ENST00000493795 LOC400499M0QZD8 3231 aa3.99□□□□□ -1.77
BRCA1-221ENST00000493795 CENPEQ02224 2701 aa3.98□□□□□ -1.77
BRCA1-221ENST00000493795 RELNP78509 3460 aa3.97□□□□□ -1.77
BRCA1-221ENST00000493795 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
BRCA1-221ENST00000493795 CFAP46Q8IYW2 2715 aa3.95□□□□□ -1.78
BRCA1-221ENST00000493795 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
BRCA1-221ENST00000493795 FRYQ5TBA9 3013 aa3.93□□□□□ -1.78
BRCA1-221ENST00000493795 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
BRCA1-221ENST00000493795 KRTAP21-3Q3LHN1 58 aa3.91□□□□□ -1.78
BRCA1-221ENST00000493795 AKAP13Q12802 2813 aa3.9□□□□□ -1.79
BRCA1-221ENST00000493795 VPS13CQ709C8 3753 aa3.89□□□□□ -1.79
BRCA1-221ENST00000493795 SMG1Q96Q15 3661 aaKnown RBP3.89□□□□□ -1.79
BRCA1-221ENST00000493795 NBPF19A0A087WUL8 3843 aa3.89□□□□□ -1.79
BRCA1-221ENST00000493795 HELZ2Q9BYK8 2649 aaKnown RBP3.88□□□□□ -1.79
BRCA1-221ENST00000493795 DMXL1Q9Y485 3027 aa3.88□□□□□ -1.79
BRCA1-221ENST00000493795 INE1O15225 51 aa3.87□□□□□ -1.79
BRCA1-221ENST00000493795 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
BRCA1-221ENST00000493795 UNC79Q9P2D8 2635 aa3.84□□□□□ -1.8
BRCA1-221ENST00000493795 KRTAP12-1P59990 96 aa3.84□□□□□ -1.8
BRCA1-221ENST00000493795 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
BRCA1-221ENST00000493795 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
BRCA1-221ENST00000493795 A0A0C4DFX4 3053 aa3.8□□□□□ -1.8
BRCA1-221ENST00000493795 GCN1Q92616 2671 aaKnown RBP3.78□□□□□ -1.8
BRCA1-221ENST00000493795 TEX15Q9BXT5 2789 aa3.78□□□□□ -1.8
BRCA1-221ENST00000493795 CSMD1Q96PZ7 3565 aa3.76□□□□□ -1.81
BRCA1-221ENST00000493795 TEP1Q99973 2627 aaKnown RBP3.76□□□□□ -1.81
BRCA1-221ENST00000493795 CSMD2Q7Z408 3487 aa3.76□□□□□ -1.81
BRCA1-221ENST00000493795 KALRNO60229 2985 aa3.75□□□□□ -1.81
BRCA1-221ENST00000493795 IGSF10Q6WRI0 2623 aa3.75□□□□□ -1.81
BRCA1-221ENST00000493795 ATMQ13315 3056 aa3.74□□□□□ -1.81
BRCA1-221ENST00000493795 COL6A5A8TX70 2615 aa3.73□□□□□ -1.81
BRCA1-221ENST00000493795 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
BRCA1-221ENST00000493795 SETXQ7Z333 2677 aaKnown RBP3.72□□□□□ -1.81
BRCA1-221ENST00000493795 MGAQ8IWI9 3026 aa3.71□□□□□ -1.82
BRCA1-221ENST00000493795 NBEAQ8NFP9 2946 aa3.69□□□□□ -1.82
BRCA1-221ENST00000493795 ZZEF1O43149 2961 aa3.68□□□□□ -1.82
BRCA1-221ENST00000493795 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
BRCA1-221ENST00000493795 SVEP1Q4LDE5 3571 aa3.67□□□□□ -1.82
BRCA1-221ENST00000493795 NSD1Q96L73 2696 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-221ENST00000493795 ZNF292O60281 2723 aa3.66□□□□□ -1.82
BRCA1-221ENST00000493795 ZNF469Q96JG9 3925 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-221ENST00000493795 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
BRCA1-221ENST00000493795 CUBNO60494 3623 aa3.66□□□□□ -1.82
BRCA1-221ENST00000493795 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.82
BRCA1-221ENST00000493795 DCHS2Q6V1P9 2916 aa3.64□□□□□ -1.83
BRCA1-221ENST00000493795 MAP1AP78559 2803 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-221ENST00000493795 UBR5O95071 2799 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-221ENST00000493795 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
BRCA1-221ENST00000493795 BAHCC1Q9P281 2608 aa3.62□□□□□ -1.83
BRCA1-221ENST00000493795 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
BRCA1-221ENST00000493795 KMT2BQ9UMN6 2715 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-221ENST00000493795 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-221ENST00000493795 CRYBG3Q68DQ2 2970 aa3.56□□□□□ -1.84
BRCA1-221ENST00000493795 ITPR1Q14643 2758 aa3.55□□□□□ -1.84
BRCA1-221ENST00000493795 ITPR2Q14571 2701 aa3.54□□□□□ -1.84
BRCA1-221ENST00000493795 APCP25054 2843 aa3.53□□□□□ -1.84
BRCA1-221ENST00000493795 DSPP15924 2871 aaKnown RBP3.52□□□□□ -1.85
BRCA1-221ENST00000493795 CELSR2Q9HCU4 2923 aa3.52□□□□□ -1.85
BRCA1-221ENST00000493795 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
BRCA1-221ENST00000493795 ASH1LQ9NR48 2969 aaKnown RBP3.51□□□□□ -1.85
BRCA1-221ENST00000493795 CELSR1Q9NYQ6 3014 aa3.5□□□□□ -1.85
BRCA1-221ENST00000493795 FLNCQ14315 2725 aa3.48□□□□□ -1.85
BRCA1-221ENST00000493795 NIPBLQ6KC79 2804 aaeCLIP3.47□□□□□ -1.85
BRCA1-221ENST00000493795 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
BRCA1-221ENST00000493795 ADGRG4Q8IZF6 3080 aa3.47□□□□□ -1.85
BRCA1-221ENST00000493795 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.85
BRCA1-221ENST00000493795 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
BRCA1-221ENST00000493795 ANK2Q01484 3957 aa3.45□□□□□ -1.86
BRCA1-221ENST00000493795 COL12A1Q99715 3063 aa3.45□□□□□ -1.86
BRCA1-221ENST00000493795 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
BRCA1-221ENST00000493795 HIVEP1P15822 2718 aa3.44□□□□□ -1.86
BRCA1-221ENST00000493795 TGP01266 2768 aa3.44□□□□□ -1.86
BRCA1-221ENST00000493795 CSMD3Q7Z407 3707 aa3.43□□□□□ -1.86
BRCA1-221ENST00000493795 TACC2O95359 2948 aa3.42□□□□□ -1.86
BRCA1-221ENST00000493795 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
BRCA1-221ENST00000493795 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
BRCA1-221ENST00000493795 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.86
BRCA1-221ENST00000493795 TENM3Q9P273 2699 aa3.39□□□□□ -1.87
BRCA1-221ENST00000493795 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-221ENST00000493795 LRBAP50851 2863 aa3.36□□□□□ -1.87
BRCA1-221ENST00000493795 TRRAPQ9Y4A5 3859 aa3.36□□□□□ -1.87
BRCA1-221ENST00000493795 KRTAP3-3Q9BYR6 98 aa3.36□□□□□ -1.87
BRCA1-221ENST00000493795 TENM4Q6N022 2769 aa3.34□□□□□ -1.87
BRCA1-221ENST00000493795 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
BRCA1-221ENST00000493795 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
BRCA1-221ENST00000493795 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
BRCA1-221ENST00000493795 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
BRCA1-221ENST00000493795 LYSTQ99698 3801 aa3.29□□□□□ -1.88
BRCA1-221ENST00000493795 TENM1Q9UKZ4 2725 aa3.27□□□□□ -1.89
BRCA1-221ENST00000493795 FBN2P35556 2912 aa3.27□□□□□ -1.89
BRCA1-221ENST00000493795 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
BRCA1-221ENST00000493795 NF1P21359 2839 aa3.24□□□□□ -1.89
BRCA1-221ENST00000493795 LORP23490 312 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-221ENST00000493795 PDZD2O15018 2839 aa3.16□□□□□ -1.9
BRCA1-221ENST00000493795 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
BRCA1-221ENST00000493795 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
BRCA1-221ENST00000493795 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms