RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 RYR1P21817 5038 aa5.28□□□□□ -1.56
SMARCC1-208ENST00000492896 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
SMARCC1-208ENST00000492896 IGHV6-1A0A0B4J1U7 121 aa5.27□□□□□ -1.57
SMARCC1-208ENST00000492896 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
SMARCC1-208ENST00000492896 SPINK1P00995 79 aa5.27□□□□□ -1.57
SMARCC1-208ENST00000492896 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
SMARCC1-208ENST00000492896 Q5VSD8 79 aa5.26□□□□□ -1.57
SMARCC1-208ENST00000492896 SPAG11AQ6PDA7 123 aa5.26□□□□□ -1.57
SMARCC1-208ENST00000492896 C8orf87E5RJ46 101 aa5.25□□□□□ -1.57
SMARCC1-208ENST00000492896 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
SMARCC1-208ENST00000492896 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
SMARCC1-208ENST00000492896 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
SMARCC1-208ENST00000492896 TMEM254Q8TBM7 123 aa5.24□□□□□ -1.57
SMARCC1-208ENST00000492896 CYSTM1Q9H1C7 97 aa5.24□□□□□ -1.57
SMARCC1-208ENST00000492896 SNURFQ9Y675 71 aa5.23□□□□□ -1.57
SMARCC1-208ENST00000492896 A0A0U1RQV1 116 aa5.22□□□□□ -1.57
SMARCC1-208ENST00000492896 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
SMARCC1-208ENST00000492896 MRPL34Q9BQ48 92 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-208ENST00000492896 NDUFC1O43677 76 aa5.21□□□□□ -1.58
SMARCC1-208ENST00000492896 TMEM258P61165 79 aa5.21□□□□□ -1.58
SMARCC1-208ENST00000492896 MP68P56378 58 aa5.2□□□□□ -1.58
SMARCC1-208ENST00000492896 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
SMARCC1-208ENST00000492896 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
SMARCC1-208ENST00000492896 H0Y9P7 68 aa5.19□□□□□ -1.58
SMARCC1-208ENST00000492896 NDUFS5O43920 106 aa5.19□□□□□ -1.58
SMARCC1-208ENST00000492896 H7BZZ5 65 aa5.18□□□□□ -1.58
SMARCC1-208ENST00000492896 LINC00313P59037 77 aa5.18□□□□□ -1.58
SMARCC1-208ENST00000492896 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
SMARCC1-208ENST00000492896 H3BPC8 53 aa5.17□□□□□ -1.58
SMARCC1-208ENST00000492896 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-208ENST00000492896 Q8N1X5 172 aa5.16□□□□□ -1.58
SMARCC1-208ENST00000492896 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-208ENST00000492896 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
SMARCC1-208ENST00000492896 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
SMARCC1-208ENST00000492896 TNXBP22105 4242 aa5.15□□□□□ -1.58
SMARCC1-208ENST00000492896 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
SMARCC1-208ENST00000492896 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
SMARCC1-208ENST00000492896 LCE2BO14633 110 aa5.14□□□□□ -1.59
SMARCC1-208ENST00000492896 LINC00208Q96KT6 92 aa5.14□□□□□ -1.59
SMARCC1-208ENST00000492896 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
SMARCC1-208ENST00000492896 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
SMARCC1-208ENST00000492896 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
SMARCC1-208ENST00000492896 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-208ENST00000492896 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
SMARCC1-208ENST00000492896 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
SMARCC1-208ENST00000492896 FLG2Q5D862 2391 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-208ENST00000492896 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.6
SMARCC1-208ENST00000492896 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
SMARCC1-208ENST00000492896 RETNLBQ9BQ08 111 aa5.08□□□□□ -1.6
SMARCC1-208ENST00000492896 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
SMARCC1-208ENST00000492896 Q5W150 140 aa5.06□□□□□ -1.6
SMARCC1-208ENST00000492896 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 SPANXA2-OT1Q8N9U9 137 aa5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
SMARCC1-208ENST00000492896 OXTP01178 125 aa5.03□□□□□ -1.6
SMARCC1-208ENST00000492896 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
SMARCC1-208ENST00000492896 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
SMARCC1-208ENST00000492896 A8MUU9 505 aa5.01□□□□□ -1.61
SMARCC1-208ENST00000492896 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
SMARCC1-208ENST00000492896 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
SMARCC1-208ENST00000492896 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
SMARCC1-208ENST00000492896 PRR4Q16378 134 aa5□□□□□ -1.61
SMARCC1-208ENST00000492896 IGLV7-46A0A075B6I9 117 aa4.99□□□□□ -1.61
SMARCC1-208ENST00000492896 J3QL48 77 aa4.98□□□□□ -1.61
SMARCC1-208ENST00000492896 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
SMARCC1-208ENST00000492896 Q75L30 129 aa4.97□□□□□ -1.61
SMARCC1-208ENST00000492896 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
SMARCC1-208ENST00000492896 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
SMARCC1-208ENST00000492896 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
SMARCC1-208ENST00000492896 C7orf65Q6ZTY9 151 aa4.95□□□□□ -1.62
SMARCC1-208ENST00000492896 HERC2O95714 4834 aa4.95□□□□□ -1.62
SMARCC1-208ENST00000492896 HRES1P13985 223 aa4.94□□□□□ -1.62
SMARCC1-208ENST00000492896 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
SMARCC1-208ENST00000492896 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
SMARCC1-208ENST00000492896 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
SMARCC1-208ENST00000492896 XP32Q5T750 250 aa4.9□□□□□ -1.63
SMARCC1-208ENST00000492896 COA5Q86WW8 74 aa4.9□□□□□ -1.63
SMARCC1-208ENST00000492896 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
SMARCC1-208ENST00000492896 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
SMARCC1-208ENST00000492896 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
SMARCC1-208ENST00000492896 ACYP2P14621 99 aa4.86□□□□□ -1.63
SMARCC1-208ENST00000492896 SPINK7P58062 85 aa4.85□□□□□ -1.63
SMARCC1-208ENST00000492896 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
SMARCC1-208ENST00000492896 A8MUN3 132 aa4.82□□□□□ -1.64
SMARCC1-208ENST00000492896 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
SMARCC1-208ENST00000492896 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
SMARCC1-208ENST00000492896 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
SMARCC1-208ENST00000492896 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
SMARCC1-208ENST00000492896 Q1T7F1 81 aa4.79□□□□□ -1.64
SMARCC1-208ENST00000492896 V9GYY9 64 aa4.79□□□□□ -1.64
SMARCC1-208ENST00000492896 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
SMARCC1-208ENST00000492896 LPAP08519 4548 aa4.73□□□□□ -1.65
SMARCC1-208ENST00000492896 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
SMARCC1-208ENST00000492896 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
SMARCC1-208ENST00000492896 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
SMARCC1-208ENST00000492896 LRP2P98164 4655 aa4.72□□□□□ -1.65
SMARCC1-208ENST00000492896 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms