RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ANAPC11Q9NYG5 84 aa5.29□□□□□ -1.56
HDAC3-212ENST00000492407 IGKV2-28A0A075B6P5 120 aa5.28□□□□□ -1.56
HDAC3-212ENST00000492407 TRBV7-4A0A0J9YYF1 115 aa5.28□□□□□ -1.56
HDAC3-212ENST00000492407 IGKV2D-28P01615 120 aa5.28□□□□□ -1.56
HDAC3-212ENST00000492407 Q5VV11 94 aa5.28□□□□□ -1.56
HDAC3-212ENST00000492407 SND1-IT1Q9HBX3 110 aa5.28□□□□□ -1.56
HDAC3-212ENST00000492407 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
HDAC3-212ENST00000492407 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
HDAC3-212ENST00000492407 LEPROTO15243 131 aa5.27□□□□□ -1.57
HDAC3-212ENST00000492407 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
HDAC3-212ENST00000492407 A0A087WVE0 104 aa5.26□□□□□ -1.57
HDAC3-212ENST00000492407 PRLHP81277 87 aa5.26□□□□□ -1.57
HDAC3-212ENST00000492407 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
HDAC3-212ENST00000492407 BAALC-AS2P0C853 105 aa5.24□□□□□ -1.57
HDAC3-212ENST00000492407 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
HDAC3-212ENST00000492407 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-212ENST00000492407 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
HDAC3-212ENST00000492407 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
HDAC3-212ENST00000492407 A0A0J9YXY3 114 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 TMEM254Q8TBM7 123 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
HDAC3-212ENST00000492407 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 SPINK1P00995 79 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 SPRR1AP35321 89 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 LINC00158P58513 81 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 Q8NDZ9 215 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 HIGD2AQ9BW72 106 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
HDAC3-212ENST00000492407 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
HDAC3-212ENST00000492407 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
HDAC3-212ENST00000492407 FAM218AQ96MZ4 157 aa5.2□□□□□ -1.58
HDAC3-212ENST00000492407 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
HDAC3-212ENST00000492407 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
HDAC3-212ENST00000492407 UBL5Q9BZL1 73 aa5.19□□□□□ -1.58
HDAC3-212ENST00000492407 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-212ENST00000492407 MOBPQ13875 183 aa5.18□□□□□ -1.58
HDAC3-212ENST00000492407 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
HDAC3-212ENST00000492407 LINC00483Q53H64 154 aa5.18□□□□□ -1.58
HDAC3-212ENST00000492407 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
HDAC3-212ENST00000492407 ETDCA0A1B0GVM5 59 aa5.17□□□□□ -1.58
HDAC3-212ENST00000492407 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-212ENST00000492407 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
HDAC3-212ENST00000492407 SSBP3-AS1Q7Z2R9 100 aa5.17□□□□□ -1.58
HDAC3-212ENST00000492407 Q8NBF4 154 aa5.17□□□□□ -1.58
HDAC3-212ENST00000492407 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
HDAC3-212ENST00000492407 H7C2G1 150 aa5.16□□□□□ -1.58
HDAC3-212ENST00000492407 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
HDAC3-212ENST00000492407 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
HDAC3-212ENST00000492407 MIR7-3HGQ8N6C7 128 aa5.15□□□□□ -1.59
HDAC3-212ENST00000492407 TSPEAR-AS2P59090 65 aa5.14□□□□□ -1.59
HDAC3-212ENST00000492407 NREPQ16612 68 aa5.14□□□□□ -1.59
HDAC3-212ENST00000492407 A6NED7 52 aa5.13□□□□□ -1.59
HDAC3-212ENST00000492407 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
HDAC3-212ENST00000492407 NCR3O14931 201 aa5.12□□□□□ -1.59
HDAC3-212ENST00000492407 NDUFB1O75438 58 aa5.12□□□□□ -1.59
HDAC3-212ENST00000492407 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-212ENST00000492407 Q9BRP9 147 aa5.12□□□□□ -1.59
HDAC3-212ENST00000492407 H0YGX0 51 aa5.11□□□□□ -1.59
HDAC3-212ENST00000492407 Q8N377 158 aa5.11□□□□□ -1.59
HDAC3-212ENST00000492407 XP32Q5T750 250 aa5.1□□□□□ -1.59
HDAC3-212ENST00000492407 Q6ZRX8 168 aa5.1□□□□□ -1.59
HDAC3-212ENST00000492407 IGLV6-57P01721 117 aa5.09□□□□□ -1.59
HDAC3-212ENST00000492407 PDE6GP18545 87 aa5.08□□□□□ -1.6
HDAC3-212ENST00000492407 ROMO1P60602 79 aa5.08□□□□□ -1.6
HDAC3-212ENST00000492407 A8MU10 97 aa5.07□□□□□ -1.6
HDAC3-212ENST00000492407 LITAFQ99732 161 aa5.07□□□□□ -1.6
HDAC3-212ENST00000492407 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
HDAC3-212ENST00000492407 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
HDAC3-212ENST00000492407 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
HDAC3-212ENST00000492407 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
HDAC3-212ENST00000492407 H3BQ85 93 aa5.05□□□□□ -1.6
HDAC3-212ENST00000492407 SPRR1BP22528 89 aa5.05□□□□□ -1.6
HDAC3-212ENST00000492407 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
HDAC3-212ENST00000492407 BPY2O14599 106 aa5.04□□□□□ -1.6
HDAC3-212ENST00000492407 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
HDAC3-212ENST00000492407 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
HDAC3-212ENST00000492407 LOC110117498A0A087WWA1 95 aa5.02□□□□□ -1.61
HDAC3-212ENST00000492407 ORMDL1Q9P0S3 153 aa5.02□□□□□ -1.61
HDAC3-212ENST00000492407 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
HDAC3-212ENST00000492407 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
HDAC3-212ENST00000492407 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
HDAC3-212ENST00000492407 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
HDAC3-212ENST00000492407 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
HDAC3-212ENST00000492407 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
HDAC3-212ENST00000492407 A0A087WSZ3 146 aa4.99□□□□□ -1.61
HDAC3-212ENST00000492407 K7ERS5 55 aa4.99□□□□□ -1.61
HDAC3-212ENST00000492407 LINC00308Q8TCZ7 52 aa4.98□□□□□ -1.61
HDAC3-212ENST00000492407 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
HDAC3-212ENST00000492407 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
HDAC3-212ENST00000492407 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
HDAC3-212ENST00000492407 PCOTHQ58A44 107 aa4.96□□□□□ -1.62
HDAC3-212ENST00000492407 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
HDAC3-212ENST00000492407 COX7BP24311 80 aa4.95□□□□□ -1.62
HDAC3-212ENST00000492407 MT1HP80294 61 aa4.95□□□□□ -1.62
HDAC3-212ENST00000492407 H3BPC8 53 aa4.94□□□□□ -1.62
HDAC3-212ENST00000492407 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms