RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 K7ERU9 68 aa7.62□□□□□ -1.19
CDK9-204ENST00000491521 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
CDK9-204ENST00000491521 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
CDK9-204ENST00000491521 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
CDK9-204ENST00000491521 Q96NJ1 140 aa7.6□□□□□ -1.19
CDK9-204ENST00000491521 SIGMAR1Q99720 223 aa7.6□□□□□ -1.19
CDK9-204ENST00000491521 J3KT08 172 aa7.59□□□□□ -1.19
CDK9-204ENST00000491521 BPY2O14599 106 aa7.59□□□□□ -1.19
CDK9-204ENST00000491521 NDUFB1O75438 58 aa7.54□□□□□ -1.2
CDK9-204ENST00000491521 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
CDK9-204ENST00000491521 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
CDK9-204ENST00000491521 A8MWP4 228 aa7.51□□□□□ -1.21
CDK9-204ENST00000491521 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
CDK9-204ENST00000491521 DSCR10P59022 87 aa7.5□□□□□ -1.21
CDK9-204ENST00000491521 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
CDK9-204ENST00000491521 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
CDK9-204ENST00000491521 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
CDK9-204ENST00000491521 CXCL6P80162 114 aa7.49□□□□□ -1.21
CDK9-204ENST00000491521 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
CDK9-204ENST00000491521 Q8N9L7 120 aa7.48□□□□□ -1.21
CDK9-204ENST00000491521 K7EQZ3 153 aa7.47□□□□□ -1.21
CDK9-204ENST00000491521 XP32Q5T750 250 aa7.47□□□□□ -1.21
CDK9-204ENST00000491521 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
CDK9-204ENST00000491521 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
CDK9-204ENST00000491521 KRTAP4-1Q9BYQ7 146 aa7.47□□□□□ -1.21
CDK9-204ENST00000491521 LINC00313P59037 77 aa7.46□□□□□ -1.22
CDK9-204ENST00000491521 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
CDK9-204ENST00000491521 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
CDK9-204ENST00000491521 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
CDK9-204ENST00000491521 C8orf17Q9NRJ1 99 aa7.42□□□□□ -1.22
CDK9-204ENST00000491521 WFDC13Q8IUB5 93 aa7.38□□□□□ -1.23
CDK9-204ENST00000491521 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
CDK9-204ENST00000491521 MT-ATP8P03928 68 aa7.37□□□□□ -1.23
CDK9-204ENST00000491521 PCOTHQ58A44 107 aa7.37□□□□□ -1.23
CDK9-204ENST00000491521 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
CDK9-204ENST00000491521 CASC2Q6XLA1 102 aa7.36□□□□□ -1.23
CDK9-204ENST00000491521 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
CDK9-204ENST00000491521 A0A087WVE0 104 aa7.34□□□□□ -1.23
CDK9-204ENST00000491521 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
CDK9-204ENST00000491521 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
CDK9-204ENST00000491521 MRPL34Q9BQ48 92 aaKnown RBP7.33□□□□□ -1.24
CDK9-204ENST00000491521 NDUFS5O43920 106 aa7.32□□□□□ -1.24
CDK9-204ENST00000491521 IMUPQ9GZP8 106 aa7.31□□□□□ -1.24
CDK9-204ENST00000491521 A8MUU9 505 aa7.28□□□□□ -1.24
CDK9-204ENST00000491521 Q75L30 129 aa7.28□□□□□ -1.24
CDK9-204ENST00000491521 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
CDK9-204ENST00000491521 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
CDK9-204ENST00000491521 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
CDK9-204ENST00000491521 Q8N9P0 234 aaPredicted RBP7.26□□□□□ -1.25
CDK9-204ENST00000491521 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
CDK9-204ENST00000491521 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
CDK9-204ENST00000491521 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
CDK9-204ENST00000491521 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
CDK9-204ENST00000491521 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
CDK9-204ENST00000491521 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
CDK9-204ENST00000491521 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
CDK9-204ENST00000491521 MT1HP80294 61 aa7.18□□□□□ -1.26
CDK9-204ENST00000491521 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
CDK9-204ENST00000491521 UQCRQO14949 82 aa7.13□□□□□ -1.27
CDK9-204ENST00000491521 Q5W150 140 aa7.13□□□□□ -1.27
CDK9-204ENST00000491521 M0R2T5 61 aa7.12□□□□□ -1.27
CDK9-204ENST00000491521 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
CDK9-204ENST00000491521 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
CDK9-204ENST00000491521 ATOX1O00244 68 aa7.1□□□□□ -1.27
CDK9-204ENST00000491521 SMIM20Q8N5G0 67 aa7.1□□□□□ -1.27
CDK9-204ENST00000491521 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
CDK9-204ENST00000491521 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
CDK9-204ENST00000491521 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
CDK9-204ENST00000491521 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
CDK9-204ENST00000491521 H0Y9P7 68 aa7.07□□□□□ -1.28
CDK9-204ENST00000491521 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
CDK9-204ENST00000491521 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
CDK9-204ENST00000491521 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
CDK9-204ENST00000491521 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
CDK9-204ENST00000491521 MP68P56378 58 aa7.05□□□□□ -1.28
CDK9-204ENST00000491521 C5orf47Q569G3 176 aa7.05□□□□□ -1.28
CDK9-204ENST00000491521 SPINK7P58062 85 aa7.04□□□□□ -1.28
CDK9-204ENST00000491521 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
CDK9-204ENST00000491521 LINC00208Q96KT6 92 aa7.02□□□□□ -1.29
CDK9-204ENST00000491521 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
CDK9-204ENST00000491521 SERP2Q8N6R1 65 aa7□□□□□ -1.29
CDK9-204ENST00000491521 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
CDK9-204ENST00000491521 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
CDK9-204ENST00000491521 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
CDK9-204ENST00000491521 H3BPC8 53 aa6.96□□□□□ -1.3
CDK9-204ENST00000491521 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.3
CDK9-204ENST00000491521 COX7CP15954 63 aa6.92□□□□□ -1.3
CDK9-204ENST00000491521 HRES1P13985 223 aa6.91□□□□□ -1.3
CDK9-204ENST00000491521 C20orf197Q8N268 126 aa6.91□□□□□ -1.3
CDK9-204ENST00000491521 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
CDK9-204ENST00000491521 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
CDK9-204ENST00000491521 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
CDK9-204ENST00000491521 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
CDK9-204ENST00000491521 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
CDK9-204ENST00000491521 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
CDK9-204ENST00000491521 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
CDK9-204ENST00000491521 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
CDK9-204ENST00000491521 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
CDK9-204ENST00000491521 USH2AO75445 5202 aa6.78□□□□□ -1.32
CDK9-204ENST00000491521 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms