RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TEN1Q86WV5 123 aa3.01□□□□□ -1.93
PDLIM1-203ENST00000490391 H0Y8G0 127 aa3□□□□□ -1.93
PDLIM1-203ENST00000490391 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
PDLIM1-203ENST00000490391 IGKV4-1P06312 121 aa2.99□□□□□ -1.93
PDLIM1-203ENST00000490391 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
PDLIM1-203ENST00000490391 SMIM11BQ8TCY0 68 aa2.99□□□□□ -1.93
PDLIM1-203ENST00000490391 IGHV6-1A0A0B4J1U7 121 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 A6NDN8 102 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 E9PLD3 99 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 DPM2O94777 84 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 MT1XP80297 61 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
PDLIM1-203ENST00000490391 hADV29S1A0JD25 119 aa2.97□□□□□ -1.93
PDLIM1-203ENST00000490391 S100PP25815 95 aa2.97□□□□□ -1.93
PDLIM1-203ENST00000490391 PPDPFLQ8WWR9 84 aa2.97□□□□□ -1.93
PDLIM1-203ENST00000490391 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
PDLIM1-203ENST00000490391 IGKCP01834 107 aa2.96□□□□□ -1.94
PDLIM1-203ENST00000490391 TRAPPC1Q9Y5R8 145 aa2.96□□□□□ -1.94
PDLIM1-203ENST00000490391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.95□□□□□ -1.94
PDLIM1-203ENST00000490391 SNHG12Q9BXW3 62 aa2.95□□□□□ -1.94
PDLIM1-203ENST00000490391 C3orf79P0CE67 100 aa2.94□□□□□ -1.94
PDLIM1-203ENST00000490391 DEFB116Q30KQ4 102 aa2.94□□□□□ -1.94
PDLIM1-203ENST00000490391 TTTY13Q9BZ97 58 aa2.94□□□□□ -1.94
PDLIM1-203ENST00000490391 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
PDLIM1-203ENST00000490391 KLKP1Q107X0 134 aa2.93□□□□□ -1.94
PDLIM1-203ENST00000490391 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
PDLIM1-203ENST00000490391 C8orf87E5RJ46 101 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 HSBP1O75506 76 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 LEPROTL1O95214 131 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 VAMP3Q15836 100 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 C5orf47Q569G3 176 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
PDLIM1-203ENST00000490391 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
PDLIM1-203ENST00000490391 IFITM1P13164 125 aa2.91□□□□□ -1.94
PDLIM1-203ENST00000490391 RAB37Q96AX2 223 aa2.91□□□□□ -1.94
PDLIM1-203ENST00000490391 HSPB8Q9UJY1 196 aa2.91□□□□□ -1.94
PDLIM1-203ENST00000490391 NDUFV3P56181 108 aaKnown RBP2.89□□□□□ -1.95
PDLIM1-203ENST00000490391 MUSTN1Q8IVN3 82 aa2.89□□□□□ -1.95
PDLIM1-203ENST00000490391 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
PDLIM1-203ENST00000490391 IGKV3D-7A0A0C4DH55 119 aa2.88□□□□□ -1.95
PDLIM1-203ENST00000490391 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
PDLIM1-203ENST00000490391 MT4P47944 62 aa2.88□□□□□ -1.95
PDLIM1-203ENST00000490391 COPS9Q8WXC6 57 aa2.88□□□□□ -1.95
PDLIM1-203ENST00000490391 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
PDLIM1-203ENST00000490391 TRBV7-4A0A0J9YYF1 115 aa2.86□□□□□ -1.95
PDLIM1-203ENST00000490391 H3BMG7 143 aa2.86□□□□□ -1.95
PDLIM1-203ENST00000490391 FABP4P15090 132 aa2.86□□□□□ -1.95
PDLIM1-203ENST00000490391 DSCR8Q96T75 97 aa2.86□□□□□ -1.95
PDLIM1-203ENST00000490391 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
PDLIM1-203ENST00000490391 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
PDLIM1-203ENST00000490391 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
PDLIM1-203ENST00000490391 SCGB1D4Q6XE38 83 aa2.84□□□□□ -1.95
PDLIM1-203ENST00000490391 Q6ZVQ6 151 aa2.84□□□□□ -1.95
PDLIM1-203ENST00000490391 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
PDLIM1-203ENST00000490391 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
PDLIM1-203ENST00000490391 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
PDLIM1-203ENST00000490391 LCA10Q71F78 164 aa2.83□□□□□ -1.96
PDLIM1-203ENST00000490391 C12orf57Q99622 126 aa2.83□□□□□ -1.96
PDLIM1-203ENST00000490391 TRGC2P03986 189 aa2.82□□□□□ -1.96
PDLIM1-203ENST00000490391 UQCC3Q6UW78 93 aa2.82□□□□□ -1.96
PDLIM1-203ENST00000490391 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
PDLIM1-203ENST00000490391 BVES-AS1Q5T3Y7 98 aa2.81□□□□□ -1.96
PDLIM1-203ENST00000490391 YPEL4Q96NS1 127 aa2.81□□□□□ -1.96
PDLIM1-203ENST00000490391 S4R3F8 94 aa2.81□□□□□ -1.96
PDLIM1-203ENST00000490391 SYS1-DBNDD2H3BUS1 97 aa2.8□□□□□ -1.96
PDLIM1-203ENST00000490391 C4orf26Q17RF5 130 aa2.8□□□□□ -1.96
PDLIM1-203ENST00000490391 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
PDLIM1-203ENST00000490391 C8orf17Q9NRJ1 99 aa2.79□□□□□ -1.96
PDLIM1-203ENST00000490391 RBM3P98179 157 aaKnown RBP2.78□□□□□ -1.96
PDLIM1-203ENST00000490391 CLLU1Q5K131 121 aa2.78□□□□□ -1.96
PDLIM1-203ENST00000490391 ANKRD29Q8N6D5 301 aa2.78□□□□□ -1.96
PDLIM1-203ENST00000490391 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 TRACP01848 142 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 CCKP06307 115 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 FABP2P12104 132 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 C7orf65Q6ZTY9 151 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 C2orf91Q6ZV80 131 aa2.77□□□□□ -1.97
PDLIM1-203ENST00000490391 A0A1B0GV72 72 aa2.75□□□□□ -1.97
PDLIM1-203ENST00000490391 J3KT08 172 aa2.75□□□□□ -1.97
PDLIM1-203ENST00000490391 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
PDLIM1-203ENST00000490391 Q5W150 140 aa2.74□□□□□ -1.97
PDLIM1-203ENST00000490391 NDUFB1O75438 58 aa2.73□□□□□ -1.97
PDLIM1-203ENST00000490391 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
PDLIM1-203ENST00000490391 H0YGX0 51 aa2.72□□□□□ -1.97
PDLIM1-203ENST00000490391 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
PDLIM1-203ENST00000490391 A8MUN3 132 aa2.71□□□□□ -1.98
PDLIM1-203ENST00000490391 SNCGO76070 127 aa2.71□□□□□ -1.98
PDLIM1-203ENST00000490391 MRPL34Q9BQ48 92 aaKnown RBP2.71□□□□□ -1.98
PDLIM1-203ENST00000490391 OCR1Q9BZK8 76 aa2.71□□□□□ -1.98
PDLIM1-203ENST00000490391 MMP24-AS1A0A0U1RRL7 71 aa2.7□□□□□ -1.98
PDLIM1-203ENST00000490391 A0A1B0GX51 115 aa2.7□□□□□ -1.98
PDLIM1-203ENST00000490391 K7EQZ3 153 aa2.7□□□□□ -1.98
PDLIM1-203ENST00000490391 TMEM254Q8TBM7 123 aa2.7□□□□□ -1.98
PDLIM1-203ENST00000490391 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
PDLIM1-203ENST00000490391 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
PDLIM1-203ENST00000490391 VPS25Q9BRG1 176 aa2.68□□□□□ -1.98
PDLIM1-203ENST00000490391 APOC3P02656 99 aa2.67□□□□□ -1.98
PDLIM1-203ENST00000490391 Q6ZQT0 140 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms