RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C1orf195Q5TG92 126 aa5.27□□□□□ -1.57
TMEM39A-210ENST00000490099 MTURNQ8N3F0 131 aa5.27□□□□□ -1.57
TMEM39A-210ENST00000490099 A0A0G2JQZ4 141 aa5.25□□□□□ -1.57
TMEM39A-210ENST00000490099 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
TMEM39A-210ENST00000490099 RBM3P98179 157 aaKnown RBP5.24□□□□□ -1.57
TMEM39A-210ENST00000490099 Q6JHZ5 121 aa5.24□□□□□ -1.57
TMEM39A-210ENST00000490099 TEN1Q86WV5 123 aa5.24□□□□□ -1.57
TMEM39A-210ENST00000490099 DSCR8Q96T75 97 aa5.24□□□□□ -1.57
TMEM39A-210ENST00000490099 PDE6GP18545 87 aa5.23□□□□□ -1.57
TMEM39A-210ENST00000490099 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
TMEM39A-210ENST00000490099 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
TMEM39A-210ENST00000490099 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
TMEM39A-210ENST00000490099 OBSCN-AS1Q96MR7 158 aa5.22□□□□□ -1.57
TMEM39A-210ENST00000490099 ETDBQ3ZM63 59 aa5.21□□□□□ -1.58
TMEM39A-210ENST00000490099 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
TMEM39A-210ENST00000490099 TRBV7-4A0A0J9YYF1 115 aa5.2□□□□□ -1.58
TMEM39A-210ENST00000490099 A0A1B0GV72 72 aa5.2□□□□□ -1.58
TMEM39A-210ENST00000490099 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-210ENST00000490099 MT1HP80294 61 aa5.19□□□□□ -1.58
TMEM39A-210ENST00000490099 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
TMEM39A-210ENST00000490099 C14orf132Q9NPU4 83 aa5.19□□□□□ -1.58
TMEM39A-210ENST00000490099 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
TMEM39A-210ENST00000490099 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
TMEM39A-210ENST00000490099 A0A1B0GW54 56 aa5.17□□□□□ -1.58
TMEM39A-210ENST00000490099 Q6ZQT0 140 aa5.17□□□□□ -1.58
TMEM39A-210ENST00000490099 J3QR89 54 aa5.16□□□□□ -1.58
TMEM39A-210ENST00000490099 CCKP06307 115 aa5.16□□□□□ -1.58
TMEM39A-210ENST00000490099 Q6Q795 121 aa5.16□□□□□ -1.58
TMEM39A-210ENST00000490099 VPS25Q9BRG1 176 aa5.15□□□□□ -1.59
TMEM39A-210ENST00000490099 ACYP1P07311 99 aa5.13□□□□□ -1.59
TMEM39A-210ENST00000490099 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
TMEM39A-210ENST00000490099 SS18L2Q9UHA2 77 aa5.13□□□□□ -1.59
TMEM39A-210ENST00000490099 FAM240AA0A1B0GVK7 77 aa5.12□□□□□ -1.59
TMEM39A-210ENST00000490099 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
TMEM39A-210ENST00000490099 K7ERU9 68 aa5.11□□□□□ -1.59
TMEM39A-210ENST00000490099 Q75L30 129 aa5.11□□□□□ -1.59
TMEM39A-210ENST00000490099 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
TMEM39A-210ENST00000490099 A0A087WSZ3 146 aa5.09□□□□□ -1.59
TMEM39A-210ENST00000490099 UBL5Q9BZL1 73 aa5.08□□□□□ -1.6
TMEM39A-210ENST00000490099 NREPQ16612 68 aa5.06□□□□□ -1.6
TMEM39A-210ENST00000490099 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
TMEM39A-210ENST00000490099 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
TMEM39A-210ENST00000490099 Q96NJ1 140 aa5.05□□□□□ -1.6
TMEM39A-210ENST00000490099 LINC00846Q9NV44 126 aa5.05□□□□□ -1.6
TMEM39A-210ENST00000490099 A8MUU9 505 aa5.04□□□□□ -1.6
TMEM39A-210ENST00000490099 J3KT08 172 aa5.04□□□□□ -1.6
TMEM39A-210ENST00000490099 ATP11AUNQ6ZP68 121 aa5.04□□□□□ -1.6
TMEM39A-210ENST00000490099 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-210ENST00000490099 Q6ZVQ6 151 aa5.03□□□□□ -1.6
TMEM39A-210ENST00000490099 ATP5EP2Q5VTU8 51 aa5.02□□□□□ -1.61
TMEM39A-210ENST00000490099 COX6B2Q6YFQ2 88 aa5.02□□□□□ -1.61
TMEM39A-210ENST00000490099 SIGMAR1Q99720 223 aa5.01□□□□□ -1.61
TMEM39A-210ENST00000490099 BPY2O14599 106 aa5□□□□□ -1.61
TMEM39A-210ENST00000490099 LINC00643Q86TS7 51 aa5□□□□□ -1.61
TMEM39A-210ENST00000490099 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
TMEM39A-210ENST00000490099 M0R2T5 61 aa4.99□□□□□ -1.61
TMEM39A-210ENST00000490099 IGKV4-1P06312 121 aa4.99□□□□□ -1.61
TMEM39A-210ENST00000490099 CXCL6P80162 114 aa4.99□□□□□ -1.61
TMEM39A-210ENST00000490099 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
TMEM39A-210ENST00000490099 NDUFB1O75438 58 aa4.98□□□□□ -1.61
TMEM39A-210ENST00000490099 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
TMEM39A-210ENST00000490099 A8MWP4 228 aa4.96□□□□□ -1.62
TMEM39A-210ENST00000490099 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
TMEM39A-210ENST00000490099 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
TMEM39A-210ENST00000490099 DSCR10P59022 87 aa4.95□□□□□ -1.62
TMEM39A-210ENST00000490099 LINC00313P59037 77 aa4.94□□□□□ -1.62
TMEM39A-210ENST00000490099 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
TMEM39A-210ENST00000490099 IGKV3D-7A0A0C4DH55 119 aa4.93□□□□□ -1.62
TMEM39A-210ENST00000490099 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
TMEM39A-210ENST00000490099 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
TMEM39A-210ENST00000490099 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
TMEM39A-210ENST00000490099 C8orf87E5RJ46 101 aa4.92□□□□□ -1.62
TMEM39A-210ENST00000490099 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
TMEM39A-210ENST00000490099 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
TMEM39A-210ENST00000490099 K7EQZ3 153 aa4.91□□□□□ -1.62
TMEM39A-210ENST00000490099 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
TMEM39A-210ENST00000490099 HIST1H4AP62805 103 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-210ENST00000490099 Q8N9L7 120 aa4.89□□□□□ -1.63
TMEM39A-210ENST00000490099 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
TMEM39A-210ENST00000490099 HRES1P13985 223 aa4.88□□□□□ -1.63
TMEM39A-210ENST00000490099 C8orf17Q9NRJ1 99 aa4.88□□□□□ -1.63
TMEM39A-210ENST00000490099 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
TMEM39A-210ENST00000490099 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
TMEM39A-210ENST00000490099 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
TMEM39A-210ENST00000490099 hDV103S1A0JD37 113 aa4.85□□□□□ -1.63
TMEM39A-210ENST00000490099 CASC2Q6XLA1 102 aa4.85□□□□□ -1.63
TMEM39A-210ENST00000490099 TMEM254Q8TBM7 123 aa4.85□□□□□ -1.63
TMEM39A-210ENST00000490099 MT2AP02795 61 aa4.83□□□□□ -1.64
TMEM39A-210ENST00000490099 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
TMEM39A-210ENST00000490099 A0A087WVE0 104 aa4.82□□□□□ -1.64
TMEM39A-210ENST00000490099 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-210ENST00000490099 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-210ENST00000490099 USH2AO75445 5202 aa4.8□□□□□ -1.64
TMEM39A-210ENST00000490099 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-210ENST00000490099 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
TMEM39A-210ENST00000490099 FAM236AA0A1B0GUQ0 79 aa4.79□□□□□ -1.64
TMEM39A-210ENST00000490099 FAM236BA0A1B0GV22 79 aa4.79□□□□□ -1.64
TMEM39A-210ENST00000490099 NDUFS5O43920 106 aa4.79□□□□□ -1.64
TMEM39A-210ENST00000490099 MT1FP04733 61 aa4.79□□□□□ -1.64
TMEM39A-210ENST00000490099 SCGB1A1P11684 91 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms