RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 A8MWP4 228 aa11.84□□□□□ -0.51
SND1-214ENST00000489417 K7EQZ3 153 aa11.83□□□□□ -0.52
SND1-214ENST00000489417 NDUFB1O75438 58 aa11.8□□□□□ -0.52
SND1-214ENST00000489417 PRR15Q8IV56 129 aa11.78□□□□□ -0.52
SND1-214ENST00000489417 A0A087WVE0 104 aa11.77□□□□□ -0.52
SND1-214ENST00000489417 A0A1B0GVX0 72 aa11.76□□□□□ -0.53
SND1-214ENST00000489417 RETNLBQ9BQ08 111 aa11.75□□□□□ -0.53
SND1-214ENST00000489417 J3QL48 77 aa11.74□□□□□ -0.53
SND1-214ENST00000489417 IGHV6-1A0A0B4J1U7 121 aa11.73□□□□□ -0.53
SND1-214ENST00000489417 C8orf17Q9NRJ1 99 aa11.68□□□□□ -0.54
SND1-214ENST00000489417 MMP24-AS1A0A0U1RRL7 71 aa11.67□□□□□ -0.54
SND1-214ENST00000489417 HCG22E2RYF7 251 aa11.67□□□□□ -0.54
SND1-214ENST00000489417 C8orf87E5RJ46 101 aa11.66□□□□□ -0.54
SND1-214ENST00000489417 FAM236AA0A1B0GUQ0 79 aa11.65□□□□□ -0.54
SND1-214ENST00000489417 FAM236BA0A1B0GV22 79 aa11.65□□□□□ -0.54
SND1-214ENST00000489417 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
SND1-214ENST00000489417 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
SND1-214ENST00000489417 NOTCH2NLQ7Z3S9 236 aa11.63□□□□□ -0.55
SND1-214ENST00000489417 WFDC13Q8IUB5 93 aa11.63□□□□□ -0.55
SND1-214ENST00000489417 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
SND1-214ENST00000489417 SCGB1A1P11684 91 aa11.6□□□□□ -0.55
SND1-214ENST00000489417 LINC00313P59037 77 aa11.6□□□□□ -0.55
SND1-214ENST00000489417 hDV103S1A0JD37 113 aa11.59□□□□□ -0.55
SND1-214ENST00000489417 IGLV7-46A0A075B6I9 117 aa11.55□□□□□ -0.56
SND1-214ENST00000489417 TMEM254Q8TBM7 123 aa11.55□□□□□ -0.56
SND1-214ENST00000489417 PRR4Q16378 134 aa11.54□□□□□ -0.56
SND1-214ENST00000489417 MRPL34Q9BQ48 92 aaKnown RBP11.52□□□□□ -0.56
SND1-214ENST00000489417 C9orf92A6NGG3 77 aa11.52□□□□□ -0.57
SND1-214ENST00000489417 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
SND1-214ENST00000489417 ATOX1O00244 68 aa11.51□□□□□ -0.57
SND1-214ENST00000489417 KRTAP13-3Q3SY46 172 aa11.43□□□□□ -0.58
SND1-214ENST00000489417 NDUFS5O43920 106 aa11.43□□□□□ -0.58
SND1-214ENST00000489417 SMIM20Q8N5G0 67 aa11.43□□□□□ -0.58
SND1-214ENST00000489417 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
SND1-214ENST00000489417 OCR1Q9BZK8 76 aa11.42□□□□□ -0.58
SND1-214ENST00000489417 ANAPC13Q9BS18 74 aa11.39□□□□□ -0.59
SND1-214ENST00000489417 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
SND1-214ENST00000489417 TPRXLQ17RH7 258 aa11.37□□□□□ -0.59
SND1-214ENST00000489417 TP53AIP1Q9HCN2 124 aa11.36□□□□□ -0.59
SND1-214ENST00000489417 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
SND1-214ENST00000489417 HERC1Q15751 4861 aa11.35□□□□□ -0.59
SND1-214ENST00000489417 UQCRQO14949 82 aa11.35□□□□□ -0.59
SND1-214ENST00000489417 SERP2Q8N6R1 65 aa11.35□□□□□ -0.59
SND1-214ENST00000489417 A8MUU9 505 aa11.34□□□□□ -0.59
SND1-214ENST00000489417 XP32Q5T750 250 aa11.31□□□□□ -0.6
SND1-214ENST00000489417 Q75L30 129 aa11.29□□□□□ -0.6
SND1-214ENST00000489417 COX7CP15954 63 aa11.26□□□□□ -0.61
SND1-214ENST00000489417 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
SND1-214ENST00000489417 C5orf47Q569G3 176 aa11.24□□□□□ -0.61
SND1-214ENST00000489417 RPL37P61927 97 aaKnown RBP11.23□□□□□ -0.61
SND1-214ENST00000489417 Q5W150 140 aa11.23□□□□□ -0.61
SND1-214ENST00000489417 H0Y9P7 68 aa11.22□□□□□ -0.61
SND1-214ENST00000489417 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
SND1-214ENST00000489417 PCP4P48539 62 aa11.19□□□□□ -0.62
SND1-214ENST00000489417 MP68P56378 58 aa11.19□□□□□ -0.62
SND1-214ENST00000489417 C20orf197Q8N268 126 aa11.15□□□□□ -0.62
SND1-214ENST00000489417 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
SND1-214ENST00000489417 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
SND1-214ENST00000489417 H3BPC8 53 aa11.13□□□□□ -0.63
SND1-214ENST00000489417 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
SND1-214ENST00000489417 LPAP08519 4548 aa11.12□□□□□ -0.63
SND1-214ENST00000489417 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
SND1-214ENST00000489417 C1orf64Q8NEQ6 169 aa11.1□□□□□ -0.63
SND1-214ENST00000489417 SNURFQ9Y675 71 aa11.09□□□□□ -0.63
SND1-214ENST00000489417 HMCN2Q8NDA2 5059 aa11.07□□□□□ -0.64
SND1-214ENST00000489417 LOC101927531A0A1B0GV80 90 aa11.06□□□□□ -0.64
SND1-214ENST00000489417 KLKP1Q107X0 134 aa11.05□□□□□ -0.64
SND1-214ENST00000489417 IGKV2-30P06310 120 aa11.04□□□□□ -0.64
SND1-214ENST00000489417 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
SND1-214ENST00000489417 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
SND1-214ENST00000489417 LRP2P98164 4655 aa11.01□□□□□ -0.65
SND1-214ENST00000489417 SEC61BP60468 96 aaKnown RBP11.01□□□□□ -0.65
SND1-214ENST00000489417 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
SND1-214ENST00000489417 C7orf65Q6ZTY9 151 aa10.98□□□□□ -0.65
SND1-214ENST00000489417 CYSTM1Q9H1C7 97 aa10.98□□□□□ -0.65
SND1-214ENST00000489417 SPINK7P58062 85 aa10.93□□□□□ -0.66
SND1-214ENST00000489417 NDUFC1O43677 76 aa10.92□□□□□ -0.66
SND1-214ENST00000489417 H7BZZ5 65 aa10.88□□□□□ -0.67
SND1-214ENST00000489417 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
SND1-214ENST00000489417 HRES1P13985 223 aa10.82□□□□□ -0.68
SND1-214ENST00000489417 LCE2BO14633 110 aa10.77□□□□□ -0.68
SND1-214ENST00000489417 SPANXA2-OT1Q8N9U9 137 aa10.75□□□□□ -0.69
SND1-214ENST00000489417 KRTAP4-1Q9BYQ7 146 aa10.75□□□□□ -0.69
SND1-214ENST00000489417 TMEM258P61165 79 aa10.74□□□□□ -0.69
SND1-214ENST00000489417 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
SND1-214ENST00000489417 UBR4Q5T4S7 5183 aa10.7□□□□□ -0.7
SND1-214ENST00000489417 FAM236DA0A1B0GTK5 79 aa10.68□□□□□ -0.7
SND1-214ENST00000489417 FAM236CP0DP71 79 aa10.68□□□□□ -0.7
SND1-214ENST00000489417 ATP5EP56381 51 aaPredicted RBP10.66□□□□□ -0.7
SND1-214ENST00000489417 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
SND1-214ENST00000489417 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
SND1-214ENST00000489417 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
SND1-214ENST00000489417 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
SND1-214ENST00000489417 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
SND1-214ENST00000489417 A8MUN3 132 aa10.57□□□□□ -0.72
SND1-214ENST00000489417 ACYP2P14621 99 aa10.52□□□□□ -0.73
SND1-214ENST00000489417 RNF213Q63HN8 5207 aa10.46□□□□□ -0.74
SND1-214ENST00000489417 H1FX-AS1Q4G0G2 97 aa10.44□□□□□ -0.74
SND1-214ENST00000489417 KRTAP19-2Q3LHN2 52 aa10.43□□□□□ -0.74
SND1-214ENST00000489417 COA5Q86WW8 74 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms