RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
VTI1A-207ENST00000489357 HSPG2P98160 4391 aa5.15□□□□□ -1.59
VTI1A-207ENST00000489357 A0A087WSZ3 146 aa5.14□□□□□ -1.59
VTI1A-207ENST00000489357 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
VTI1A-207ENST00000489357 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
VTI1A-207ENST00000489357 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
VTI1A-207ENST00000489357 HCG22E2RYF7 251 aa5.13□□□□□ -1.59
VTI1A-207ENST00000489357 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
VTI1A-207ENST00000489357 Q8N9L7 120 aa5.12□□□□□ -1.59
VTI1A-207ENST00000489357 A8MWP4 228 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 H7BZZ5 65 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 K7EQZ3 153 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 Q6ZSA8 131 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
VTI1A-207ENST00000489357 IGLV7-43P04211 117 aa5.1□□□□□ -1.59
VTI1A-207ENST00000489357 CD164Q04900 197 aa5.1□□□□□ -1.59
VTI1A-207ENST00000489357 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
VTI1A-207ENST00000489357 A0A0U1RQV1 116 aa5.09□□□□□ -1.59
VTI1A-207ENST00000489357 NDUFB1O75438 58 aa5.09□□□□□ -1.59
VTI1A-207ENST00000489357 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
VTI1A-207ENST00000489357 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
VTI1A-207ENST00000489357 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
VTI1A-207ENST00000489357 FAT1Q14517 4588 aa5.08□□□□□ -1.6
VTI1A-207ENST00000489357 H3BPC8 53 aa5.07□□□□□ -1.6
VTI1A-207ENST00000489357 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
VTI1A-207ENST00000489357 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
VTI1A-207ENST00000489357 MOBPQ13875 183 aa5.06□□□□□ -1.6
VTI1A-207ENST00000489357 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
VTI1A-207ENST00000489357 VPS13BQ7Z7G8 4022 aa5.06□□□□□ -1.6
VTI1A-207ENST00000489357 IGLV9-49A0A0B4J1Y8 123 aa5.05□□□□□ -1.6
VTI1A-207ENST00000489357 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
VTI1A-207ENST00000489357 FAM229BQ4G0N7 80 aa5.05□□□□□ -1.6
VTI1A-207ENST00000489357 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
VTI1A-207ENST00000489357 SERP1Q9Y6X1 66 aa5.05□□□□□ -1.6
VTI1A-207ENST00000489357 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
VTI1A-207ENST00000489357 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
VTI1A-207ENST00000489357 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
VTI1A-207ENST00000489357 MP68P56378 58 aa5.03□□□□□ -1.6
VTI1A-207ENST00000489357 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
VTI1A-207ENST00000489357 Q96NJ1 140 aa5.03□□□□□ -1.6
VTI1A-207ENST00000489357 TP53AIP1Q9HCN2 124 aa5.03□□□□□ -1.6
VTI1A-207ENST00000489357 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
VTI1A-207ENST00000489357 Q5XG85 94 aa5.01□□□□□ -1.61
VTI1A-207ENST00000489357 MMP24-AS1A0A0U1RRL7 71 aa5□□□□□ -1.61
VTI1A-207ENST00000489357 A0A1B0GVX0 72 aa5□□□□□ -1.61
VTI1A-207ENST00000489357 SMR3BP02814 79 aaPredicted RBP5□□□□□ -1.61
VTI1A-207ENST00000489357 DEFB116Q30KQ4 102 aa5□□□□□ -1.61
VTI1A-207ENST00000489357 hDV103S1A0JD37 113 aa4.99□□□□□ -1.61
VTI1A-207ENST00000489357 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
VTI1A-207ENST00000489357 Q5VSD8 79 aa4.99□□□□□ -1.61
VTI1A-207ENST00000489357 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
VTI1A-207ENST00000489357 SRRM2Q9UQ35 2752 aaKnown RBP4.99□□□□□ -1.61
VTI1A-207ENST00000489357 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
VTI1A-207ENST00000489357 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
VTI1A-207ENST00000489357 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.62
VTI1A-207ENST00000489357 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
VTI1A-207ENST00000489357 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
VTI1A-207ENST00000489357 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
VTI1A-207ENST00000489357 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
VTI1A-207ENST00000489357 H0Y9P7 68 aa4.95□□□□□ -1.62
VTI1A-207ENST00000489357 LIMD2Q9BT23 127 aa4.95□□□□□ -1.62
VTI1A-207ENST00000489357 CYP4F30PQ9H0H9 118 aa4.95□□□□□ -1.62
VTI1A-207ENST00000489357 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
VTI1A-207ENST00000489357 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
VTI1A-207ENST00000489357 SPINK6Q6UWN8 80 aa4.93□□□□□ -1.62
VTI1A-207ENST00000489357 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
VTI1A-207ENST00000489357 ANAPC11Q9NYG5 84 aa4.93□□□□□ -1.62
VTI1A-207ENST00000489357 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
VTI1A-207ENST00000489357 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
VTI1A-207ENST00000489357 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
VTI1A-207ENST00000489357 OXTP01178 125 aa4.91□□□□□ -1.62
VTI1A-207ENST00000489357 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
VTI1A-207ENST00000489357 C1orf64Q8NEQ6 169 aa4.91□□□□□ -1.62
VTI1A-207ENST00000489357 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
VTI1A-207ENST00000489357 SPINK1P00995 79 aa4.9□□□□□ -1.63
VTI1A-207ENST00000489357 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
VTI1A-207ENST00000489357 A0A087X002 238 aa4.89□□□□□ -1.63
VTI1A-207ENST00000489357 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
VTI1A-207ENST00000489357 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
VTI1A-207ENST00000489357 LRP1Q07954 4544 aaKnown RBP4.88□□□□□ -1.63
VTI1A-207ENST00000489357 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
VTI1A-207ENST00000489357 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
VTI1A-207ENST00000489357 HERC1Q15751 4861 aa4.87□□□□□ -1.63
VTI1A-207ENST00000489357 NDUFS5O43920 106 aa4.86□□□□□ -1.63
VTI1A-207ENST00000489357 C1orf195Q5TG92 126 aa4.86□□□□□ -1.63
VTI1A-207ENST00000489357 TYMSOSQ8TAI1 123 aa4.86□□□□□ -1.63
VTI1A-207ENST00000489357 IGLV7-46A0A075B6I9 117 aa4.85□□□□□ -1.63
VTI1A-207ENST00000489357 LINC00313P59037 77 aa4.85□□□□□ -1.63
VTI1A-207ENST00000489357 Q8N9P0 234 aaPredicted RBP4.85□□□□□ -1.63
VTI1A-207ENST00000489357 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
VTI1A-207ENST00000489357 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
VTI1A-207ENST00000489357 V9GYY9 64 aa4.83□□□□□ -1.64
VTI1A-207ENST00000489357 KRTAP13-3Q3SY46 172 aa4.82□□□□□ -1.64
VTI1A-207ENST00000489357 Q1T7F1 81 aa4.81□□□□□ -1.64
VTI1A-207ENST00000489357 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
VTI1A-207ENST00000489357 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
VTI1A-207ENST00000489357 TNXBP22105 4242 aa4.8□□□□□ -1.64
VTI1A-207ENST00000489357 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms