RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 FAM236CP0DP71 79 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 SPRR1BP22528 89 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 RPL37AP61513 92 aaKnown RBP1.7□□□□□ -2.14
CALD1-221ENST00000489019 DEFB116Q30KQ4 102 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 WFDC13Q8IUB5 93 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 SNURFQ9Y675 71 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 ANK2Q01484 3957 aa1.7□□□□□ -2.14
CALD1-221ENST00000489019 HUWE1Q7Z6Z7 4374 aaKnown RBP1.7□□□□□ -2.14
CALD1-221ENST00000489019 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 A0A0U1RQV1 116 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 C8orf87E5RJ46 101 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 NDUFC1O43677 76 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 ZNF861PO60384 105 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 NDUFB1O75438 58 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 TMEM254Q8TBM7 123 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 CYSTM1Q9H1C7 97 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 C8orf17Q9NRJ1 99 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 PLAC8Q9NZF1 115 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 PSORS1C2Q9UIG4 136 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 VWFP04275 2813 aa1.69□□□□□ -2.14
CALD1-221ENST00000489019 NIPBLQ6KC79 2804 aaeCLIP1.69□□□□□ -2.14
CALD1-221ENST00000489019 IGLV7-43P04211 117 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 MP68P56378 58 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 KLKP1Q107X0 134 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 MOBPQ13875 183 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 CASC2Q6XLA1 102 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 KRTAP13-1Q8IUC0 172 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 CIRBP-AS1Q8TBR5 109 aa1.68□□□□□ -2.14
CALD1-221ENST00000489019 BAHCC1Q9P281 2608 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 A8MWP4 228 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 H7BZZ5 65 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 ATP5EP56381 51 aaPredicted RBP1.67□□□□□ -2.14
CALD1-221ENST00000489019 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 LUZP6Q538Z0 58 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 LINC00483Q53H64 154 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 PRR15Q8IV56 129 aa1.67□□□□□ -2.14
CALD1-221ENST00000489019 hDV103S1A0JD37 113 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 RPS28P62857 69 aaKnown RBP1.66□□□□□ -2.14
CALD1-221ENST00000489019 C1orf195Q5TG92 126 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 SPINK6Q6UWN8 80 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 SERP1Q9Y6X1 66 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 DNAH1Q9P2D7 4330 aa1.66□□□□□ -2.14
CALD1-221ENST00000489019 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 H0Y9P7 68 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 KRTAP10-1P60331 282 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 SSBP3-AS1Q7Z2R9 100 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 LINC00208Q96KT6 92 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 MAST4O15021 2626 aa1.65□□□□□ -2.15
CALD1-221ENST00000489019 TENM3Q9P273 2699 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 DNAH9Q9NYC9 4486 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 H3BPC8 53 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 Q96NJ1 140 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 MRPL34Q9BQ48 92 aaKnown RBP1.64□□□□□ -2.15
CALD1-221ENST00000489019 TP53AIP1Q9HCN2 124 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 STAB1Q9NY15 2570 aa1.64□□□□□ -2.15
CALD1-221ENST00000489019 FLNBO75369 2602 aaKnown RBP1.63□□□□□ -2.15
CALD1-221ENST00000489019 DYNC2H1Q8NCM8 4307 aaKnown RBP1.63□□□□□ -2.15
CALD1-221ENST00000489019 TRAV22A0A0B4J277 110 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 LCE6AA0A183 80 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 C1orf64Q8NEQ6 169 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 LIMD2Q9BT23 127 aa1.63□□□□□ -2.15
CALD1-221ENST00000489019 LINC00313P59037 77 aa1.62□□□□□ -2.15
CALD1-221ENST00000489019 FAM229BQ4G0N7 80 aa1.62□□□□□ -2.15
CALD1-221ENST00000489019 Q6ZSA8 131 aa1.62□□□□□ -2.15
CALD1-221ENST00000489019 ZCCHC13Q8WW36 166 aaKnown RBP1.62□□□□□ -2.15
CALD1-221ENST00000489019 PKD1L1Q8TDX9 2849 aa1.62□□□□□ -2.15
CALD1-221ENST00000489019 SMR3BP02814 79 aaPredicted RBP1.61□□□□□ -2.15
CALD1-221ENST00000489019 ASB16-AS1Q495Z4 193 aa1.61□□□□□ -2.15
CALD1-221ENST00000489019 Q5XG85 94 aa1.61□□□□□ -2.15
CALD1-221ENST00000489019 COL6A5A8TX70 2615 aa1.61□□□□□ -2.15
CALD1-221ENST00000489019 DNAH10Q8IVF4 4471 aa1.61□□□□□ -2.15
CALD1-221ENST00000489019 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
CALD1-221ENST00000489019 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 K7ERS5 55 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 KRTAP13-2Q52LG2 175 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 SPANXA2-OT1Q8N9U9 137 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 RETNLBQ9BQ08 111 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 CYP4F30PQ9H0H9 118 aa1.6□□□□□ -2.15
CALD1-221ENST00000489019 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
CALD1-221ENST00000489019 DNAH7Q8WXX0 4024 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 LYSTQ99698 3801 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 A6NED7 52 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 SPINK1P00995 79 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 Q5W150 140 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 SPAG11AQ6PDA7 123 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 FP248Q71RG6 208 aaPredicted RBP1.59□□□□□ -2.15
CALD1-221ENST00000489019 LINC00304Q8N9R0 145 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
CALD1-221ENST00000489019 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.16
CALD1-221ENST00000489019 ALMS1Q8TCU4 4167 aa1.58□□□□□ -2.16
CALD1-221ENST00000489019 PP632Q6XCG6 107 aa1.58□□□□□ -2.16
CALD1-221ENST00000489019 COL7A1Q02388 2944 aa1.57□□□□□ -2.16
CALD1-221ENST00000489019 NBEAL1Q6ZS30 2694 aa1.57□□□□□ -2.16
CALD1-221ENST00000489019 CSMD3Q7Z407 3707 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms