RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 K7ERU9 68 aa6.33□□□□□ -1.4
HDLBP-242ENST00000488013 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
HDLBP-242ENST00000488013 J3KT08 172 aa6.32□□□□□ -1.4
HDLBP-242ENST00000488013 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
HDLBP-242ENST00000488013 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
HDLBP-242ENST00000488013 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
HDLBP-242ENST00000488013 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
HDLBP-242ENST00000488013 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
HDLBP-242ENST00000488013 Q6ZVQ6 151 aa6.27□□□□□ -1.41
HDLBP-242ENST00000488013 BPY2O14599 106 aa6.26□□□□□ -1.41
HDLBP-242ENST00000488013 SIGMAR1Q99720 223 aa6.26□□□□□ -1.41
HDLBP-242ENST00000488013 NDUFB1O75438 58 aa6.25□□□□□ -1.41
HDLBP-242ENST00000488013 ATP5EP2Q5VTU8 51 aa6.25□□□□□ -1.41
HDLBP-242ENST00000488013 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
HDLBP-242ENST00000488013 LINC00643Q86TS7 51 aa6.24□□□□□ -1.41
HDLBP-242ENST00000488013 CXCL6P80162 114 aa6.23□□□□□ -1.41
HDLBP-242ENST00000488013 Q96NJ1 140 aa6.23□□□□□ -1.41
HDLBP-242ENST00000488013 A8MWP4 228 aa6.22□□□□□ -1.41
HDLBP-242ENST00000488013 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.42
HDLBP-242ENST00000488013 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
HDLBP-242ENST00000488013 PRR4Q16378 134 aa6.2□□□□□ -1.42
HDLBP-242ENST00000488013 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
HDLBP-242ENST00000488013 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
HDLBP-242ENST00000488013 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
HDLBP-242ENST00000488013 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
HDLBP-242ENST00000488013 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
HDLBP-242ENST00000488013 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
HDLBP-242ENST00000488013 DSCR10P59022 87 aa6.16□□□□□ -1.42
HDLBP-242ENST00000488013 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
HDLBP-242ENST00000488013 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
HDLBP-242ENST00000488013 IGKV3D-7A0A0C4DH55 119 aa6.14□□□□□ -1.43
HDLBP-242ENST00000488013 LINC00313P59037 77 aa6.14□□□□□ -1.43
HDLBP-242ENST00000488013 IMUPQ9GZP8 106 aa6.13□□□□□ -1.43
HDLBP-242ENST00000488013 K7EQZ3 153 aa6.12□□□□□ -1.43
HDLBP-242ENST00000488013 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
HDLBP-242ENST00000488013 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
HDLBP-242ENST00000488013 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
HDLBP-242ENST00000488013 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
HDLBP-242ENST00000488013 HIST1H4AP62805 103 aaKnown RBP6.09□□□□□ -1.43
HDLBP-242ENST00000488013 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
HDLBP-242ENST00000488013 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
HDLBP-242ENST00000488013 Q8N9L7 120 aa6.07□□□□□ -1.44
HDLBP-242ENST00000488013 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
HDLBP-242ENST00000488013 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
HDLBP-242ENST00000488013 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
HDLBP-242ENST00000488013 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
HDLBP-242ENST00000488013 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
HDLBP-242ENST00000488013 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
HDLBP-242ENST00000488013 MT-ATP8P03928 68 aa6.03□□□□□ -1.44
HDLBP-242ENST00000488013 Q75L30 129 aa6.03□□□□□ -1.44
HDLBP-242ENST00000488013 NOTCH2NLQ7Z3S9 236 aa6.03□□□□□ -1.44
HDLBP-242ENST00000488013 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
HDLBP-242ENST00000488013 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
HDLBP-242ENST00000488013 A8MUU9 505 aa6.01□□□□□ -1.45
HDLBP-242ENST00000488013 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
HDLBP-242ENST00000488013 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
HDLBP-242ENST00000488013 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
HDLBP-242ENST00000488013 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
HDLBP-242ENST00000488013 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
HDLBP-242ENST00000488013 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
HDLBP-242ENST00000488013 RNF213Q63HN8 5207 aa5.98□□□□□ -1.45
HDLBP-242ENST00000488013 SCGB1A1P11684 91 aa5.98□□□□□ -1.45
HDLBP-242ENST00000488013 A0A087WVE0 104 aa5.97□□□□□ -1.45
HDLBP-242ENST00000488013 NDUFS5O43920 106 aa5.97□□□□□ -1.45
HDLBP-242ENST00000488013 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
HDLBP-242ENST00000488013 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
HDLBP-242ENST00000488013 LRP2P98164 4655 aa5.93□□□□□ -1.46
HDLBP-242ENST00000488013 FAM236AA0A1B0GUQ0 79 aa5.92□□□□□ -1.46
HDLBP-242ENST00000488013 FAM236BA0A1B0GV22 79 aa5.92□□□□□ -1.46
HDLBP-242ENST00000488013 UQCRQO14949 82 aa5.92□□□□□ -1.46
HDLBP-242ENST00000488013 ZCCHC13Q8WW36 166 aaKnown RBP5.92□□□□□ -1.46
HDLBP-242ENST00000488013 ATOX1O00244 68 aa5.91□□□□□ -1.46
HDLBP-242ENST00000488013 LPAP08519 4548 aa5.91□□□□□ -1.46
HDLBP-242ENST00000488013 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
HDLBP-242ENST00000488013 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
HDLBP-242ENST00000488013 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
HDLBP-242ENST00000488013 C5orf47Q569G3 176 aa5.87□□□□□ -1.47
HDLBP-242ENST00000488013 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
HDLBP-242ENST00000488013 OCR1Q9BZK8 76 aa5.87□□□□□ -1.47
HDLBP-242ENST00000488013 MP68P56378 58 aa5.86□□□□□ -1.47
HDLBP-242ENST00000488013 TRAV7A0A075B6U4 112 aa5.85□□□□□ -1.47
HDLBP-242ENST00000488013 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
HDLBP-242ENST00000488013 H3BPC8 53 aa5.84□□□□□ -1.47
HDLBP-242ENST00000488013 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
HDLBP-242ENST00000488013 Q5W150 140 aa5.82□□□□□ -1.48
HDLBP-242ENST00000488013 MUC17Q685J3 4493 aa5.81□□□□□ -1.48
HDLBP-242ENST00000488013 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
HDLBP-242ENST00000488013 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
HDLBP-242ENST00000488013 H0Y9P7 68 aa5.8□□□□□ -1.48
HDLBP-242ENST00000488013 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
HDLBP-242ENST00000488013 SPINK7P58062 85 aa5.79□□□□□ -1.48
HDLBP-242ENST00000488013 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
HDLBP-242ENST00000488013 MUC2Q02817 5179 aa5.76□□□□□ -1.49
HDLBP-242ENST00000488013 IGKV2D-30A0A075B6S6 120 aa5.76□□□□□ -1.49
HDLBP-242ENST00000488013 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
HDLBP-242ENST00000488013 ANAPC13Q9BS18 74 aa5.75□□□□□ -1.49
HDLBP-242ENST00000488013 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
HDLBP-242ENST00000488013 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
HDLBP-242ENST00000488013 COX7CP15954 63 aa5.73□□□□□ -1.49
HDLBP-242ENST00000488013 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms