RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 KIAA0586Q9BVV6 1533 aa-0.79□□□□□ -2.54
LTN1-206ENST00000486427 UACAQ9BZF9 1416 aa-0.8□□□□□ -2.54
LTN1-206ENST00000486427 PARP4Q9UKK3 1724 aaKnown RBP-0.8□□□□□ -2.54
LTN1-206ENST00000486427 FRYQ5TBA9 3013 aa-0.8□□□□□ -2.54
LTN1-206ENST00000486427 KDM5DQ9BY66 1539 aa-0.8□□□□□ -2.54
LTN1-206ENST00000486427 NIPBLQ6KC79 2804 aaeCLIP-0.8□□□□□ -2.54
LTN1-206ENST00000486427 A0A087WXM4 84 aa-0.81□□□□□ -2.54
LTN1-206ENST00000486427 SMIM13P0DJ93 91 aa-0.81□□□□□ -2.54
LTN1-206ENST00000486427 DEFB121Q5J5C9 76 aa-0.81□□□□□ -2.54
LTN1-206ENST00000486427 ATP5EP2Q5VTU8 51 aa-0.81□□□□□ -2.54
LTN1-206ENST00000486427 DEFB131BA0A096LNP1 70 aa-0.82□□□□□ -2.54
LTN1-206ENST00000486427 HMGA1P17096 107 aaKnown RBP-0.82□□□□□ -2.54
LTN1-206ENST00000486427 MT1HP80294 61 aa-0.82□□□□□ -2.54
LTN1-206ENST00000486427 ST20Q9HBF5 79 aa-0.82□□□□□ -2.54
LTN1-206ENST00000486427 NHSQ6T4R5 1651 aa-0.82□□□□□ -2.54
LTN1-206ENST00000486427 HFM1A2PYH4 1435 aa-0.82□□□□□ -2.54
LTN1-206ENST00000486427 INO80Q9ULG1 1556 aaPredicted RBP-0.83□□□□□ -2.54
LTN1-206ENST00000486427 C5orf42Q9H799 3197 aa-0.83□□□□□ -2.54
LTN1-206ENST00000486427 TOGARAM1Q9Y4F4 1720 aa-0.83□□□□□ -2.54
LTN1-206ENST00000486427 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.83□□□□□ -2.54
LTN1-206ENST00000486427 KRTAP19-5Q3LI72 72 aa-0.83□□□□□ -2.54
LTN1-206ENST00000486427 KIF1AQ12756 1690 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 DNAH17Q9UFH2 4485 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 H3BUT2 72 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 CRIP1P50238 77 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 ADIRFQ15847 76 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 CFAP74Q9C0B2 1584 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 NRAPQ86VF7 1730 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 TLN2Q9Y4G6 2542 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 DCAF1Q9Y4B6 1507 aa-0.84□□□□□ -2.54
LTN1-206ENST00000486427 ARHGAP35Q9NRY4 1499 aa-0.85□□□□□ -2.55
LTN1-206ENST00000486427 RB1CC1Q8TDY2 1594 aa-0.85□□□□□ -2.55
LTN1-206ENST00000486427 KCNQ1DNQ9H478 68 aa-0.85□□□□□ -2.55
LTN1-206ENST00000486427 BPTFQ12830 3046 aa-0.85□□□□□ -2.55
LTN1-206ENST00000486427 MED14O60244 1454 aa-0.86□□□□□ -2.55
LTN1-206ENST00000486427 RALGAPBQ86X10 1494 aa-0.86□□□□□ -2.55
LTN1-206ENST00000486427 MRPL33O75394 65 aaKnown RBP-0.86□□□□□ -2.55
LTN1-206ENST00000486427 GNG2P59768 71 aa-0.86□□□□□ -2.55
LTN1-206ENST00000486427 DEFB1P60022 68 aa-0.86□□□□□ -2.55
LTN1-206ENST00000486427 SPENQ96T58 3664 aaKnown RBP-0.86□□□□□ -2.55
LTN1-206ENST00000486427 LRRIQ1Q96JM4 1722 aa-0.86□□□□□ -2.55
LTN1-206ENST00000486427 RIF1Q5UIP0 2472 aaKnown RBP-0.87□□□□□ -2.55
LTN1-206ENST00000486427 ABCC1P33527 1531 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 WT1-ASQ06250 92 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 BVES-AS1Q5T3Y7 98 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 S100A13Q99584 98 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 USP9XQ93008 2570 aaPredicted RBP-0.87□□□□□ -2.55
LTN1-206ENST00000486427 ERVK-7P63135 1459 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 CD163L1Q9NR16 1453 aa-0.87□□□□□ -2.55
LTN1-206ENST00000486427 UBL5Q9BZL1 73 aa-0.88□□□□□ -2.55
LTN1-206ENST00000486427 ITPR1Q14643 2758 aa-0.88□□□□□ -2.55
LTN1-206ENST00000486427 LMTK2Q8IWU2 1503 aa-0.89□□□□□ -2.55
LTN1-206ENST00000486427 RPS27P42677 84 aaKnown RBP-0.89□□□□□ -2.55
LTN1-206ENST00000486427 ENHOQ6UWT2 76 aa-0.89□□□□□ -2.55
LTN1-206ENST00000486427 RPS27LQ71UM5 84 aaKnown RBP-0.89□□□□□ -2.55
LTN1-206ENST00000486427 LY75O60449 1722 aa-0.89□□□□□ -2.55
LTN1-206ENST00000486427 SRCAPQ6ZRS2 3230 aa-0.9□□□□□ -2.55
LTN1-206ENST00000486427 COL12A1Q99715 3063 aa-0.9□□□□□ -2.55
LTN1-206ENST00000486427 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.9□□□□□ -2.55
LTN1-206ENST00000486427 CDC42BPAQ5VT25 1732 aa-0.9□□□□□ -2.55
LTN1-206ENST00000486427 DIP2AQ14689 1571 aa-0.91□□□□□ -2.55
LTN1-206ENST00000486427 SPTBN5Q9NRC6 3674 aaKnown RBP-0.91□□□□□ -2.55
LTN1-206ENST00000486427 IGLV5-48A0A075B6I7 105 aa-0.91□□□□□ -2.56
LTN1-206ENST00000486427 MINOS1Q5TGZ0 78 aa-0.91□□□□□ -2.56
LTN1-206ENST00000486427 DNAH10Q8IVF4 4471 aa-0.91□□□□□ -2.56
LTN1-206ENST00000486427 CELSR3Q9NYQ7 3312 aa-0.91□□□□□ -2.56
LTN1-206ENST00000486427 C3P01024 1663 aa-0.91□□□□□ -2.56
LTN1-206ENST00000486427 DNAH5Q8TE73 4624 aa-0.92□□□□□ -2.56
LTN1-206ENST00000486427 MYO5CQ9NQX4 1742 aa-0.92□□□□□ -2.56
LTN1-206ENST00000486427 SMR3BP02814 79 aaPredicted RBP-0.92□□□□□ -2.56
LTN1-206ENST00000486427 NCBP2-AS2Q69YL0 99 aa-0.92□□□□□ -2.56
LTN1-206ENST00000486427 C18orf32Q8TCD1 76 aa-0.92□□□□□ -2.56
LTN1-206ENST00000486427 CCDC18Q5T9S5 1454 aa-0.92□□□□□ -2.56
LTN1-206ENST00000486427 MROH1Q8NDA8 1641 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 MMP24-AS1A0A0U1RRL7 71 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 ETDCA0A1B0GVM5 59 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 H3BVH4 76 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 TNP1P09430 55 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 CLPSL2Q6UWE3 100 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 CSMD1Q96PZ7 3565 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 ABCA8O94911 1581 aa-0.93□□□□□ -2.56
LTN1-206ENST00000486427 SMARCA2P51531 1590 aa-0.94□□□□□ -2.56
LTN1-206ENST00000486427 SFTA3P0C7M3 94 aa-0.95□□□□□ -2.56
LTN1-206ENST00000486427 KRTAP8-1Q8IUC2 63 aa-0.95□□□□□ -2.56
LTN1-206ENST00000486427 CHD7Q9P2D1 2997 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 ANKARQ7Z5J8 1434 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 FCER1GP30273 86 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 MT1XP80297 61 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 C6orf48Q9UBA6 75 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 CDC42BPGQ6DT37 1551 aa-0.96□□□□□ -2.56
LTN1-206ENST00000486427 ASXL1Q8IXJ9 1541 aa-0.97□□□□□ -2.56
LTN1-206ENST00000486427 LRBAP50851 2863 aa-0.97□□□□□ -2.56
LTN1-206ENST00000486427 MAST1Q9Y2H9 1570 aa-0.97□□□□□ -2.56
LTN1-206ENST00000486427 CEP295Q9C0D2 2601 aa-0.97□□□□□ -2.56
LTN1-206ENST00000486427 ABCC6O95255 1503 aa-0.98□□□□□ -2.57
LTN1-206ENST00000486427 CLASP1Q7Z460 1538 aa-0.98□□□□□ -2.57
LTN1-206ENST00000486427 ADGRG4Q8IZF6 3080 aa-0.98□□□□□ -2.57
LTN1-206ENST00000486427 SPTAN1Q13813 2472 aaKnown RBP-0.98□□□□□ -2.57
LTN1-206ENST00000486427 MYO9AB2RTY4 2548 aa-0.98□□□□□ -2.57
LTN1-206ENST00000486427 H3BUA1 57 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms