RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 LINC00846Q9NV44 126 aa3.86□□□□□ -1.79
TMEM39A-209ENST00000486235 TRBV7-6A0A0J9YX20 115 aa3.85□□□□□ -1.79
TMEM39A-209ENST00000486235 H0Y9J4 135 aa3.85□□□□□ -1.79
TMEM39A-209ENST00000486235 ERC2-IT1O76042 136 aa3.85□□□□□ -1.79
TMEM39A-209ENST00000486235 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
TMEM39A-209ENST00000486235 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
TMEM39A-209ENST00000486235 IGLV1-50A0A075B6I6 118 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 A0A087X002 238 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 A0A1B0GW54 56 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 RBM3P98179 157 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 KLKP1Q107X0 134 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 KRTAP11-1Q8IUC1 163 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 TOMM7Q9P0U1 55 aa3.84□□□□□ -1.79
TMEM39A-209ENST00000486235 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
TMEM39A-209ENST00000486235 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 NCR3O14931 201 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 SPAG11BQ08648 103 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 DSCR8Q96T75 97 aa3.82□□□□□ -1.8
TMEM39A-209ENST00000486235 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 PFN2P35080 140 aa3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 LINC00575Q6W349 94 aa3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 Q6ZQT0 140 aa3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
TMEM39A-209ENST00000486235 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
TMEM39A-209ENST00000486235 UBE2BP63146 152 aa3.8□□□□□ -1.8
TMEM39A-209ENST00000486235 IGLV6-57P01721 117 aa3.79□□□□□ -1.8
TMEM39A-209ENST00000486235 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
TMEM39A-209ENST00000486235 KIAA0087Q14695 138 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 UNQ6190/PRO20217Q6UXQ8 127 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 NKAPP1Q8N9T2 125 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 RETNLBQ9BQ08 111 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
TMEM39A-209ENST00000486235 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 A0A087WVE0 104 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 TRBV7-4A0A0J9YYF1 115 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 C20orf197Q8N268 126 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
TMEM39A-209ENST00000486235 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 H7BZZ5 65 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 ZNF861PO60384 105 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 COX7BP24311 80 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 Q5XG85 94 aa3.76□□□□□ -1.81
TMEM39A-209ENST00000486235 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
TMEM39A-209ENST00000486235 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
TMEM39A-209ENST00000486235 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
TMEM39A-209ENST00000486235 ELOF1P60002 83 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-209ENST00000486235 ANAPC11Q9NYG5 84 aa3.74□□□□□ -1.81
TMEM39A-209ENST00000486235 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
TMEM39A-209ENST00000486235 M0R378 163 aa3.73□□□□□ -1.81
TMEM39A-209ENST00000486235 ZNF73O43830 326 aaPredicted RBP3.73□□□□□ -1.81
TMEM39A-209ENST00000486235 Q6ZQY7 126 aa3.73□□□□□ -1.81
TMEM39A-209ENST00000486235 CD164Q04900 197 aa3.72□□□□□ -1.81
TMEM39A-209ENST00000486235 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
TMEM39A-209ENST00000486235 CYSTM1Q9H1C7 97 aa3.72□□□□□ -1.81
TMEM39A-209ENST00000486235 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 BPY2O14599 106 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 NREPQ16612 68 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 TPRXLQ17RH7 258 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 Q8N377 158 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 LINC00304Q8N9R0 145 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 XAGE1AQ9HD64 81 aa3.71□□□□□ -1.82
TMEM39A-209ENST00000486235 F8WEM9 126 aa3.7□□□□□ -1.82
TMEM39A-209ENST00000486235 NDUFB1O75438 58 aa3.7□□□□□ -1.82
TMEM39A-209ENST00000486235 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
TMEM39A-209ENST00000486235 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
TMEM39A-209ENST00000486235 IGLV5-48A0A075B6I7 105 aa3.68□□□□□ -1.82
TMEM39A-209ENST00000486235 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
TMEM39A-209ENST00000486235 UBE2AP49459 152 aa3.67□□□□□ -1.82
TMEM39A-209ENST00000486235 KCNQ1DNQ9H478 68 aa3.67□□□□□ -1.82
TMEM39A-209ENST00000486235 H3BPC8 53 aa3.66□□□□□ -1.82
TMEM39A-209ENST00000486235 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
TMEM39A-209ENST00000486235 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
TMEM39A-209ENST00000486235 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
TMEM39A-209ENST00000486235 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-209ENST00000486235 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
TMEM39A-209ENST00000486235 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
TMEM39A-209ENST00000486235 PRLHP81277 87 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 Q1T7F1 81 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 ASB16-AS1Q495Z4 193 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 Q8NDZ9 215 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 SPRR4Q96PI1 79 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
TMEM39A-209ENST00000486235 ETDCA0A1B0GVM5 59 aa3.63□□□□□ -1.83
TMEM39A-209ENST00000486235 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-209ENST00000486235 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
TMEM39A-209ENST00000486235 C1orf195Q5TG92 126 aa3.62□□□□□ -1.83
TMEM39A-209ENST00000486235 Q6ZRX8 168 aa3.62□□□□□ -1.83
TMEM39A-209ENST00000486235 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
TMEM39A-209ENST00000486235 hDV103S1A0JD37 113 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms