RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 A0A1B0GV90 55 aa3.23□□□□□ -1.89
COPS3-208ENST00000486032 H3BT86 120 aa3.23□□□□□ -1.89
COPS3-208ENST00000486032 SPINK1P00995 79 aa3.23□□□□□ -1.89
COPS3-208ENST00000486032 RBM3P98179 157 aaKnown RBP3.23□□□□□ -1.89
COPS3-208ENST00000486032 PRR4Q16378 134 aa3.23□□□□□ -1.89
COPS3-208ENST00000486032 DSCR8Q96T75 97 aa3.23□□□□□ -1.89
COPS3-208ENST00000486032 JMJD7-PLA2G4BH0Y9G9 81 aa3.22□□□□□ -1.89
COPS3-208ENST00000486032 CCKP06307 115 aa3.22□□□□□ -1.89
COPS3-208ENST00000486032 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
COPS3-208ENST00000486032 TRBV7-7A0A0K0K1E9 115 aa3.21□□□□□ -1.9
COPS3-208ENST00000486032 A0A1W2PNM2 257 aa3.21□□□□□ -1.9
COPS3-208ENST00000486032 LIMD2Q9BT23 127 aa3.21□□□□□ -1.9
COPS3-208ENST00000486032 A0A087WSZ3 146 aa3.2□□□□□ -1.9
COPS3-208ENST00000486032 CD164Q04900 197 aa3.2□□□□□ -1.9
COPS3-208ENST00000486032 TEN1Q86WV5 123 aa3.2□□□□□ -1.9
COPS3-208ENST00000486032 PRO0461Q9UI25 63 aa3.2□□□□□ -1.9
COPS3-208ENST00000486032 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
COPS3-208ENST00000486032 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
COPS3-208ENST00000486032 F8W1H4 67 aa3.19□□□□□ -1.9
COPS3-208ENST00000486032 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
COPS3-208ENST00000486032 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
COPS3-208ENST00000486032 ETDBQ3ZM63 59 aa3.18□□□□□ -1.9
COPS3-208ENST00000486032 Q6ZQT0 140 aa3.18□□□□□ -1.9
COPS3-208ENST00000486032 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 LOC110117498A0A087WWA1 95 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 DEFB116Q30KQ4 102 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 Q6Q795 121 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 OBSCN-AS1Q96MR7 158 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 SS18L2Q9UHA2 77 aa3.17□□□□□ -1.9
COPS3-208ENST00000486032 PDE6GP18545 87 aa3.16□□□□□ -1.9
COPS3-208ENST00000486032 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
COPS3-208ENST00000486032 C9orf92A6NGG3 77 aa3.15□□□□□ -1.91
COPS3-208ENST00000486032 Q5XG85 94 aa3.15□□□□□ -1.91
COPS3-208ENST00000486032 SIGMAR1Q99720 223 aa3.15□□□□□ -1.91
COPS3-208ENST00000486032 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
COPS3-208ENST00000486032 NREPQ16612 68 aa3.14□□□□□ -1.91
COPS3-208ENST00000486032 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
COPS3-208ENST00000486032 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
COPS3-208ENST00000486032 ASB16-AS1Q495Z4 193 aa3.13□□□□□ -1.91
COPS3-208ENST00000486032 Q96NJ1 140 aa3.12□□□□□ -1.91
COPS3-208ENST00000486032 DSCR10P59022 87 aa3.11□□□□□ -1.91
COPS3-208ENST00000486032 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
COPS3-208ENST00000486032 LINC00846Q9NV44 126 aa3.11□□□□□ -1.91
COPS3-208ENST00000486032 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
COPS3-208ENST00000486032 A0A1B0GW54 56 aa3.1□□□□□ -1.91
COPS3-208ENST00000486032 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
COPS3-208ENST00000486032 Q6ZVQ6 151 aa3.1□□□□□ -1.91
COPS3-208ENST00000486032 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
COPS3-208ENST00000486032 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
COPS3-208ENST00000486032 J3KT08 172 aa3.09□□□□□ -1.91
COPS3-208ENST00000486032 BPY2O14599 106 aa3.09□□□□□ -1.91
COPS3-208ENST00000486032 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
COPS3-208ENST00000486032 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
COPS3-208ENST00000486032 MUC2Q02817 5179 aa3.08□□□□□ -1.92
COPS3-208ENST00000486032 NDUFB1O75438 58 aa3.08□□□□□ -1.92
COPS3-208ENST00000486032 A0A1B0GVX0 72 aa3.07□□□□□ -1.92
COPS3-208ENST00000486032 LINC00313P59037 77 aa3.07□□□□□ -1.92
COPS3-208ENST00000486032 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
COPS3-208ENST00000486032 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
COPS3-208ENST00000486032 IGKV3D-7A0A0C4DH55 119 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 A8MWP4 228 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 J3QR89 54 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 K7EQZ3 153 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 ACYP1P07311 99 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 Q8N9L7 120 aa3.06□□□□□ -1.92
COPS3-208ENST00000486032 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
COPS3-208ENST00000486032 C8orf87E5RJ46 101 aa3.05□□□□□ -1.92
COPS3-208ENST00000486032 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
COPS3-208ENST00000486032 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
COPS3-208ENST00000486032 C8orf17Q9NRJ1 99 aa3.05□□□□□ -1.92
COPS3-208ENST00000486032 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
COPS3-208ENST00000486032 WFDC13Q8IUB5 93 aa3.04□□□□□ -1.92
COPS3-208ENST00000486032 PRR15Q8IV56 129 aa3.04□□□□□ -1.92
COPS3-208ENST00000486032 SEC61BP60468 96 aaKnown RBP3.03□□□□□ -1.92
COPS3-208ENST00000486032 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
COPS3-208ENST00000486032 PCOTHQ58A44 107 aa3.03□□□□□ -1.92
COPS3-208ENST00000486032 KRTAP4-1Q9BYQ7 146 aa3.03□□□□□ -1.92
COPS3-208ENST00000486032 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
COPS3-208ENST00000486032 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
COPS3-208ENST00000486032 NDUFS5O43920 106 aa3.02□□□□□ -1.93
COPS3-208ENST00000486032 HIST1H4AP62805 103 aaKnown RBP3.02□□□□□ -1.93
COPS3-208ENST00000486032 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
COPS3-208ENST00000486032 hDV103S1A0JD37 113 aa3.01□□□□□ -1.93
COPS3-208ENST00000486032 K7ERU9 68 aa3.01□□□□□ -1.93
COPS3-208ENST00000486032 CXCL6P80162 114 aa3.01□□□□□ -1.93
COPS3-208ENST00000486032 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
COPS3-208ENST00000486032 LINC00643Q86TS7 51 aa3.01□□□□□ -1.93
COPS3-208ENST00000486032 A8MUU9 505 aa3□□□□□ -1.93
COPS3-208ENST00000486032 Q75L30 129 aa3□□□□□ -1.93
COPS3-208ENST00000486032 TMEM254Q8TBM7 123 aa3□□□□□ -1.93
COPS3-208ENST00000486032 C20orf166-AS1Q96NR2 134 aa3□□□□□ -1.93
COPS3-208ENST00000486032 MRPL34Q9BQ48 92 aaKnown RBP3□□□□□ -1.93
COPS3-208ENST00000486032 HCG22E2RYF7 251 aa2.99□□□□□ -1.93
COPS3-208ENST00000486032 ATP5EP2Q5VTU8 51 aa2.99□□□□□ -1.93
COPS3-208ENST00000486032 A0A087WVE0 104 aa2.98□□□□□ -1.93
COPS3-208ENST00000486032 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
COPS3-208ENST00000486032 MT-ATP8P03928 68 aa2.95□□□□□ -1.94
COPS3-208ENST00000486032 IGKV2D-30A0A075B6S6 120 aa2.92□□□□□ -1.94
COPS3-208ENST00000486032 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
COPS3-208ENST00000486032 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms