RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 HERC1Q15751 4861 aa8.13□□□□□ -1.11
LRIF1-202ENST00000485275 A8MWP4 228 aa8.13□□□□□ -1.11
LRIF1-202ENST00000485275 J3KT08 172 aa8.12□□□□□ -1.11
LRIF1-202ENST00000485275 A0A087WVE0 104 aa8.1□□□□□ -1.11
LRIF1-202ENST00000485275 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
LRIF1-202ENST00000485275 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
LRIF1-202ENST00000485275 A0A1B0GVX0 72 aa8.08□□□□□ -1.12
LRIF1-202ENST00000485275 HIST1H4AP62805 103 aaKnown RBP8.07□□□□□ -1.12
LRIF1-202ENST00000485275 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
LRIF1-202ENST00000485275 LPAP08519 4548 aa8.06□□□□□ -1.12
LRIF1-202ENST00000485275 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
LRIF1-202ENST00000485275 NDUFB1O75438 58 aa8.03□□□□□ -1.12
LRIF1-202ENST00000485275 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
LRIF1-202ENST00000485275 IMUPQ9GZP8 106 aa8.02□□□□□ -1.13
LRIF1-202ENST00000485275 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
LRIF1-202ENST00000485275 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
LRIF1-202ENST00000485275 C9orf92A6NGG3 77 aa8□□□□□ -1.13
LRIF1-202ENST00000485275 PRR4Q16378 134 aa8□□□□□ -1.13
LRIF1-202ENST00000485275 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
LRIF1-202ENST00000485275 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
LRIF1-202ENST00000485275 WFDC13Q8IUB5 93 aa7.99□□□□□ -1.13
LRIF1-202ENST00000485275 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
LRIF1-202ENST00000485275 KRTAP13-3Q3SY46 172 aa7.97□□□□□ -1.13
LRIF1-202ENST00000485275 LINC00313P59037 77 aa7.97□□□□□ -1.13
LRIF1-202ENST00000485275 C8orf87E5RJ46 101 aa7.96□□□□□ -1.14
LRIF1-202ENST00000485275 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
LRIF1-202ENST00000485275 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
LRIF1-202ENST00000485275 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
LRIF1-202ENST00000485275 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
LRIF1-202ENST00000485275 LRP2P98164 4655 aa7.94□□□□□ -1.14
LRIF1-202ENST00000485275 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
LRIF1-202ENST00000485275 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
LRIF1-202ENST00000485275 MRPL34Q9BQ48 92 aaKnown RBP7.9□□□□□ -1.14
LRIF1-202ENST00000485275 XP32Q5T750 250 aa7.89□□□□□ -1.15
LRIF1-202ENST00000485275 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
LRIF1-202ENST00000485275 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
LRIF1-202ENST00000485275 A8MUU9 505 aa7.84□□□□□ -1.15
LRIF1-202ENST00000485275 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
LRIF1-202ENST00000485275 NDUFS5O43920 106 aa7.82□□□□□ -1.16
LRIF1-202ENST00000485275 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
LRIF1-202ENST00000485275 Q75L30 129 aa7.8□□□□□ -1.16
LRIF1-202ENST00000485275 ATOX1O00244 68 aa7.78□□□□□ -1.16
LRIF1-202ENST00000485275 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
LRIF1-202ENST00000485275 Q5W150 140 aa7.78□□□□□ -1.16
LRIF1-202ENST00000485275 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
LRIF1-202ENST00000485275 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
LRIF1-202ENST00000485275 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
LRIF1-202ENST00000485275 TRAV7A0A075B6U4 112 aa7.71□□□□□ -1.17
LRIF1-202ENST00000485275 UQCRQO14949 82 aa7.71□□□□□ -1.18
LRIF1-202ENST00000485275 SERP2Q8N6R1 65 aa7.69□□□□□ -1.18
LRIF1-202ENST00000485275 TRAV22A0A0B4J277 110 aa7.69□□□□□ -1.18
LRIF1-202ENST00000485275 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
LRIF1-202ENST00000485275 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
LRIF1-202ENST00000485275 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
LRIF1-202ENST00000485275 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
LRIF1-202ENST00000485275 H0Y9P7 68 aa7.66□□□□□ -1.18
LRIF1-202ENST00000485275 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
LRIF1-202ENST00000485275 COX7CP15954 63 aa7.64□□□□□ -1.19
LRIF1-202ENST00000485275 C5orf47Q569G3 176 aa7.63□□□□□ -1.19
LRIF1-202ENST00000485275 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
LRIF1-202ENST00000485275 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
LRIF1-202ENST00000485275 MUC2Q02817 5179 aa7.6□□□□□ -1.19
LRIF1-202ENST00000485275 A0A0U1RQV1 116 aa7.59□□□□□ -1.19
LRIF1-202ENST00000485275 CCDC179H3BU77 68 aa7.59□□□□□ -1.19
LRIF1-202ENST00000485275 C20orf197Q8N268 126 aa7.59□□□□□ -1.19
LRIF1-202ENST00000485275 IGKV2-30P06310 120 aa7.59□□□□□ -1.2
LRIF1-202ENST00000485275 MP68P56378 58 aa7.59□□□□□ -1.2
LRIF1-202ENST00000485275 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.2
LRIF1-202ENST00000485275 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.2
LRIF1-202ENST00000485275 SNURFQ9Y675 71 aa7.59□□□□□ -1.2
LRIF1-202ENST00000485275 C1orf64Q8NEQ6 169 aa7.58□□□□□ -1.2
LRIF1-202ENST00000485275 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
LRIF1-202ENST00000485275 SPINK7P58062 85 aa7.55□□□□□ -1.2
LRIF1-202ENST00000485275 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
LRIF1-202ENST00000485275 LOC101927531A0A1B0GV80 90 aa7.54□□□□□ -1.2
LRIF1-202ENST00000485275 H3BPC8 53 aa7.54□□□□□ -1.2
LRIF1-202ENST00000485275 PCP4P48539 62 aa7.54□□□□□ -1.2
LRIF1-202ENST00000485275 RNF213Q63HN8 5207 aa7.53□□□□□ -1.2
LRIF1-202ENST00000485275 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
LRIF1-202ENST00000485275 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
LRIF1-202ENST00000485275 HRES1P13985 223 aa7.48□□□□□ -1.21
LRIF1-202ENST00000485275 H7BZZ5 65 aa7.43□□□□□ -1.22
LRIF1-202ENST00000485275 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
LRIF1-202ENST00000485275 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
LRIF1-202ENST00000485275 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
LRIF1-202ENST00000485275 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
LRIF1-202ENST00000485275 NDUFC1O43677 76 aa7.35□□□□□ -1.23
LRIF1-202ENST00000485275 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.24
LRIF1-202ENST00000485275 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
LRIF1-202ENST00000485275 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
LRIF1-202ENST00000485275 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
LRIF1-202ENST00000485275 RBM12B-AS1Q9P1G2 102 aa7.26□□□□□ -1.25
LRIF1-202ENST00000485275 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
LRIF1-202ENST00000485275 TMEM258P61165 79 aa7.24□□□□□ -1.25
LRIF1-202ENST00000485275 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
LRIF1-202ENST00000485275 FAM236DA0A1B0GTK5 79 aa7.23□□□□□ -1.25
LRIF1-202ENST00000485275 FAM236CP0DP71 79 aa7.23□□□□□ -1.25
LRIF1-202ENST00000485275 A8MUN3 132 aa7.19□□□□□ -1.26
LRIF1-202ENST00000485275 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
LRIF1-202ENST00000485275 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms