RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
ITGB1-213ENST00000484088 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
ITGB1-213ENST00000484088 CHD6Q8TD26 2715 aa0.59□□□□□ -2.32
ITGB1-213ENST00000484088 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.32
ITGB1-213ENST00000484088 TTC28Q96AY4 2481 aa0.59□□□□□ -2.32
ITGB1-213ENST00000484088 AKAP13Q12802 2813 aa0.59□□□□□ -2.32
ITGB1-213ENST00000484088 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.32
ITGB1-213ENST00000484088 EP300Q09472 2414 aaPredicted RBP0.58□□□□□ -2.32
ITGB1-213ENST00000484088 HIVEP3Q5T1R4 2406 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 BDP1A6H8Y1 2624 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 WDR87Q6ZQQ6 2873 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 FAM186AA6NE01 2351 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 EPG5Q9HCE0 2579 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 VWFP04275 2813 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
ITGB1-213ENST00000484088 SETD2Q9BYW2 2564 aaPredicted RBP0.57□□□□□ -2.32
ITGB1-213ENST00000484088 TENM2Q9NT68 2774 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 COL6A5A8TX70 2615 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 OTOGQ6ZRI0 2925 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 HTN3P15516 51 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 POLQO75417 2590 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 CCDC168Q8NDH2 2452 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 CRYBG3Q68DQ2 2970 aa0.57□□□□□ -2.32
ITGB1-213ENST00000484088 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 CHD9Q3L8U1 2897 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 CSMD3Q7Z407 3707 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 TENM4Q6N022 2769 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 LRRK2Q5S007 2527 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 ATRQ13535 2644 aa0.56□□□□□ -2.32
ITGB1-213ENST00000484088 CHD8Q9HCK8 2581 aa0.55□□□□□ -2.32
ITGB1-213ENST00000484088 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
ITGB1-213ENST00000484088 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
ITGB1-213ENST00000484088 U3KQA8 63 aa0.55□□□□□ -2.32
ITGB1-213ENST00000484088 APCP25054 2843 aa0.55□□□□□ -2.32
ITGB1-213ENST00000484088 SONP18583 2426 aaKnown RBP0.54□□□□□ -2.32
ITGB1-213ENST00000484088 MTORP42345 2549 aa0.54□□□□□ -2.32
ITGB1-213ENST00000484088 PIEZO1Q92508 2521 aa0.54□□□□□ -2.32
ITGB1-213ENST00000484088 CELSR1Q9NYQ6 3014 aa0.54□□□□□ -2.32
ITGB1-213ENST00000484088 AKAP9Q99996 3911 aa0.54□□□□□ -2.32
ITGB1-213ENST00000484088 UTP20O75691 2785 aaKnown RBP0.54□□□□□ -2.32
ITGB1-213ENST00000484088 MAP1AP78559 2803 aaPredicted RBP0.54□□□□□ -2.32
ITGB1-213ENST00000484088 ACANP16112 2415 aa0.54□□□□□ -2.32
ITGB1-213ENST00000484088 TNRC18O15417 2968 aaPredicted RBP0.54□□□□□ -2.32
ITGB1-213ENST00000484088 ZFHX4Q86UP3 3567 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 USP9YO00507 2555 aaPredicted RBP0.53□□□□□ -2.32
ITGB1-213ENST00000484088 NBPF19A0A087WUL8 3843 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 VPS13DQ5THJ4 4388 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 PTPN13Q12923 2485 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 CACNA1AO00555 2505 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 KRTAP5-10Q6L8G5 202 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 KRTAP8-1Q8IUC2 63 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 SMR3AQ99954 134 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
ITGB1-213ENST00000484088 FRYLO94915 3013 aa0.53□□□□□ -2.33
ITGB1-213ENST00000484088 DNAH11Q96DT5 4516 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 ANK2Q01484 3957 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 ITPR3Q14573 2671 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 FLNCQ14315 2725 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 ITPR1Q14643 2758 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 NIPBLQ6KC79 2804 aaeCLIP0.52□□□□□ -2.33
ITGB1-213ENST00000484088 CEP350Q5VT06 3117 aa0.52□□□□□ -2.33
ITGB1-213ENST00000484088 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 NF1P21359 2839 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 ZFYVE26Q68DK2 2539 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 GPR98Q8WXG9 6306 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 VPS13BQ7Z7G8 4022 aa0.51□□□□□ -2.33
ITGB1-213ENST00000484088 SPG11Q96JI7 2443 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 SPENQ96T58 3664 aaKnown RBP0.5□□□□□ -2.33
ITGB1-213ENST00000484088 SRCAPQ6ZRS2 3230 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 TRIOO75962 3097 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 CFAP54Q96N23 3096 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 GCN1Q92616 2671 aaKnown RBP0.5□□□□□ -2.33
ITGB1-213ENST00000484088 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
ITGB1-213ENST00000484088 DEFB4AO15263 64 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 DMDP11532 3685 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 COL6A3P12111 3177 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 PRUNE2Q8WUY3 3088 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 SZT2Q5T011 3432 aa0.5□□□□□ -2.33
ITGB1-213ENST00000484088 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
ITGB1-213ENST00000484088 BSNQ9UPA5 3926 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 LYSTQ99698 3801 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 SMG1Q96Q15 3661 aaKnown RBP0.49□□□□□ -2.33
ITGB1-213ENST00000484088 SPTBN5Q9NRC6 3674 aaKnown RBP0.49□□□□□ -2.33
ITGB1-213ENST00000484088 NBEAQ8NFP9 2946 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 LRBAP50851 2863 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
ITGB1-213ENST00000484088 CENPEQ02224 2701 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
ITGB1-213ENST00000484088 KMT2AQ03164 3969 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 COL12A1Q99715 3063 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 LAMA5O15230 3695 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 COL7A1Q02388 2944 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
ITGB1-213ENST00000484088 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 997.1 ms