RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
APTX-223ENST00000479656 C1orf195Q5TG92 126 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 PRO0628Q9UI54 55 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 HERC2O95714 4834 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 A0A087WVE0 104 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 K7EQZ3 153 aa6.39□□□□□ -1.39
APTX-223ENST00000479656 OXTP01178 125 aa6.38□□□□□ -1.39
APTX-223ENST00000479656 SEC61GP60059 68 aa6.37□□□□□ -1.39
APTX-223ENST00000479656 TNXBP22105 4242 aa6.37□□□□□ -1.39
APTX-223ENST00000479656 A8MWP4 228 aa6.36□□□□□ -1.39
APTX-223ENST00000479656 TMEM258P61165 79 aa6.36□□□□□ -1.39
APTX-223ENST00000479656 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
APTX-223ENST00000479656 NDUFB1O75438 58 aa6.34□□□□□ -1.39
APTX-223ENST00000479656 PRR15Q8IV56 129 aa6.34□□□□□ -1.39
APTX-223ENST00000479656 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
APTX-223ENST00000479656 COX7CP15954 63 aa6.34□□□□□ -1.39
APTX-223ENST00000479656 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
APTX-223ENST00000479656 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
APTX-223ENST00000479656 FAM236AA0A1B0GUQ0 79 aa6.32□□□□□ -1.4
APTX-223ENST00000479656 FAM236BA0A1B0GV22 79 aa6.32□□□□□ -1.4
APTX-223ENST00000479656 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
APTX-223ENST00000479656 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
APTX-223ENST00000479656 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
APTX-223ENST00000479656 V9GYY9 64 aa6.3□□□□□ -1.4
APTX-223ENST00000479656 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
APTX-223ENST00000479656 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
APTX-223ENST00000479656 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
APTX-223ENST00000479656 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
APTX-223ENST00000479656 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
APTX-223ENST00000479656 ATOX1O00244 68 aa6.27□□□□□ -1.41
APTX-223ENST00000479656 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
APTX-223ENST00000479656 LINC00313P59037 77 aa6.25□□□□□ -1.41
APTX-223ENST00000479656 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
APTX-223ENST00000479656 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
APTX-223ENST00000479656 LCE2BO14633 110 aa6.24□□□□□ -1.41
APTX-223ENST00000479656 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
APTX-223ENST00000479656 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
APTX-223ENST00000479656 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
APTX-223ENST00000479656 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
APTX-223ENST00000479656 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
APTX-223ENST00000479656 IGLV7-46A0A075B6I9 117 aa6.19□□□□□ -1.42
APTX-223ENST00000479656 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
APTX-223ENST00000479656 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
APTX-223ENST00000479656 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
APTX-223ENST00000479656 PRR4Q16378 134 aa6.18□□□□□ -1.42
APTX-223ENST00000479656 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
APTX-223ENST00000479656 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
APTX-223ENST00000479656 NDUFS5O43920 106 aa6.16□□□□□ -1.42
APTX-223ENST00000479656 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
APTX-223ENST00000479656 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
APTX-223ENST00000479656 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
APTX-223ENST00000479656 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
APTX-223ENST00000479656 TRAV7A0A075B6U4 112 aa6.13□□□□□ -1.43
APTX-223ENST00000479656 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
APTX-223ENST00000479656 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
APTX-223ENST00000479656 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
APTX-223ENST00000479656 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
APTX-223ENST00000479656 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
APTX-223ENST00000479656 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
APTX-223ENST00000479656 A8MUU9 505 aa6.07□□□□□ -1.44
APTX-223ENST00000479656 Q5W150 140 aa6.07□□□□□ -1.44
APTX-223ENST00000479656 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
APTX-223ENST00000479656 XP32Q5T750 250 aa6.06□□□□□ -1.44
APTX-223ENST00000479656 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
APTX-223ENST00000479656 H0Y9P7 68 aa6.05□□□□□ -1.44
APTX-223ENST00000479656 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
APTX-223ENST00000479656 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
APTX-223ENST00000479656 Q75L30 129 aa6.03□□□□□ -1.44
APTX-223ENST00000479656 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
APTX-223ENST00000479656 MP68P56378 58 aa6.02□□□□□ -1.44
APTX-223ENST00000479656 PMAIP1Q13794 54 aa6.02□□□□□ -1.44
APTX-223ENST00000479656 LPAP08519 4548 aa6.02□□□□□ -1.45
APTX-223ENST00000479656 LINC00208Q96KT6 92 aa6.02□□□□□ -1.45
APTX-223ENST00000479656 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
APTX-223ENST00000479656 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
APTX-223ENST00000479656 H7BZZ5 65 aa6□□□□□ -1.45
APTX-223ENST00000479656 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
APTX-223ENST00000479656 A0A0U1RQV1 116 aa6□□□□□ -1.45
APTX-223ENST00000479656 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
APTX-223ENST00000479656 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
APTX-223ENST00000479656 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
APTX-223ENST00000479656 HERC1Q15751 4861 aa5.98□□□□□ -1.45
APTX-223ENST00000479656 H3BPC8 53 aa5.97□□□□□ -1.45
APTX-223ENST00000479656 NDUFC1O43677 76 aa5.97□□□□□ -1.45
APTX-223ENST00000479656 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
APTX-223ENST00000479656 LRP2P98164 4655 aa5.95□□□□□ -1.46
APTX-223ENST00000479656 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
APTX-223ENST00000479656 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
APTX-223ENST00000479656 LOC101927531A0A1B0GV80 90 aa5.93□□□□□ -1.46
APTX-223ENST00000479656 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
APTX-223ENST00000479656 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
APTX-223ENST00000479656 SPINK7P58062 85 aa5.89□□□□□ -1.47
APTX-223ENST00000479656 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
APTX-223ENST00000479656 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
APTX-223ENST00000479656 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
APTX-223ENST00000479656 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
APTX-223ENST00000479656 HRES1P13985 223 aa5.83□□□□□ -1.48
APTX-223ENST00000479656 Q1T7F1 81 aa5.8□□□□□ -1.48
APTX-223ENST00000479656 H3BS24 57 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms